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Spg031016 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031016
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionB3 domain-containing protein
Genome locationscaffold10:22710923..22713500
RNA-Seq ExpressionSpg031016
SyntenySpg031016
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR015300 - DNA-binding pseudobarrel domain superfamily
IPR044800 - B3 domain-containing transcription factor LEC2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG0490256.1 hypothetical protein HPP92_007119 [Vanilla planifolia]1.5e-1966.27Show/hide
Query:  EKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDRPEWKIMAVSLLLLDKEPELRDDQRLEPLRQREK
        EKEHMF+KVVTPS+V KLNRLVI KQH  +YFPLDSS+++KGLLL+FEDR   K+      LL+ +PELR DQR+EPLR+RE+
Subjt:  EKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDRPEWKIMAVSLLLLDKEPELRDDQRLEPLRQREK

XP_017409735.1 PREDICTED: B3 domain-containing transcription factor NGA1 [Vigna angularis]2.0e-1681.36Show/hide
Query:  THSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR
        T SN+  + EKEHMFDKVVTPS+V KLNRLVI KQH  KYFPLDSSSNEKGLLLNFEDR
Subjt:  THSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR

XP_019170329.1 PREDICTED: B3 domain-containing protein Os03g0120900-like [Ipomoea nil]1.5e-1682.46Show/hide
Query:  SNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR
        S+S +L EKEHMFDKVVTPS+V KLNRLVI KQH  KYFPLDSS+NEKGLLLNFEDR
Subjt:  SNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR

XP_020083862.1 B3 domain-containing protein Os02g0683500-like [Ananas comosus]1.4e-1771.05Show/hide
Query:  VTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDRPEWKIMAVSLLLLDKEPELRDDQRLEPLRQREKTR
        VTPS+V KLNRLVI KQH  KYFPLD+SSNEKGLLL+FE RP  + +A+ LLLL+++PELR DQRLEPLRQ E  R
Subjt:  VTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDRPEWKIMAVSLLLLDKEPELRDDQRLEPLRQREKTR

XP_031131074.1 B3 domain-containing protein Os03g0120900-like [Ipomoea triloba]1.5e-1682.46Show/hide
Query:  SNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR
        S+S +L EKEHMFDKVVTPS+V KLNRLVI KQH  KYFPLDSS+NEKGLLLNFEDR
Subjt:  SNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR

TrEMBL top hitse value%identityAlignment
A0A0L9TFB6 TF-B3 domain-containing protein9.7e-1781.36Show/hide
Query:  THSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR
        T SN+  + EKEHMFDKVVTPS+V KLNRLVI KQH  KYFPLDSSSNEKGLLLNFEDR
Subjt:  THSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR

A0A0S3RIC0 TF-B3 domain-containing protein9.7e-1781.36Show/hide
Query:  THSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR
        T SN+  + EKEHMFDKVVTPS+V KLNRLVI KQH  KYFPLDSSSNEKGLLLNFEDR
Subjt:  THSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR

A0A1S3TZ91 B3 domain-containing transcription factor NGA19.7e-1781.36Show/hide
Query:  THSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR
        T SN+  + EKEHMFDKVVTPS+V KLNRLVI KQH  KYFPLDSSSNEKGLLLNFEDR
Subjt:  THSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR

A0A4D6NKC5 RAV-like factor9.7e-1781.36Show/hide
Query:  THSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR
        T SN+  + EKEHMFDKVVTPS+V KLNRLVI KQH  KYFPLDSSSNEKGLLLNFEDR
Subjt:  THSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR

A0A6P5EKA6 B3 domain-containing protein Os02g0683500-like6.7e-1871.05Show/hide
Query:  VTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDRPEWKIMAVSLLLLDKEPELRDDQRLEPLRQREKTR
        VTPS+V KLNRLVI KQH  KYFPLD+SSNEKGLLL+FE RP  + +A+ LLLL+++PELR DQRLEPLRQ E  R
Subjt:  VTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDRPEWKIMAVSLLLLDKEPELRDDQRLEPLRQREKTR

SwissProt top hitse value%identityAlignment
O82799 B3 domain-containing transcription factor NGA19.3e-1780.39Show/hide
Query:  LAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFED
        +A++EHMFDKVVTPS+V KLNRLVI KQH  ++FPLDSSSNEKGLLLNFED
Subjt:  LAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFED

Q6EU30 B3 domain-containing protein Os02g06835009.3e-1778.85Show/hide
Query:  LAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR
        + EKEHMFDKVVTPS+V KLNRLVI KQ+  KYFPLD+++NEKGLLLNFEDR
Subjt:  LAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR

Q7F9W2 B3 domain-containing protein Os04g05814005.5e-1784Show/hide
Query:  EKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR
        EKEHMFDKVVTPS+V KLNRLVI KQH  KYFPLDS++NEKGLLL+FEDR
Subjt:  EKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR

Q8LMR9 B3 domain-containing protein Os03g01209005.5e-1784Show/hide
Query:  EKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR
        EKEHMFDKVVTPS+V KLNRLVI KQH  KYFPLD++SNEKGLLL+FEDR
Subjt:  EKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR

Q9MAN1 B3 domain-containing transcription factor NGA31.0e-1578Show/hide
Query:  EKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR
        EKEHMFDKVVTPS+V KLNRLVI KQH  +YFPLDSS+N+ G LLNF+DR
Subjt:  EKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR

Arabidopsis top hitse value%identityAlignment
AT1G01030.1 AP2/B3-like transcriptional factor family protein7.3e-1778Show/hide
Query:  EKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR
        EKEHMFDKVVTPS+V KLNRLVI KQH  +YFPLDSS+N+ G LLNF+DR
Subjt:  EKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDR

AT2G46870.1 AP2/B3-like transcriptional factor family protein6.6e-1880.39Show/hide
Query:  LAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFED
        +A++EHMFDKVVTPS+V KLNRLVI KQH  ++FPLDSSSNEKGLLLNFED
Subjt:  LAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFED

AT3G11580.1 AP2/B3-like transcriptional factor family protein4.2e-1250Show/hide
Query:  HSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSN-----------EKGLLLNFED
        H N   +A++E +F+K +TPS+V KLNRLVI KQH  KYFPL++++N           EKG+LL+FED
Subjt:  HSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSN-----------EKGLLLNFED

AT3G11580.2 AP2/B3-like transcriptional factor family protein4.2e-1250Show/hide
Query:  HSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSN-----------EKGLLLNFED
        H N   +A++E +F+K +TPS+V KLNRLVI KQH  KYFPL++++N           EKG+LL+FED
Subjt:  HSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSN-----------EKGLLLNFED

AT3G61970.1 AP2/B3-like transcriptional factor family protein3.1e-1573.58Show/hide
Query:  EKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSS---NEKGLLLNFEDR
        E+EHMFDKVVTPS+V KLNRLVI KQH  +YFPLD+S+   + KGLLLNFEDR
Subjt:  EKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSS---NEKGLLLNFEDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACAGCGTCAGAGTCACTCTGGTGCCCAGGTCTGGCAAAGGGCTCCTACAGTTTCTGGAGATCCATCTTCTTCGTCTTCTTCAAAACCCACTCGAATTCATGGAT
TTTGGCAGAGAAAGAACACATGTTCGACAAGGTTGTGACTCCAAGCAATGTGGAAAAATTAAATCGCTTAGTGATCCTAAAGCAGCACACGGGGAAGTACTTTCCACTGG
ATTCTTCATCGAACGAGAAGGGTCTTCTCCTAAACTTCGAAGATCGGCCAGAGTGGAAAATCATGGCGGTTTCGTTACTCTTATTGGACAAGGAACCAGAGCTACGTGAT
GACCAGAGGCTGGAGCCGCTTCGTCAACGAGAAAAGACTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACGACAGCGTCAGAGTCACTCTGGTGCCCAGGTCTGGCAAAGGGCTCCTACAGTTTCTGGAGATCCATCTTCTTCGTCTTCTTCAAAACCCACTCGAATTCATGGAT
TTTGGCAGAGAAAGAACACATGTTCGACAAGGTTGTGACTCCAAGCAATGTGGAAAAATTAAATCGCTTAGTGATCCTAAAGCAGCACACGGGGAAGTACTTTCCACTGG
ATTCTTCATCGAACGAGAAGGGTCTTCTCCTAAACTTCGAAGATCGGCCAGAGTGGAAAATCATGGCGGTTTCGTTACTCTTATTGGACAAGGAACCAGAGCTACGTGAT
GACCAGAGGCTGGAGCCGCTTCGTCAACGAGAAAAGACTCGATGA
Protein sequenceShow/hide protein sequence
MTTASESLWCPGLAKGSYSFWRSIFFVFFKTHSNSWILAEKEHMFDKVVTPSNVEKLNRLVILKQHTGKYFPLDSSSNEKGLLLNFEDRPEWKIMAVSLLLLDKEPELRD
DQRLEPLRQREKTR