; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031109 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031109
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold8:30417169..30421219
RNA-Seq ExpressionSpg031109
SyntenySpg031109
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]9.6e-2533.45Show/hide
Query:  GHKTQQEEDSRRDCQRRVEDEDIEELIGQLESPFTDEIME----GEVPHKF-----KEERERRGVS-----------VYDRH-------------REDRG
        G    + E S +   ++ +  D+EEL+ Q +SPFT+EIM      E  H +     KE+ +  G++           V D H              E   
Subjt:  GHKTQQEEDSRRDCQRRVEDEDIEELIGQLESPFTDEIME----GEVPHKF-----KEERERRGVS-----------VYDRH-------------REDRG

Query:  KRRRVEDSGQERHGHSSANGRGRAEIKELQG---------------RAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHG
        + +R   +G+  +    +NG+   + +E  G               + +P  KF +YT  T PLEQVL  I++  LLK PERM +   +R++ +YC+FH 
Subjt:  KRRRVEDSGQERHGHSSANGRGRAEIKELQG---------------RAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHG

Query:  DHGHTTRECIQLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEA
        DHGH T++C  L++E+E LI  GYLKE+V++       T  G+   +P  EIRTI+GGP   ES RKRK  V+EA
Subjt:  DHGHTTRECIQLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEA

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.5e-2537.17Show/hide
Query:  GGRKRARPVSKAEQGQKWREQELSHYIHYLRVLGHKTQQE----EDSRRDCQRRVEDEDIEELIGQLESPFTDEIMEGEVPHKFKE--ERERRGVSV---
        GGR R+RPV+     ++   + L  Y+   R    K Q E      S       V DE +    G+              P+ F E   R +R +S    
Subjt:  GGRKRARPVSKAEQGQKWREQELSHYIHYLRVLGHKTQQE----EDSRRDCQRRVEDEDIEELIGQLESPFTDEIMEGEVPHKFKE--ERERRGVSV---

Query:  YDRHREDRGKRRRVEDSGQERHGHSSANGRGRAEIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTT
        +   RE  GKR    D  +ER G      R   E ++   + +P  KF +YTP T P+EQVL  I+D  LLK PERM++   +R++ +YC+FH DHGH T
Subjt:  YDRHREDRGKRRRVEDSGQERHGHSSANGRGRAEIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTT

Query:  RECIQLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEA
        ++C  L++E+E LIR GYLKE+V++       T  G+   +P  EIRTI+GGP   ES RKRKA V+EA
Subjt:  RECIQLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEA

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]8.7e-2644.85Show/hide
Query:  REDRGKRRRVEDSGQERHGHSSANGRGRAEIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTTRECI
        +E  GKR    D  +ER G    + +   +   + G+ +   KF +YTP T PLEQVL  I+D  LLK PE M++ P++R++ +YC+FH DHGH T +C 
Subjt:  REDRGKRRRVEDSGQERHGHSSANGRGRAEIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTTRECI

Query:  QLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEA
         L++E+E LIR+GYLKE+V D   ++TP ++     +P  EIRTI+GG +  ES RKRKA+V+EA
Subjt:  QLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEA

XP_023916366.1 uncharacterized protein LOC112027956 [Quercus suber]4.8e-2445.45Show/hide
Query:  KRRRVE-----DSGQERHGHSSANGRGRAEIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTTRECI
        KR+R+E        Q   G     GR + + K+   +A P A+  +YTPL  PLEQVL  I+D   LK PE+MR DP++RNRSKYC FH DHGH T EC 
Subjt:  KRRRVE-----DSGQERHGHSSANGRGRAEIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTTRECI

Query:  QLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPL-EIRTILGGPSGGESSRKRKAAVQE
         L+ +IE LIR+G LK F+    K      + +  + PPL EIR I+GG S G+SS  +KA ++E
Subjt:  QLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPL-EIRTILGGPSGGESSRKRKAAVQE

XP_030936700.1 uncharacterized protein LOC115961955 [Quercus lobata]1.2e-2244.65Show/hide
Query:  KRRRVE--DSGQERHGHSSAN-GRGRAEIKELQGR-AEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTTRECIQ
        KR+++E  D+   RH     +  +GR E K+ + R A P  +  +YTPL  PL+QVL  I+D   LK PE+M+ DP++RNR+KYC FH DHGH T EC  
Subjt:  KRRRVE--DSGQERHGHSSAN-GRGRAEIKELQGR-AEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTTRECIQ

Query:  LRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPL-EIRTILGGPSGGESSRKRK
        L+ +IE LIR+G L+ F+    K      + +  + PPL EIR I+GG S  +SSR RK
Subjt:  LRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPL-EIRTILGGPSGGESSRKRK

TrEMBL top hitse value%identityAlignment
A0A2N9F6A1 Ribonuclease H1.4e-2141.73Show/hide
Query:  EIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVQDKGKRSTPT
        E  E +    P  KF+ +TPL  P++++L  IQ+   L+ P ++RSDP+ R ++ YC FH DHGH T +C+ L++++ETLIR+G L+++VQ       P 
Subjt:  EIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTTRECIQLRDEIETLIREGYLKEFVQDKGKRSTPT

Query:  DQGKGGNNPP---LEIRTILGGP-SGGESSRKRKAAVQE
         +G+   N P    EIRTI+GGP SGG S   RKA  ++
Subjt:  DQGKGGNNPP---LEIRTILGGP-SGGESSRKRKAAVQE

A0A6J1CNT2 uncharacterized protein LOC1110128054.6e-2533.45Show/hide
Query:  GHKTQQEEDSRRDCQRRVEDEDIEELIGQLESPFTDEIME----GEVPHKF-----KEERERRGVS-----------VYDRH-------------REDRG
        G    + E S +   ++ +  D+EEL+ Q +SPFT+EIM      E  H +     KE+ +  G++           V D H              E   
Subjt:  GHKTQQEEDSRRDCQRRVEDEDIEELIGQLESPFTDEIME----GEVPHKF-----KEERERRGVS-----------VYDRH-------------REDRG

Query:  KRRRVEDSGQERHGHSSANGRGRAEIKELQG---------------RAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHG
        + +R   +G+  +    +NG+   + +E  G               + +P  KF +YT  T PLEQVL  I++  LLK PERM +   +R++ +YC+FH 
Subjt:  KRRRVEDSGQERHGHSSANGRGRAEIKELQG---------------RAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHG

Query:  DHGHTTRECIQLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEA
        DHGH T++C  L++E+E LI  GYLKE+V++       T  G+   +P  EIRTI+GGP   ES RKRK  V+EA
Subjt:  DHGHTTRECIQLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEA

A0A6J1DWY0 uncharacterized protein LOC1110252931.2e-2537.17Show/hide
Query:  GGRKRARPVSKAEQGQKWREQELSHYIHYLRVLGHKTQQE----EDSRRDCQRRVEDEDIEELIGQLESPFTDEIMEGEVPHKFKE--ERERRGVSV---
        GGR R+RPV+     ++   + L  Y+   R    K Q E      S       V DE +    G+              P+ F E   R +R +S    
Subjt:  GGRKRARPVSKAEQGQKWREQELSHYIHYLRVLGHKTQQE----EDSRRDCQRRVEDEDIEELIGQLESPFTDEIMEGEVPHKFKE--ERERRGVSV---

Query:  YDRHREDRGKRRRVEDSGQERHGHSSANGRGRAEIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTT
        +   RE  GKR    D  +ER G      R   E ++   + +P  KF +YTP T P+EQVL  I+D  LLK PERM++   +R++ +YC+FH DHGH T
Subjt:  YDRHREDRGKRRRVEDSGQERHGHSSANGRGRAEIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTT

Query:  RECIQLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEA
        ++C  L++E+E LIR GYLKE+V++       T  G+   +P  EIRTI+GGP   ES RKRKA V+EA
Subjt:  RECIQLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEA

A0A6J1DYL6 uncharacterized protein LOC1110257857.4e-2334.59Show/hide
Query:  GGRKRARPVSKAEQGQKWREQELSHYIHYLRVLGHKTQQEEDSRRDC------QRRVEDEDIEELIGQLESPFTDEIMEGEVPHKFKEERERRGVSVYDR
        GGR R+RPV+     ++   + L  Y+       +K + + +S  D          V DE +    G+       E +        + +R       +  
Subjt:  GGRKRARPVSKAEQGQKWREQELSHYIHYLRVLGHKTQQEEDSRRDC------QRRVEDEDIEELIGQLESPFTDEIMEGEVPHKFKEERERRGVSVYDR

Query:  HREDRGKRRRVEDSGQERHGHSSANGRGRAEIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTTREC
         RE  GKR    D  +ER G      R   E ++   + +P  KF +YTP T PLEQVL  I+D  LLK PERM+    +R++ +YC+FH DH H T++ 
Subjt:  HREDRGKRRRVEDSGQERHGHSSANGRGRAEIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTTREC

Query:  IQLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEA
          L++E+E LIR GYL+E+V++       T  G+   +P  EIRTI+GGP   ES+RKRKA V+EA
Subjt:  IQLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEA

A0A6J1DZ52 uncharacterized protein LOC1110256124.2e-2644.85Show/hide
Query:  REDRGKRRRVEDSGQERHGHSSANGRGRAEIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTTRECI
        +E  GKR    D  +ER G    + +   +   + G+ +   KF +YTP T PLEQVL  I+D  LLK PE M++ P++R++ +YC+FH DHGH T +C 
Subjt:  REDRGKRRRVEDSGQERHGHSSANGRGRAEIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTTRECI

Query:  QLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEA
         L++E+E LIR+GYLKE+V D   ++TP ++     +P  EIRTI+GG +  ES RKRKA+V+EA
Subjt:  QLRDEIETLIREGYLKEFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCACCAAGATCAACCGGAGGTAGACGAGCAGAATCCCCAAGTTCGATTCCAGTCCCAGGAGGTCGAGATCGCAGCAATTAAGGGGAGGATGAACGAGATGGGCCA
AAGCCTGACTGAAATACTTAGTCTATTAAAGAAACCGGGGCCTGTAGGGCTCGGGGAAGAGCATCTGCGCAGAGATCCCAAAAAGGGCAAAGGAATAGAAGACGAGGAGG
TAGGGGATTCGGAGAGTGTAACAAGCCGAATGCACCATCCGGGGAATGATCGGACCCGGAGAGAAGCGGGACCTAGCCACCAGAAGCTCCGTGGGGATTCGCCGCCAAAG
TCAATGTCGGGCGTGTATGCAGAGAATGGTGGCAGGAAAAGGGCTCGACCAGTGTCCAAGGCCGAGCAGGGCCAGAAGTGGCGAGAGCAGGAGCTGTCTCATTACATTCA
CTATCTACGAGTTTTAGGGCATAAAACCCAACAAGAAGAAGACAGCCGTCGCGACTGCCAGAGGAGAGTTGAGGATGAAGACATAGAGGAGCTGATCGGGCAGTTGGAGT
CGCCCTTCACCGATGAGATAATGGAGGGGGAAGTACCCCATAAATTTAAGGAAGAAAGGGAGAGGCGGGGAGTTTCGGTGTATGACCGACATAGAGAGGATAGAGGAAAA
AGGCGCCGGGTAGAAGACAGCGGCCAAGAGCGACACGGACACTCCTCGGCCAATGGCCGAGGCAGAGCAGAAATCAAAGAACTGCAAGGCAGGGCCGAGCCGAAAGCCAA
GTTCAACAGGTACACACCGCTAACAGCTCCACTGGAACAGGTGTTAACCGCAATTCAGGACACAAATCTGTTGAAGCGCCCGGAAAGGATGAGGTCAGATCCAGACAGGA
GAAATAGAAGTAAATACTGCATGTTCCACGGGGACCACGGCCACACAACCCGGGAATGCATACAATTGAGGGATGAAATAGAAACCCTAATTCGAGAAGGCTATCTCAAG
GAATTCGTACAAGACAAAGGGAAGAGATCAACACCAACAGACCAAGGTAAAGGAGGCAACAACCCCCCACTGGAGATACGAACCATCCTTGGAGGACCCTCGGGGGGGGA
GTCGAGTAGAAAGCGGAAAGCGGCGGTTCAAGAGGCTTGGATAGAGCCAACGAAGCGAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCACCAAGATCAACCGGAGGTAGACGAGCAGAATCCCCAAGTTCGATTCCAGTCCCAGGAGGTCGAGATCGCAGCAATTAAGGGGAGGATGAACGAGATGGGCCA
AAGCCTGACTGAAATACTTAGTCTATTAAAGAAACCGGGGCCTGTAGGGCTCGGGGAAGAGCATCTGCGCAGAGATCCCAAAAAGGGCAAAGGAATAGAAGACGAGGAGG
TAGGGGATTCGGAGAGTGTAACAAGCCGAATGCACCATCCGGGGAATGATCGGACCCGGAGAGAAGCGGGACCTAGCCACCAGAAGCTCCGTGGGGATTCGCCGCCAAAG
TCAATGTCGGGCGTGTATGCAGAGAATGGTGGCAGGAAAAGGGCTCGACCAGTGTCCAAGGCCGAGCAGGGCCAGAAGTGGCGAGAGCAGGAGCTGTCTCATTACATTCA
CTATCTACGAGTTTTAGGGCATAAAACCCAACAAGAAGAAGACAGCCGTCGCGACTGCCAGAGGAGAGTTGAGGATGAAGACATAGAGGAGCTGATCGGGCAGTTGGAGT
CGCCCTTCACCGATGAGATAATGGAGGGGGAAGTACCCCATAAATTTAAGGAAGAAAGGGAGAGGCGGGGAGTTTCGGTGTATGACCGACATAGAGAGGATAGAGGAAAA
AGGCGCCGGGTAGAAGACAGCGGCCAAGAGCGACACGGACACTCCTCGGCCAATGGCCGAGGCAGAGCAGAAATCAAAGAACTGCAAGGCAGGGCCGAGCCGAAAGCCAA
GTTCAACAGGTACACACCGCTAACAGCTCCACTGGAACAGGTGTTAACCGCAATTCAGGACACAAATCTGTTGAAGCGCCCGGAAAGGATGAGGTCAGATCCAGACAGGA
GAAATAGAAGTAAATACTGCATGTTCCACGGGGACCACGGCCACACAACCCGGGAATGCATACAATTGAGGGATGAAATAGAAACCCTAATTCGAGAAGGCTATCTCAAG
GAATTCGTACAAGACAAAGGGAAGAGATCAACACCAACAGACCAAGGTAAAGGAGGCAACAACCCCCCACTGGAGATACGAACCATCCTTGGAGGACCCTCGGGGGGGGA
GTCGAGTAGAAAGCGGAAAGCGGCGGTTCAAGAGGCTTGGATAGAGCCAACGAAGCGAGGATAA
Protein sequenceShow/hide protein sequence
MEHQDQPEVDEQNPQVRFQSQEVEIAAIKGRMNEMGQSLTEILSLLKKPGPVGLGEEHLRRDPKKGKGIEDEEVGDSESVTSRMHHPGNDRTRREAGPSHQKLRGDSPPK
SMSGVYAENGGRKRARPVSKAEQGQKWREQELSHYIHYLRVLGHKTQQEEDSRRDCQRRVEDEDIEELIGQLESPFTDEIMEGEVPHKFKEERERRGVSVYDRHREDRGK
RRRVEDSGQERHGHSSANGRGRAEIKELQGRAEPKAKFNRYTPLTAPLEQVLTAIQDTNLLKRPERMRSDPDRRNRSKYCMFHGDHGHTTRECIQLRDEIETLIREGYLK
EFVQDKGKRSTPTDQGKGGNNPPLEIRTILGGPSGGESSRKRKAAVQEAWIEPTKRG