; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031111 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031111
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold8:28564539..28574518
RNA-Seq ExpressionSpg031111
SyntenySpg031111
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]1.4e-0942.48Show/hide
Query:  KTPKNQLRSKETQREDSQTPV-IANKMLRRMTESAQFEIATAENLMLGKFISLSQQP-YETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLRMVEEKDQ
        K P  + RS+E Q  +   P  +A  +  ++++  +  I   EN  + +  SLS++   E   P++MSVM+TD  TSE+RMAE+EKK++ML++ VEE+D 
Subjt:  KTPKNQLRSKETQREDSQTPV-IANKMLRRMTESAQFEIATAENLMLGKFISLSQQP-YETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLRMVEEKDQ

Query:  EIASLKNQMESRD
        EIA LKN +ESRD
Subjt:  EIASLKNQMESRD

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]8.5e-6346.46Show/hide
Query:  EDIPEIVACHAVNTFEEGDSSSSPSQNAKKESIEEVDACEVQPKEASTHPVKSKAPKEEAL-------SNVPILRYVPLSRRKKGESPFTECSGILKVGD
        ED+ EI++     T  +G   +       K+S  + DA   Q     T   K +AP+ E +       SN P+LRY+PLSRRKKGESPFTECS  L V +
Subjt:  EDIPEIVACHAVNTFEEGDSSSSPSQNAKKESIEEVDACEVQPKEASTHPVKSKAPKEEAL-------SNVPILRYVPLSRRKKGESPFTECSGILKVGD

Query:  VEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPP
         EILKENFT PLT I K E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKKLQK+GY+IP+SRAG+GY   
Subjt:  VEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPP

Query:  MSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR
          VRIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFDRI     R SV QR+  S ++   Q  T   TR S F RL+ S  K           +
Subjt:  MSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR

Query:  SVFDLLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTE
        S F  L  +  + + K     + +S  +  +    S  PSRMKRK FV +NTE
Subjt:  SVFDLLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTE

KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.7e-6939.14Show/hide
Query:  LQQESTIDIFQDQLESVENEDEGWTLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHE
        L++E T +  Q++   +E +DEGWT+VTRRKK+K   +Q+E  ++ NYRR N +QK K+K K +RK KLV E+++DF  ++  VTL DFFP  FL D  +
Subjt:  LQQESTIDIFQDQLESVENEDEGWTLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHE

Query:  DIPEIVACHAVNTFEEGDSSSSP------------------------------SQNAKKESIEEVDACEVQPK---------------------------
        + P +VA  + ++       S+P                               Q  ++  ++   A  + PK                           
Subjt:  DIPEIVACHAVNTFEEGDSSSSP------------------------------SQNAKKESIEEVDACEVQPK---------------------------

Query:  ------------------------------------------------------EASTHPVKSKAPKEEALSNVPILRYVPLSRRKKGESPFTECSGILK
                                                              EAST   KS    +E  SN PILRYVPLSRRKKGESPF E    LK
Subjt:  ------------------------------------------------------EASTHPVKSKAPKEEALSNVPILRYVPLSRRKKGESPFTECSGILK

Query:  VGDVEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGY
        VGD+E+LKE+FTTPLT ITKQEI   K D  +  LP+RRTK GFDP AYK + KAGYDFTTHTEFKSLKI + + +LS TQKKL +EG+AIP SR GLGY
Subjt:  VGDVEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGY

Query:  NPPMSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVS
         PP  +RITRK   KV D++HIT++E+   E+K+  DSQ+ S FDR+     R  V +RL    +E++    TS   RRS F RL+++
Subjt:  NPPMSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVS

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]8.5e-6346.46Show/hide
Query:  EDIPEIVACHAVNTFEEGDSSSSPSQNAKKESIEEVDACEVQPKEASTHPVKSKAPKEEAL-------SNVPILRYVPLSRRKKGESPFTECSGILKVGD
        ED+ EI++     T  +G   +       K+S  + DA   Q     T   K +AP+ E +       SN P+LRY+PLSRRKKGESPFTECS  L V +
Subjt:  EDIPEIVACHAVNTFEEGDSSSSPSQNAKKESIEEVDACEVQPKEASTHPVKSKAPKEEAL-------SNVPILRYVPLSRRKKGESPFTECSGILKVGD

Query:  VEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPP
         EILKENFT PLT I K E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKKLQK+GY+IP+SRAG+GY   
Subjt:  VEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPP

Query:  MSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR
          VRIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFDRI     R SV QR+  S ++   Q  T   TR S F RL+ S  K           +
Subjt:  MSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR

Query:  SVFDLLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTE
        S F  L  +  + + K     + +S  +  +    S  PSRMKRK FV +NTE
Subjt:  SVFDLLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTE

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]1.0e-0739.82Show/hide
Query:  KTPKNQLRSKETQREDSQTPV-IANKMLRRMTESAQFEIATAENLMLGKFISLSQQP-YETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLRMVEEKDQ
        K P  + RS+E Q  +   P  +A  + +++++  +  I   EN  + +  SLS++   E   P++MSVM+TD  TSE+RM  +EKK++M ++ VEE+D 
Subjt:  KTPKNQLRSKETQREDSQTPV-IANKMLRRMTESAQFEIATAENLMLGKFISLSQQP-YETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLRMVEEKDQ

Query:  EIASLKNQMESRD
        EIA LKN +ESRD
Subjt:  EIASLKNQMESRD

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]8.5e-6346.46Show/hide
Query:  EDIPEIVACHAVNTFEEGDSSSSPSQNAKKESIEEVDACEVQPKEASTHPVKSKAPKEEAL-------SNVPILRYVPLSRRKKGESPFTECSGILKVGD
        ED+ EI++     T  +G   +       K+S  + DA   Q     T   K +AP+ E +       SN P+LRY+PLSRRKKGESPFTECS  L V +
Subjt:  EDIPEIVACHAVNTFEEGDSSSSPSQNAKKESIEEVDACEVQPKEASTHPVKSKAPKEEAL-------SNVPILRYVPLSRRKKGESPFTECSGILKVGD

Query:  VEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPP
         EILKENFT PLT I K E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKKLQK+GY+IP+SRAG+GY   
Subjt:  VEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPP

Query:  MSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR
          VRIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFDRI     R SV QR+  S ++   Q  T   TR S F RL+ S  K           +
Subjt:  MSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR

Query:  SVFDLLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTE
        S F  L  +  + + K     + +S  +  +    S  PSRMKRK FV +NTE
Subjt:  SVFDLLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTE

TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.9e-7133.19Show/hide
Query:  MLLRMVEEKDQEIASLKNQMESRDFGTLEPIVIWLQQESTIDIFQDQLESVENEDEGWTLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRK
        ++LR+  EK       K +++  +FGT EP+V+   QE   +  Q++   +E +DE WT+VTRRKK+K   +Q+E   +RNYRR N +QK K+K K +RK
Subjt:  MLLRMVEEKDQEIASLKNQMESRDFGTLEPIVIWLQQESTIDIFQDQLESVENEDEGWTLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRK

Query:  PKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTFEEG-------------------------------------------------
         KL+ +E++DF  ++  +TL DFFP  FL D  ++ P +VACHA+N  EE                                                  
Subjt:  PKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTFEEG-------------------------------------------------

Query:  ------------------------------------------------------------------------------------------------DSSS
                                                                                                        ++ S
Subjt:  ------------------------------------------------------------------------------------------------DSSS

Query:  SPSQNA-----------KKESIEEVDACEV----------------------------QPKEASTHPVKSKAPKEEALSNVPILRYVPLSRRKKGESPFT
        +P   A           K +S  EV + EV                            +  EAST   KS    +E  SN  ILRYVPLSRRKKGESPF 
Subjt:  SPSQNA-----------KKESIEEVDACEV----------------------------QPKEASTHPVKSKAPKEEALSNVPILRYVPLSRRKKGESPFT

Query:  ECSGILKVGDVEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPS
        E    LKVGD+E+LKE+FTTPLT ITKQEI   K D T+  LP+RRTK  FDP AYKL+ KAGYDFTTHTEFKSLKI + + +LS TQKKL +EG+AIP 
Subjt:  ECSGILKVGDVEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPS

Query:  SRAGLGYNPPMSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSKKV
        SR GLGY  P  +RITRK   K+ D++HIT++E+ D   +K  DSQ+ S FDRI     R  V +RL  + +E++    TS   RRS F RLS++  K  
Subjt:  SRAGLGYNPPMSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSKKV

Query:  DEPLRSVFDLL-------------------QATNGQCKGKLKSLETEESD------EMNDNNGFSSTVPSRMKRKPFVLIN
          P   + + L                     +      ++K +  E         E+       S VPSRMKRK FV +N
Subjt:  DEPLRSVFDLL-------------------QATNGQCKGKLKSLETEESD------EMNDNNGFSSTVPSRMKRKPFVLIN

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]1.0e-0739.82Show/hide
Query:  KTPKNQLRSKETQREDSQTPV-IANKMLRRMTESAQFEIATAENLMLGKFISLSQQP-YETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLRMVEEKDQ
        K P  + RS++ Q  +   P  +A  +  ++++  +  I   EN  + +  SL ++   E S P++MSVM+TD  TSE+RMAE+EKK++ML++ VEE+D 
Subjt:  KTPKNQLRSKETQREDSQTPV-IANKMLRRMTESAQFEIATAENLMLGKFISLSQQP-YETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLRMVEEKDQ

Query:  EIASLKNQMESRD
         IA  KN +ESRD
Subjt:  EIASLKNQMESRD

TrEMBL top hitse value%identityAlignment
A0A5A7TZU9 Ribonuclease H4.1e-6346.46Show/hide
Query:  EDIPEIVACHAVNTFEEGDSSSSPSQNAKKESIEEVDACEVQPKEASTHPVKSKAPKEEAL-------SNVPILRYVPLSRRKKGESPFTECSGILKVGD
        ED+ EI++     T  +G   +       K+S  + DA   Q     T   K +AP+ E +       SN P+LRY+PLSRRKKGESPFTECS  L V +
Subjt:  EDIPEIVACHAVNTFEEGDSSSSPSQNAKKESIEEVDACEVQPKEASTHPVKSKAPKEEAL-------SNVPILRYVPLSRRKKGESPFTECSGILKVGD

Query:  VEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPP
         EILKENFT PLT I K E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKKLQK+GY+IP+SRAG+GY   
Subjt:  VEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPP

Query:  MSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR
          VRIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFDRI     R SV QR+  S ++   Q  T   TR S F RL+ S  K           +
Subjt:  MSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR

Query:  SVFDLLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTE
        S F  L  +  + + K     + +S  +  +    S  PSRMKRK FV +NTE
Subjt:  SVFDLLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTE

A0A5A7TZU9 Ribonuclease H6.9e-1042.48Show/hide
Query:  KTPKNQLRSKETQREDSQTPV-IANKMLRRMTESAQFEIATAENLMLGKFISLSQQP-YETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLRMVEEKDQ
        K P  + RS+E Q  +   P  +A  +  ++++  +  I   EN  + +  SLS++   E   P++MSVM+TD  TSE+RMAE+EKK++ML++ VEE+D 
Subjt:  KTPKNQLRSKETQREDSQTPV-IANKMLRRMTESAQFEIATAENLMLGKFISLSQQP-YETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLRMVEEKDQ

Query:  EIASLKNQMESRD
        EIA LKN +ESRD
Subjt:  EIASLKNQMESRD

A0A5A7TZU9 Ribonuclease H4.1e-6346.46Show/hide
Query:  EDIPEIVACHAVNTFEEGDSSSSPSQNAKKESIEEVDACEVQPKEASTHPVKSKAPKEEAL-------SNVPILRYVPLSRRKKGESPFTECSGILKVGD
        ED+ EI++     T  +G   +       K+S  + DA   Q     T   K +AP+ E +       SN P+LRY+PLSRRKKGESPFTECS  L V +
Subjt:  EDIPEIVACHAVNTFEEGDSSSSPSQNAKKESIEEVDACEVQPKEASTHPVKSKAPKEEAL-------SNVPILRYVPLSRRKKGESPFTECSGILKVGD

Query:  VEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPP
         EILKENFT PLT I K E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKKLQK+GY+IP+SRAG+GY   
Subjt:  VEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPP

Query:  MSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR
          VRIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFDRI     R SV QR+  S ++   Q  T   TR S F RL+ S  K           +
Subjt:  MSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR

Query:  SVFDLLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTE
        S F  L  +  + + K     + +S  +  +    S  PSRMKRK FV +NTE
Subjt:  SVFDLLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTE

A0A5D3BIH8 Uncharacterized protein5.0e-0839.82Show/hide
Query:  KTPKNQLRSKETQREDSQTPV-IANKMLRRMTESAQFEIATAENLMLGKFISLSQQP-YETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLRMVEEKDQ
        K P  + RS+E Q  +   P  +A  + +++++  +  I   EN  + +  SLS++   E   P++MSVM+TD  TSE+RM  +EKK++M ++ VEE+D 
Subjt:  KTPKNQLRSKETQREDSQTPV-IANKMLRRMTESAQFEIATAENLMLGKFISLSQQP-YETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLRMVEEKDQ

Query:  EIASLKNQMESRD
        EIA LKN +ESRD
Subjt:  EIASLKNQMESRD

A0A5D3BIH8 Uncharacterized protein4.1e-6346.46Show/hide
Query:  EDIPEIVACHAVNTFEEGDSSSSPSQNAKKESIEEVDACEVQPKEASTHPVKSKAPKEEAL-------SNVPILRYVPLSRRKKGESPFTECSGILKVGD
        ED+ EI++     T  +G   +       K+S  + DA   Q     T   K +AP+ E +       SN P+LRY+PLSRRKKGESPFTECS  L V +
Subjt:  EDIPEIVACHAVNTFEEGDSSSSPSQNAKKESIEEVDACEVQPKEASTHPVKSKAPKEEAL-------SNVPILRYVPLSRRKKGESPFTECSGILKVGD

Query:  VEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPP
         EILKENFT PLT I K E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKKLQK+GY+IP+SRAG+GY   
Subjt:  VEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPP

Query:  MSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR
          VRIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFDRI     R SV QR+  S ++   Q  T   TR S F RL+ S  K           +
Subjt:  MSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSK-----KVDEPLR

Query:  SVFDLLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTE
        S F  L  +  + + K     + +S  +  +    S  PSRMKRK FV +NTE
Subjt:  SVFDLLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTE

A0A5D3BY54 Ty3-gypsy retrotransposon protein2.3e-6939.14Show/hide
Query:  LQQESTIDIFQDQLESVENEDEGWTLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHE
        L++E T +  Q++   +E +DEGWT+VTRRKK+K   +Q+E  ++ NYRR N +QK K+K K +RK KLV E+++DF  ++  VTL DFFP  FL D  +
Subjt:  LQQESTIDIFQDQLESVENEDEGWTLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHE

Query:  DIPEIVACHAVNTFEEGDSSSSP------------------------------SQNAKKESIEEVDACEVQPK---------------------------
        + P +VA  + ++       S+P                               Q  ++  ++   A  + PK                           
Subjt:  DIPEIVACHAVNTFEEGDSSSSP------------------------------SQNAKKESIEEVDACEVQPK---------------------------

Query:  ------------------------------------------------------EASTHPVKSKAPKEEALSNVPILRYVPLSRRKKGESPFTECSGILK
                                                              EAST   KS    +E  SN PILRYVPLSRRKKGESPF E    LK
Subjt:  ------------------------------------------------------EASTHPVKSKAPKEEALSNVPILRYVPLSRRKKGESPFTECSGILK

Query:  VGDVEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGY
        VGD+E+LKE+FTTPLT ITKQEI   K D  +  LP+RRTK GFDP AYK + KAGYDFTTHTEFKSLKI + + +LS TQKKL +EG+AIP SR GLGY
Subjt:  VGDVEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGY

Query:  NPPMSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVS
         PP  +RITRK   KV D++HIT++E+   E+K+  DSQ+ S FDR+     R  V +RL    +E++    TS   RRS F RL+++
Subjt:  NPPMSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVS

A0A5D3C0W6 Ty3-gypsy retrotransposon protein1.4e-7133.19Show/hide
Query:  MLLRMVEEKDQEIASLKNQMESRDFGTLEPIVIWLQQESTIDIFQDQLESVENEDEGWTLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRK
        ++LR+  EK       K +++  +FGT EP+V+   QE   +  Q++   +E +DE WT+VTRRKK+K   +Q+E   +RNYRR N +QK K+K K +RK
Subjt:  MLLRMVEEKDQEIASLKNQMESRDFGTLEPIVIWLQQESTIDIFQDQLESVENEDEGWTLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRK

Query:  PKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTFEEG-------------------------------------------------
         KL+ +E++DF  ++  +TL DFFP  FL D  ++ P +VACHA+N  EE                                                  
Subjt:  PKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTFEEG-------------------------------------------------

Query:  ------------------------------------------------------------------------------------------------DSSS
                                                                                                        ++ S
Subjt:  ------------------------------------------------------------------------------------------------DSSS

Query:  SPSQNA-----------KKESIEEVDACEV----------------------------QPKEASTHPVKSKAPKEEALSNVPILRYVPLSRRKKGESPFT
        +P   A           K +S  EV + EV                            +  EAST   KS    +E  SN  ILRYVPLSRRKKGESPF 
Subjt:  SPSQNA-----------KKESIEEVDACEV----------------------------QPKEASTHPVKSKAPKEEALSNVPILRYVPLSRRKKGESPFT

Query:  ECSGILKVGDVEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPS
        E    LKVGD+E+LKE+FTTPLT ITKQEI   K D T+  LP+RRTK  FDP AYKL+ KAGYDFTTHTEFKSLKI + + +LS TQKKL +EG+AIP 
Subjt:  ECSGILKVGDVEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYAIPS

Query:  SRAGLGYNPPMSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSKKV
        SR GLGY  P  +RITRK   K+ D++HIT++E+ D   +K  DSQ+ S FDRI     R  V +RL  + +E++    TS   RRS F RLS++  K  
Subjt:  SRAGLGYNPPMSVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKTSVPTRRSVFHRLSVSTSKKV

Query:  DEPLRSVFDLL-------------------QATNGQCKGKLKSLETEESD------EMNDNNGFSSTVPSRMKRKPFVLIN
          P   + + L                     +      ++K +  E         E+       S VPSRMKRK FV +N
Subjt:  DEPLRSVFDLL-------------------QATNGQCKGKLKSLETEESD------EMNDNNGFSSTVPSRMKRKPFVLIN

A0A5D3D1E5 Ribonuclease H5.0e-0839.82Show/hide
Query:  KTPKNQLRSKETQREDSQTPV-IANKMLRRMTESAQFEIATAENLMLGKFISLSQQP-YETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLRMVEEKDQ
        K P  + RS++ Q  +   P  +A  +  ++++  +  I   EN  + +  SL ++   E S P++MSVM+TD  TSE+RMAE+EKK++ML++ VEE+D 
Subjt:  KTPKNQLRSKETQREDSQTPV-IANKMLRRMTESAQFEIATAENLMLGKFISLSQQP-YETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLRMVEEKDQ

Query:  EIASLKNQMESRD
         IA  KN +ESRD
Subjt:  EIASLKNQMESRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCGTGGAAGACTCCGAAACGGCGGTGGGAGAGGTCGCCGGTGAATGGCTCGTCGGAAGGTGGGCTTGCTGAGTCAGAGAAGCCAGAGCCCAGAGCATTCTCCCA
AGGTCCAGAGTCTTCAGAAGTCATAGAGTCTAGAGAATTCAGAAGATCCAAGATTCAGAATTCGGCCAACTCAAGACTCAGAAGATCCAACGACTTGAAGACTCCAAAGA
ATCAACTTCGCTCCAAGGAAACCCAACGTGAAGACAGCCAAACTCCTGTCATTGCAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAATTTGAAATCGCCACTGCA
GAAAATCTGATGCTTGGAAAATTCATCTCTCTTTCTCAGCAACCATATGAAACATCAAGTCCTGATGTGATGTCTGTTATGATGACTGATGCAGGAACTAGTGAAGAACG
AATGGCTGAAGTTGAGAAGAAAATCAGCATGTTACTGAGGATGGTCGAAGAGAAAGACCAAGAAATCGCCTCTCTCAAGAACCAGATGGAAAGTCGGGATTTCGGGACAT
TAGAGCCGATTGTTATTTGGCTTCAGCAAGAATCTACAATAGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAGGATGGACTTTGGTAACTCGTCGA
AAGAAACAAAAGAAACATTCCGTTCAAAGAGAGCCTCACATGTTCCGTAACTACAGAAGAAAGAACATGTCACAAAAGCAGAAGAGAAAGATCAAAGGTTCGAGAAAGCC
TAAACTAGTTGTCGAAGAGAATCAAGATTTTGTTCTGTCTCGACATCCGGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTCTTAATGATGATCATGAGGACATCCCTG
AGATAGTCGCATGTCATGCTGTCAATACATTTGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGAATGCGAAGAAGGAGTCGATCGAAGAAGTAGATGCTTGTGAAGTT
CAACCAAAGGAAGCATCCACTCACCCTGTAAAATCGAAAGCTCCAAAGGAAGAGGCATTGTCAAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGACGCAAGAAAGG
GGAATCACCATTCACAGAATGTTCAGGAATTTTGAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCACCACACCTCTGACGACAATTACCAAGCAAGAGATTCAGG
AATCAAAGACTGATCGTACCAAAGTGATTTTGCCGGAAAGACGAACGAAGGCTGGATTTGACCCAAATGCATACAAACTCCTAGAAAAGGCAGGATACGACTTTACAACT
CATACTGAGTTTAAAAGTCTAAAAATCTTCGATGGGAGATCTGAGCTTTCTCCAACACAGAAGAAGCTCCAAAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGACT
AGGATATAATCCCCCAATGTCAGTTCGTATAACCAGAAAATGGAAGGTTGCAGATGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATG
ATAGCCAGAAAATCTCTGTCTTTGATCGCATTAAAGCGCCGACTACTCGTCTTTCAGTTCATCAGCGGCTGAAATATTCATCTTCAGAAAAGGAAGGTCAGGGAAAAACT
TCTGTTCCTACTCGACGTTCAGTGTTTCATCGTCTGAGTGTGTCTACATCGAAGAAAGTAGATGAACCTTTGAGATCCGTGTTTGACCTCCTTCAAGCAACAAATGGCCA
ATGCAAGGGAAAGTTGAAAAGTCTCGAAACAGAAGAATCCGATGAAATGAATGACAACAATGGTTTTTCCAGTACTGTTCCTTCGCGGATGAAGAGAAAGCCTTTCGTTC
TCATAAATACGGAAGTGAATTATGATGAGAAACAAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCGTGGAAGACTCCGAAACGGCGGTGGGAGAGGTCGCCGGTGAATGGCTCGTCGGAAGGTGGGCTTGCTGAGTCAGAGAAGCCAGAGCCCAGAGCATTCTCCCA
AGGTCCAGAGTCTTCAGAAGTCATAGAGTCTAGAGAATTCAGAAGATCCAAGATTCAGAATTCGGCCAACTCAAGACTCAGAAGATCCAACGACTTGAAGACTCCAAAGA
ATCAACTTCGCTCCAAGGAAACCCAACGTGAAGACAGCCAAACTCCTGTCATTGCAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAATTTGAAATCGCCACTGCA
GAAAATCTGATGCTTGGAAAATTCATCTCTCTTTCTCAGCAACCATATGAAACATCAAGTCCTGATGTGATGTCTGTTATGATGACTGATGCAGGAACTAGTGAAGAACG
AATGGCTGAAGTTGAGAAGAAAATCAGCATGTTACTGAGGATGGTCGAAGAGAAAGACCAAGAAATCGCCTCTCTCAAGAACCAGATGGAAAGTCGGGATTTCGGGACAT
TAGAGCCGATTGTTATTTGGCTTCAGCAAGAATCTACAATAGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAGGATGGACTTTGGTAACTCGTCGA
AAGAAACAAAAGAAACATTCCGTTCAAAGAGAGCCTCACATGTTCCGTAACTACAGAAGAAAGAACATGTCACAAAAGCAGAAGAGAAAGATCAAAGGTTCGAGAAAGCC
TAAACTAGTTGTCGAAGAGAATCAAGATTTTGTTCTGTCTCGACATCCGGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTCTTAATGATGATCATGAGGACATCCCTG
AGATAGTCGCATGTCATGCTGTCAATACATTTGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGAATGCGAAGAAGGAGTCGATCGAAGAAGTAGATGCTTGTGAAGTT
CAACCAAAGGAAGCATCCACTCACCCTGTAAAATCGAAAGCTCCAAAGGAAGAGGCATTGTCAAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGACGCAAGAAAGG
GGAATCACCATTCACAGAATGTTCAGGAATTTTGAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCACCACACCTCTGACGACAATTACCAAGCAAGAGATTCAGG
AATCAAAGACTGATCGTACCAAAGTGATTTTGCCGGAAAGACGAACGAAGGCTGGATTTGACCCAAATGCATACAAACTCCTAGAAAAGGCAGGATACGACTTTACAACT
CATACTGAGTTTAAAAGTCTAAAAATCTTCGATGGGAGATCTGAGCTTTCTCCAACACAGAAGAAGCTCCAAAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGACT
AGGATATAATCCCCCAATGTCAGTTCGTATAACCAGAAAATGGAAGGTTGCAGATGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATG
ATAGCCAGAAAATCTCTGTCTTTGATCGCATTAAAGCGCCGACTACTCGTCTTTCAGTTCATCAGCGGCTGAAATATTCATCTTCAGAAAAGGAAGGTCAGGGAAAAACT
TCTGTTCCTACTCGACGTTCAGTGTTTCATCGTCTGAGTGTGTCTACATCGAAGAAAGTAGATGAACCTTTGAGATCCGTGTTTGACCTCCTTCAAGCAACAAATGGCCA
ATGCAAGGGAAAGTTGAAAAGTCTCGAAACAGAAGAATCCGATGAAATGAATGACAACAATGGTTTTTCCAGTACTGTTCCTTCGCGGATGAAGAGAAAGCCTTTCGTTC
TCATAAATACGGAAGTGAATTATGATGAGAAACAAGTCTGA
Protein sequenceShow/hide protein sequence
MDSWKTPKRRWERSPVNGSSEGGLAESEKPEPRAFSQGPESSEVIESREFRRSKIQNSANSRLRRSNDLKTPKNQLRSKETQREDSQTPVIANKMLRRMTESAQFEIATA
ENLMLGKFISLSQQPYETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLRMVEEKDQEIASLKNQMESRDFGTLEPIVIWLQQESTIDIFQDQLESVENEDEGWTLVTRR
KKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTFEEGDSSSSPSQNAKKESIEEVDACEV
QPKEASTHPVKSKAPKEEALSNVPILRYVPLSRRKKGESPFTECSGILKVGDVEILKENFTTPLTTITKQEIQESKTDRTKVILPERRTKAGFDPNAYKLLEKAGYDFTT
HTEFKSLKIFDGRSELSPTQKKLQKEGYAIPSSRAGLGYNPPMSVRITRKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSEKEGQGKT
SVPTRRSVFHRLSVSTSKKVDEPLRSVFDLLQATNGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEVNYDEKQV