; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031136 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031136
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold8:29302859..29308897
RNA-Seq ExpressionSpg031136
SyntenySpg031136
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.7e-3630.63Show/hide
Query:  VVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKRKVKSQRKKGNKKSRMSKHVVEESEDFFCPPQPITLAEYFPRCFLDD
        + +   +E T + SQEK   IE+++EGWT+V RRKK+K +  +KES L+ + +R  K+Q+ K  KK+R  K V E+ +DF    + +TLA++FP  FL D
Subjt:  VVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKRKVKSQRKKGNKKSRMSKHVVEESEDFFCPPQPITLAEYFPRCFLDD

Query:  GQGEALEIIT-----------------CHIVDVVEDD--------DVPASSSGTV------------AGPGDLSSFSIKDLLSLPQEAKSNDKL------
         Q E   ++                  C  +D  ++D        + P   SG V                ++   S    L +  E  SN KL      
Subjt:  GQGEALEIIT-----------------CHIVDVVEDD--------DVPASSSGTV------------AGPGDLSSFSIKDLLSLPQEAKSNDKL------

Query:  ---------------------------------DLEPQADARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPK
                                         +L+ ++ A +E  +        K E STS  K  +V DEK S  P+LRYVPLSRRKKGESPF E P+
Subjt:  ---------------------------------DLEPQADARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPK

Query:  SIK-----------------------------------------------------------------------------KKLLKEGYSLPTTRKGLGDK
         +K                                                                             KKLL+EG+++P +RKGLG K
Subjt:  SIK-----------------------------------------------------------------------------KKLLKEGYSLPTTRKGLGDK

Query:  SPKPIRITRKGKAKVAEINHITVEEVDDSKEEESVDQRASVFRRIRPPIARASVFQRIIVNETEEESAQLTNSSTRSSVF
         P+PIRITRKGK KV + NHITV+EVD  +E+E   QR S F R+ P +ARA VF+R+ + E E +  Q T+S  R S F
Subjt:  SPKPIRITRKGKAKVAEINHITVEEVDDSKEEESVDQRASVFRRIRPPIARASVFQRIIVNETEEESAQLTNSSTRSSVF

KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.6e-1350.53Show/hide
Query:  VASRISKLIEEFSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKR
        VA  I K + E  K  + +K+NPL+++   +S + K   +PDVMSVMMAD+  +  MAEMERK+N LMKAV+ERD EI  L+ Q++ RETAES +
Subjt:  VASRISKLIEEFSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKR

KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.2e-3529.46Show/hide
Query:  RMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKR--LIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLF
        +  E   K+ L ++ V + +  +  + ++  +      +R  L+QFG  +PVV++F +E   + S+EK  SIE+++EGW +V RRKK+K +   K+S L 
Subjt:  RMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKR--LIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLF

Query:  RDSKRKVKSQRKKGNKKSRMSKHVVEESEDFFCPPQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQ
               K+Q+ K  K +R  K V EE++DF  P + +TL ++FP  F  D Q E   ++ CH ++  E++ +P  S        DLS F++ DLLSL  
Subjt:  RDSKRKVKSQRKKGNKKSRMSKHVVEESEDFFCPPQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQ

Query:  EAKSND-------------------------------------------------KLDLEPQADARKEVVE-----------DVKACDLKKGETSTSLVK
          +S+                                                  + D  P + A     +           +V   ++  GE STS  K
Subjt:  EAKSND-------------------------------------------------KLDLEPQADARKEVVE-----------DVKACDLKKGETSTSLVK

Query:  PKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK----------------------------------------------KKLLKEGYSLPT-TRK
          ++ DEK S  P+L Y+PLSR KKGESPF + P+ +K                                              K ++K GY   T T K
Subjt:  PKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK----------------------------------------------KKLLKEGYSLPT-TRK

Query:  GLGDKSPKPIRITRKGKAKVAEINHITVEEVDDSKEEES--VDQRASVFRRIRPPIARASVFQRI
        GLG +SP+PIRI RKGK KV + NHIT+EEVD  +E+E   V   +S+  + + P +R SV+ RI
Subjt:  GLGDKSPKPIRITRKGKAKVAEINHITVEEVDDSKEEES--VDQRASVFRRIRPPIARASVFQRI

TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.4e-4228.42Show/hide
Query:  RETAESKRLIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKRKVKSQRKKGNKKSRMSKHVVEESEDFFCP
        RE      L +FGT +PVV+RF +E   + SQEK   IE+++E WT+V RRKK+K +  +KE   +R+ +R  K+Q+ K  KK+R  K + +E +DF   
Subjt:  RETAESKRLIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKRKVKSQRKKGNKKSRMSKHVVEESEDFFCP

Query:  PQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAK-------------------------------
         + ITLA++FP  FL D Q E   ++ CH ++  E++ +P  S        DLS F++ DLLSLPQE K                               
Subjt:  PQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAK-------------------------------

Query:  ----------------------------------------------------------SNDKLDLEPQADARKEVVEDVKACDL----------------
                                                                  SN KL ++      + V++ VK  +                 
Subjt:  ----------------------------------------------------------SNDKLDLEPQADARKEVVEDVKACDL----------------

Query:  --------------------------------------------KKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------
                                                    +K E STS  K  ++ DEK S   +LRYVPLSRRKKGESPF E P+ +K       
Subjt:  --------------------------------------------KKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------

Query:  ----------------------------------------------------------------------KKLLKEGYSLPTTRKGLGDKSPKPIRITRK
                                                                              KKLL+EG+++P +RKGLG K P+PIRITRK
Subjt:  ----------------------------------------------------------------------KKLLKEGYSLPTTRKGLGDKSPKPIRITRK

Query:  GKAKVAEINHITVEEVDDSKEEESVDQRASVFRRIRPPIARASVFQRIIVNETEEESAQLTNSSTRSSVF
        GK K+ + NHITV+EVD  KE+E   QR S F RI P +ARA VF+R+ V E E +  Q T++  R S F
Subjt:  GKAKVAEINHITVEEVDDSKEEESVDQRASVFRRIRPPIARASVFQRIIVNETEEESAQLTNSSTRSSVF

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]4.4e-3425.11Show/hide
Query:  ERKLNLLMKAVDERD-LEIAYLKNQLQNRETAES-KRLIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKR
        E+++ L ++ V + +  E+  +     +R   E  K L+QFGT +P+V++F +E + +  Q +   IE+++EGW +V  RKK++    ++ES  +++ +R
Subjt:  ERKLNLLMKAVDERD-LEIAYLKNQLQNRETAES-KRLIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKR

Query:  KVKSQRKKGNKKSRMSKHVVEESEDFFCPPQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAK--
          K+Q+ K  KK+   K V  E  +F  P + +TLA++ P+ FL D Q E  E++ CH ++  E++ +P  S        DLS F+++DLLSLPQE K  
Subjt:  KVKSQRKKGNKKSRMSKHVVEESEDFFCPPQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAK--

Query:  ---------------------------------------------------------------------------------------SNDKL--------
                                                                                               SN KL        
Subjt:  ---------------------------------------------------------------------------------------SNDKL--------

Query:  -------------------------------------------------------------------DLEPQADARK-----------------------
                                                                           D  P ++A                         
Subjt:  -------------------------------------------------------------------DLEPQADARK-----------------------

Query:  ----------------EVVEDVKACDLKKGETSTSLVKPKVVEDEKC--SPVLRYVPLSRRKKGESPFTECPKSIK------------------------
                        E  E  +  +  KGE  TS  K  +++DE    +PVLRYVPLSRRKKGESPF E PK +K                        
Subjt:  ----------------EVVEDVKACDLKKGETSTSLVKPKVVEDEKC--SPVLRYVPLSRRKKGESPFTECPKSIK------------------------

Query:  -----------------------------------------------------KKLLKEGYSLPTTRKGLGDKSPKPIRITRKGKAKVAEINHITVEEVD
                                                             KKLL+EG+S+P +RKGLG KSP+PIRIT+KGK KV +INHIT+EE D
Subjt:  -----------------------------------------------------KKLLKEGYSLPTTRKGLGDKSPKPIRITRKGKAKVAEINHITVEEVD

Query:  DSKEEESVDQRASVFRRIRPPIARASVFQRIIVNETEEESAQLTNSSTRSSVF
        ++  +E  +QR SVF RIRP +AR  VF+R+ + E E E  Q   S  R SVF
Subjt:  DSKEEESVDQRASVFRRIRPPIARASVFQRIIVNETEEESAQLTNSSTRSSVF

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]5.0e-1454.17Show/hide
Query:  AVASRISKLIEEFSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKR
        A+A  I K + E  K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+Q RETAES +
Subjt:  AVASRISKLIEEFSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKR

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]9.8e-3424.96Show/hide
Query:  ERKLNLLMKAVDERD-LEIAYLKNQLQNRETAES-KRLIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKR
        E+++ L ++ V + +  E+  +     +R   E  K L+QFGT +P+V++F +E + +  Q +   IE+++EGW +V  RKK++    ++ES  +++ +R
Subjt:  ERKLNLLMKAVDERD-LEIAYLKNQLQNRETAES-KRLIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKR

Query:  KVKSQRKKGNKKSRMSKHVVEESEDFFCPPQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAK--
          K+Q+ K  KK+   K V  E  +F  P + +TLA++ P+ FL D Q E  E++ CH ++  E++ +P  S        DLS F+++DLLSLPQE K  
Subjt:  KVKSQRKKGNKKSRMSKHVVEESEDFFCPPQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAK--

Query:  ---------------------------------------------------------------------------------------SNDKL--------
                                                                                               SN KL        
Subjt:  ---------------------------------------------------------------------------------------SNDKL--------

Query:  -------------------------------------------------------------------DLEPQADARK-----------------------
                                                                           D  P ++A                         
Subjt:  -------------------------------------------------------------------DLEPQADARK-----------------------

Query:  ----------------EVVEDVKACDLKKGETSTSLVKPKVVEDEKC--SPVLRYVPLSRRKKGESPFTECPKSIK------------------------
                        E  E  +  +  KGE  TS  K  +++DE    +PVLRYVPLSRRKKGESPF E PK +K                        
Subjt:  ----------------EVVEDVKACDLKKGETSTSLVKPKVVEDEKC--SPVLRYVPLSRRKKGESPFTECPKSIK------------------------

Query:  -----------------------------------------------------KKLLKEGYSLPTTRKGLGDKSPKPIRITRKGKAKVAEINHITVEEVD
                                                             KKLL+EG+S+P +RKGLG KSP+PIRIT+KGK KV +INHIT+EE D
Subjt:  -----------------------------------------------------KKLLKEGYSLPTTRKGLGDKSPKPIRITRKGKAKVAEINHITVEEVD

Query:  DSKEEESVDQRASVFRRIRPPIARASVFQRIIVNETEEESAQLTNSSTRSSVF
        ++  +E  +QR SVF RIRP +AR  VF+R+ + E E E  Q   +  R SVF
Subjt:  DSKEEESVDQRASVFRRIRPPIARASVFQRIIVNETEEESAQLTNSSTRSSVF

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]5.0e-1454.17Show/hide
Query:  AVASRISKLIEEFSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKR
        A+A  I K + E  K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+Q RETAES +
Subjt:  AVASRISKLIEEFSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKR

TrEMBL top hitse value%identityAlignment
A0A5A7SJC0 Ribonuclease H2.4e-3027.92Show/hide
Query:  YLKNQLQNRETAESK---RLIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKRKVKSQRKKGNKKSRMSKH
        ++  +L  R T E K    L +FGT +P+V++F +E  +K SQEK  SIE+++EGWT+                                          
Subjt:  YLKNQLQNRETAESK---RLIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKRKVKSQRKKGNKKSRMSKH

Query:  VVEESEDFFCPPQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAKS-------------------
                                       E LE++ CH ++  +++ +P  S        DL  F++ D LS PQE K+                   
Subjt:  VVEESEDFFCPPQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAKS-------------------

Query:  -------------------------NDKLDLEPQADARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPK----
                                 N + +L+ ++   KE  +     +  KGE STS  K  ++  EK S  P+LRYVPLSRRKKGESPF E P+    
Subjt:  -------------------------NDKLDLEPQADARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPK----

Query:  -------------------------------------------------------------------------SIKKKLLKEGYSLPTTRKGLGDKSPKP
                                                                                 SI+KKLL+EG+ +P +RKGLG KSP+ 
Subjt:  -------------------------------------------------------------------------SIKKKLLKEGYSLPTTRKGLGDKSPKP

Query:  IRITRKGKAKVAEINHITVEEVDDSKEEESVDQRASVFRRIRPPIARASVFQRIIVNETEEE
        IRITRKGK KV + N+ITVEEVD  +E+E   QR S F RIRP +ARA VF+R+ + ETE +
Subjt:  IRITRKGKAKVAEINHITVEEVDDSKEEESVDQRASVFRRIRPPIARASVFQRIIVNETEEE

A0A5D3BSG5 Uncharacterized protein3.4e-3225.79Show/hide
Query:  ERKLNLLMKAVDERDLEIAYLKNQ-LQNRETAESKR-LIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKR
        E+K+ L ++ V + +   A + ++ L  R   E +  L+QFGT +PVV+RF +E   + SQEK   IE+++EGWT+V RRKK+K +  +KE   +R+ ++
Subjt:  ERKLNLLMKAVDERDLEIAYLKNQ-LQNRETAESKR-LIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKR

Query:  KVKSQRKKGNKKSRMSKHVVEESEDFFCPPQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAK--
          K+Q+ K  KK+R  K + EE +DF    + +TLA++FP  FL D Q E   ++ CH ++ +E++++P  S        DLS F++ DLLSLPQE K  
Subjt:  KVKSQRKKGNKKSRMSKHVVEESEDFFCPPQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAK--

Query:  ---------------------------------------------------------------------------------------SNDKL--------
                                                                                               SN KL        
Subjt:  ---------------------------------------------------------------------------------------SNDKL--------

Query:  ---------------DLEPQA-----DAR-----------------------------KEVVEDVKACDLKKGETSTSLVKPK--VVEDEKCSPVLRYVP
                       DL+  A     D+R                             ++ V+ V+A      E  +     K  +  D     V   VP
Subjt:  ---------------DLEPQA-----DAR-----------------------------KEVVEDVKACDLKKGETSTSLVKPK--VVEDEKCSPVLRYVP

Query:  L------------------------------------SRRKKGESPFTECPKSIK---------------------------------------------
        L                                     +RKKGESPF E P+ +K                                             
Subjt:  L------------------------------------SRRKKGESPFTECPKSIK---------------------------------------------

Query:  --------------------------------KKLLKEGYSLPTTRKGLGDKSPKPIRITRKGKAKVAEINHITVEEVDDSKEEESVDQRASVFRRIRPP
                                        KKLL+EG+ +P +RKGLG KSP+PIRITRKGK KV + NHITV+EVD  +E E   QR S F RI P 
Subjt:  --------------------------------KKLLKEGYSLPTTRKGLGDKSPKPIRITRKGKAKVAEINHITVEEVDDSKEEESVDQRASVFRRIRPP

Query:  IARASVFQRIIVNETEEESAQLTNSSTRSSVF
        +AR  VF+R+ + E E +  Q T++  R SVF
Subjt:  IARASVFQRIIVNETEEESAQLTNSSTRSSVF

A0A5D3BY54 Ty3-gypsy retrotransposon protein2.3e-3630.63Show/hide
Query:  VVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKRKVKSQRKKGNKKSRMSKHVVEESEDFFCPPQPITLAEYFPRCFLDD
        + +   +E T + SQEK   IE+++EGWT+V RRKK+K +  +KES L+ + +R  K+Q+ K  KK+R  K V E+ +DF    + +TLA++FP  FL D
Subjt:  VVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKRKVKSQRKKGNKKSRMSKHVVEESEDFFCPPQPITLAEYFPRCFLDD

Query:  GQGEALEIIT-----------------CHIVDVVEDD--------DVPASSSGTV------------AGPGDLSSFSIKDLLSLPQEAKSNDKL------
         Q E   ++                  C  +D  ++D        + P   SG V                ++   S    L +  E  SN KL      
Subjt:  GQGEALEIIT-----------------CHIVDVVEDD--------DVPASSSGTV------------AGPGDLSSFSIKDLLSLPQEAKSNDKL------

Query:  ---------------------------------DLEPQADARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPK
                                         +L+ ++ A +E  +        K E STS  K  +V DEK S  P+LRYVPLSRRKKGESPF E P+
Subjt:  ---------------------------------DLEPQADARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPK

Query:  SIK-----------------------------------------------------------------------------KKLLKEGYSLPTTRKGLGDK
         +K                                                                             KKLL+EG+++P +RKGLG K
Subjt:  SIK-----------------------------------------------------------------------------KKLLKEGYSLPTTRKGLGDK

Query:  SPKPIRITRKGKAKVAEINHITVEEVDDSKEEESVDQRASVFRRIRPPIARASVFQRIIVNETEEESAQLTNSSTRSSVF
         P+PIRITRKGK KV + NHITV+EVD  +E+E   QR S F R+ P +ARA VF+R+ + E E +  Q T+S  R S F
Subjt:  SPKPIRITRKGKAKVAEINHITVEEVDDSKEEESVDQRASVFRRIRPPIARASVFQRIIVNETEEESAQLTNSSTRSSVF

A0A5D3BY54 Ty3-gypsy retrotransposon protein2.7e-1350.53Show/hide
Query:  VASRISKLIEEFSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKR
        VA  I K + E  K  + +K+NPL+++   +S + K   +PDVMSVMMAD+  +  MAEMERK+N LMKAV+ERD EI  L+ Q++ RETAES +
Subjt:  VASRISKLIEEFSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKR

A0A5D3BY54 Ty3-gypsy retrotransposon protein2.5e-3529.46Show/hide
Query:  RMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKR--LIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLF
        +  E   K+ L ++ V + +  +  + ++  +      +R  L+QFG  +PVV++F +E   + S+EK  SIE+++EGW +V RRKK+K +   K+S L 
Subjt:  RMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKR--LIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLF

Query:  RDSKRKVKSQRKKGNKKSRMSKHVVEESEDFFCPPQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQ
               K+Q+ K  K +R  K V EE++DF  P + +TL ++FP  F  D Q E   ++ CH ++  E++ +P  S        DLS F++ DLLSL  
Subjt:  RDSKRKVKSQRKKGNKKSRMSKHVVEESEDFFCPPQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQ

Query:  EAKSND-------------------------------------------------KLDLEPQADARKEVVE-----------DVKACDLKKGETSTSLVK
          +S+                                                  + D  P + A     +           +V   ++  GE STS  K
Subjt:  EAKSND-------------------------------------------------KLDLEPQADARKEVVE-----------DVKACDLKKGETSTSLVK

Query:  PKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK----------------------------------------------KKLLKEGYSLPT-TRK
          ++ DEK S  P+L Y+PLSR KKGESPF + P+ +K                                              K ++K GY   T T K
Subjt:  PKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK----------------------------------------------KKLLKEGYSLPT-TRK

Query:  GLGDKSPKPIRITRKGKAKVAEINHITVEEVDDSKEEES--VDQRASVFRRIRPPIARASVFQRI
        GLG +SP+PIRI RKGK KV + NHIT+EEVD  +E+E   V   +S+  + + P +R SV+ RI
Subjt:  GLGDKSPKPIRITRKGKAKVAEINHITVEEVDDSKEEES--VDQRASVFRRIRPPIARASVFQRI

A0A5D3C0W6 Ty3-gypsy retrotransposon protein2.1e-4228.42Show/hide
Query:  RETAESKRLIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKRKVKSQRKKGNKKSRMSKHVVEESEDFFCP
        RE      L +FGT +PVV+RF +E   + SQEK   IE+++E WT+V RRKK+K +  +KE   +R+ +R  K+Q+ K  KK+R  K + +E +DF   
Subjt:  RETAESKRLIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKRKVKSQRKKGNKKSRMSKHVVEESEDFFCP

Query:  PQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAK-------------------------------
         + ITLA++FP  FL D Q E   ++ CH ++  E++ +P  S        DLS F++ DLLSLPQE K                               
Subjt:  PQPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAK-------------------------------

Query:  ----------------------------------------------------------SNDKLDLEPQADARKEVVEDVKACDL----------------
                                                                  SN KL ++      + V++ VK  +                 
Subjt:  ----------------------------------------------------------SNDKLDLEPQADARKEVVEDVKACDL----------------

Query:  --------------------------------------------KKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------
                                                    +K E STS  K  ++ DEK S   +LRYVPLSRRKKGESPF E P+ +K       
Subjt:  --------------------------------------------KKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------

Query:  ----------------------------------------------------------------------KKLLKEGYSLPTTRKGLGDKSPKPIRITRK
                                                                              KKLL+EG+++P +RKGLG K P+PIRITRK
Subjt:  ----------------------------------------------------------------------KKLLKEGYSLPTTRKGLGDKSPKPIRITRK

Query:  GKAKVAEINHITVEEVDDSKEEESVDQRASVFRRIRPPIARASVFQRIIVNETEEESAQLTNSSTRSSVF
        GK K+ + NHITV+EVD  KE+E   QR S F RI P +ARA VF+R+ V E E +  Q T++  R S F
Subjt:  GKAKVAEINHITVEEVDDSKEEESVDQRASVFRRIRPPIARASVFQRIIVNETEEESAQLTNSSTRSSVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTCGCCGAAAACCTATTTCAATCCAAGACGCCACAGGACAGCAATGGAATACACCCAAATCTGCAATTTCGAAGATGATAACGAATGGAAATAGGCCAGGGAG
ATGGATCCTAGAGGCGAAACCGGGGCCAAGACCGAAGGGGTCGGGCTTTTGGCCCAACCCCTGCTCGGCCGAGGCCGAGGCCCATGCATGGCTGAGGCCGACCCTTGGCT
CGCTTGCGCGGGCCGAGCTCCTTCGCCTCCGCTCGGTCCATGCTGCCTCTAGCCGCCCCAGTTCCGCTTGCATTGGAGCCGGTGTGGCTAGCACCACACCGGTGTGCAGG
TTTATCGTCTTGCCGGCCACGTCTTCCCTCTCATCTACAAATTTACCGTTGGTGGCACGTGACGGACAAATCAGGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGGAT
CTCAAAGCTGATTGAAGAATTCTCTAAGGATAAAGTTGCAGTCAAAGACAACCCGCTGTTCGAATCTGTTGTTCCAACATCTAAGCAGCCAAAGGATGCACTAAACCCTG
ATGTGATGTCTGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAATCTCTTGATGAAGGCAGTTGATGAAAGAGATCTGGAGATT
GCCTATTTGAAGAACCAGCTGCAAAACCGAGAAACGGCTGAGTCTAAGAGGCTGATTCAATTTGGGACCCTTGATCCCGTAGTGATTCGATTCCGAAAAGAAGCCACAAT
GAAGGGGTCCCAAGAAAAATATAATTCCATTGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCCAAGTTACGCACGGAAAGAGTCCCACT
TATTTCGAGACAGTAAAAGAAAGGTTAAATCTCAAAGGAAGAAGGGAAACAAGAAATCAAGGATGTCAAAGCATGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCA
CAACCCATAACTTTGGCAGAATACTTCCCAAGGTGCTTTCTCGATGATGGTCAAGGAGAAGCACTTGAAATCATCACTTGTCACATTGTGGACGTGGTGGAAGATGATGA
TGTCCCTGCTAGTTCCTCGGGAACGGTGGCAGGTCCAGGAGACTTATCCTCCTTCAGCATAAAGGATTTATTGTCACTTCCTCAGGAAGCTAAAAGTAATGATAAACTCG
ACTTAGAGCCACAAGCAGATGCAAGGAAGGAAGTTGTTGAGGATGTGAAGGCATGTGACCTGAAAAAGGGTGAAACATCTACAAGCCTTGTGAAACCTAAAGTTGTAGAG
GATGAGAAATGTTCACCTGTCCTACGATACGTCCCTTTATCTCGGCGTAAAAAGGGTGAATCACCTTTCACTGAATGTCCGAAAAGCATAAAGAAGAAGCTTTTAAAGGA
AGGCTATAGTCTGCCTACGACGAGAAAAGGACTTGGAGATAAATCGCCCAAACCGATTCGCATAACAAGAAAAGGGAAGGCGAAAGTGGCAGAAATAAATCATATAACAG
TAGAGGAGGTTGATGACTCAAAAGAAGAAGAGAGCGTCGACCAACGAGCTTCTGTTTTTAGGCGCATCAGGCCACCAATTGCTCGTGCTTCTGTCTTTCAGAGGATAATT
GTGAATGAAACAGAAGAAGAAAGTGCACAACTTACCAATAGCTCCACTCGATCTTCAGTTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATTCGCCGAAAACCTATTTCAATCCAAGACGCCACAGGACAGCAATGGAATACACCCAAATCTGCAATTTCGAAGATGATAACGAATGGAAATAGGCCAGGGAG
ATGGATCCTAGAGGCGAAACCGGGGCCAAGACCGAAGGGGTCGGGCTTTTGGCCCAACCCCTGCTCGGCCGAGGCCGAGGCCCATGCATGGCTGAGGCCGACCCTTGGCT
CGCTTGCGCGGGCCGAGCTCCTTCGCCTCCGCTCGGTCCATGCTGCCTCTAGCCGCCCCAGTTCCGCTTGCATTGGAGCCGGTGTGGCTAGCACCACACCGGTGTGCAGG
TTTATCGTCTTGCCGGCCACGTCTTCCCTCTCATCTACAAATTTACCGTTGGTGGCACGTGACGGACAAATCAGGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGGAT
CTCAAAGCTGATTGAAGAATTCTCTAAGGATAAAGTTGCAGTCAAAGACAACCCGCTGTTCGAATCTGTTGTTCCAACATCTAAGCAGCCAAAGGATGCACTAAACCCTG
ATGTGATGTCTGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAATCTCTTGATGAAGGCAGTTGATGAAAGAGATCTGGAGATT
GCCTATTTGAAGAACCAGCTGCAAAACCGAGAAACGGCTGAGTCTAAGAGGCTGATTCAATTTGGGACCCTTGATCCCGTAGTGATTCGATTCCGAAAAGAAGCCACAAT
GAAGGGGTCCCAAGAAAAATATAATTCCATTGAAGATGAGAACGAAGGTTGGACCCTTGTCGTTCGTCGCAAAAAGCAAAAGCCAAGTTACGCACGGAAAGAGTCCCACT
TATTTCGAGACAGTAAAAGAAAGGTTAAATCTCAAAGGAAGAAGGGAAACAAGAAATCAAGGATGTCAAAGCATGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCA
CAACCCATAACTTTGGCAGAATACTTCCCAAGGTGCTTTCTCGATGATGGTCAAGGAGAAGCACTTGAAATCATCACTTGTCACATTGTGGACGTGGTGGAAGATGATGA
TGTCCCTGCTAGTTCCTCGGGAACGGTGGCAGGTCCAGGAGACTTATCCTCCTTCAGCATAAAGGATTTATTGTCACTTCCTCAGGAAGCTAAAAGTAATGATAAACTCG
ACTTAGAGCCACAAGCAGATGCAAGGAAGGAAGTTGTTGAGGATGTGAAGGCATGTGACCTGAAAAAGGGTGAAACATCTACAAGCCTTGTGAAACCTAAAGTTGTAGAG
GATGAGAAATGTTCACCTGTCCTACGATACGTCCCTTTATCTCGGCGTAAAAAGGGTGAATCACCTTTCACTGAATGTCCGAAAAGCATAAAGAAGAAGCTTTTAAAGGA
AGGCTATAGTCTGCCTACGACGAGAAAAGGACTTGGAGATAAATCGCCCAAACCGATTCGCATAACAAGAAAAGGGAAGGCGAAAGTGGCAGAAATAAATCATATAACAG
TAGAGGAGGTTGATGACTCAAAAGAAGAAGAGAGCGTCGACCAACGAGCTTCTGTTTTTAGGCGCATCAGGCCACCAATTGCTCGTGCTTCTGTCTTTCAGAGGATAATT
GTGAATGAAACAGAAGAAGAAAGTGCACAACTTACCAATAGCTCCACTCGATCTTCAGTTTTTTGA
Protein sequenceShow/hide protein sequence
MGIRRKPISIQDATGQQWNTPKSAISKMITNGNRPGRWILEAKPGPRPKGSGFWPNPCSAEAEAHAWLRPTLGSLARAELLRLRSVHAASSRPSSACIGAGVASTTPVCR
FIVLPATSSLSSTNLPLVARDGQIREDHTPLAVASRISKLIEEFSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEI
AYLKNQLQNRETAESKRLIQFGTLDPVVIRFRKEATMKGSQEKYNSIEDENEGWTLVVRRKKQKPSYARKESHLFRDSKRKVKSQRKKGNKKSRMSKHVVEESEDFFCPP
QPITLAEYFPRCFLDDGQGEALEIITCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAKSNDKLDLEPQADARKEVVEDVKACDLKKGETSTSLVKPKVVE
DEKCSPVLRYVPLSRRKKGESPFTECPKSIKKKLLKEGYSLPTTRKGLGDKSPKPIRITRKGKAKVAEINHITVEEVDDSKEEESVDQRASVFRRIRPPIARASVFQRII
VNETEEESAQLTNSSTRSSVF