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Spg031200 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031200
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransducin/WD40 repeat-like superfamily protein
Genome locationscaffold8:28295393..28301320
RNA-Seq ExpressionSpg031200
SyntenySpg031200
Gene Ontology termsNA
InterPro domainsIPR023123 - Tubulin, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G78070.1 Transducin/WD40 repeat-like superfamily protein6.0e-0778.57Show/hide
Query:  CLEVEKGNNFYDIQFNTRLVKSTIVHLE
        CL+VEKG NFYD QFNTRLVKSTI H +
Subjt:  CLEVEKGNNFYDIQFNTRLVKSTIVHLE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCGGGCCATGGGAGCTAAATGGCGTGCATCTATTGAAGAGGAAGCAAGGCTCTGGGAAGCTGAAGAGTTATTCCCTATTGCGAGCAAGACTTCACGACAAGGAGG
ATCTTCAATGGCTCTTGCTATTGCTGAAGGGTATAGAGCCGAGCAAGATGCTTTGAATGAGTTGAGGCCTAAAAGAGAAGAGCGATTAAGGGAAATTCGGTTCATGAAGA
TCGAGGAAGAATTGAGTAAAAAGAGAGATGAAGAGGATGAAAAGAGAAAGAATGAAGGTGAAAAGGACGAAGAAAAAGAAAGGCAAGAGGCCGAGAGGGCCATAAGAGAA
GAAGATGAAAGAATAAAGAAAGAAGAGGTTGCGAGAGAAAGGAAAGAAGATGAAGAGCTGAGGAGATTGGCTGCTAAACTCCAACTCCTTGGAAAAGAAAAAATGAATAT
ACTATGTTTTAGCCTAATTATAAGATTTGATGCTTTGGAGATCTTTTGTAGAGAAATAAATGTGGAGCAGATTGAGAGAGCAAAGTCCGTTGATCTAGCAAAGCTATCTG
TGCGTGGGCAGCTAGAACTCCTCAGATCTATGCGTGGGTGGGTAGTTTCGGCACTGTTTGTGGTCGTGGAGGTGTTGTCCATGGGTGGTCGTGAGTGGAATTGCTTGGAA
GTTGAAAAGGGGAACAATTTTTATGACATCCAGTTCAATACTAGGCTTGTTAAATCAACCATTGTTCATTTGGAAGGTGTAGTGTCAACACAGAACTTTAAAGTACCAAA
AGACAAGAGCTTGGATTATGAACTTCACTGTAGGCTTGGATTATCAGATTTCGTGCCTGAAGTGAAAGTTGAAACTTTGGCTGTAATTCATGGAGACCTCATTCATCAAA
GAGGAGGAATGGATGAGATGGAGTTCGCAGAGGCTGAGAGTAATATGAATGATTTGCTATCAAAGTACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCGGGCCATGGGAGCTAAATGGCGTGCATCTATTGAAGAGGAAGCAAGGCTCTGGGAAGCTGAAGAGTTATTCCCTATTGCGAGCAAGACTTCACGACAAGGAGG
ATCTTCAATGGCTCTTGCTATTGCTGAAGGGTATAGAGCCGAGCAAGATGCTTTGAATGAGTTGAGGCCTAAAAGAGAAGAGCGATTAAGGGAAATTCGGTTCATGAAGA
TCGAGGAAGAATTGAGTAAAAAGAGAGATGAAGAGGATGAAAAGAGAAAGAATGAAGGTGAAAAGGACGAAGAAAAAGAAAGGCAAGAGGCCGAGAGGGCCATAAGAGAA
GAAGATGAAAGAATAAAGAAAGAAGAGGTTGCGAGAGAAAGGAAAGAAGATGAAGAGCTGAGGAGATTGGCTGCTAAACTCCAACTCCTTGGAAAAGAAAAAATGAATAT
ACTATGTTTTAGCCTAATTATAAGATTTGATGCTTTGGAGATCTTTTGTAGAGAAATAAATGTGGAGCAGATTGAGAGAGCAAAGTCCGTTGATCTAGCAAAGCTATCTG
TGCGTGGGCAGCTAGAACTCCTCAGATCTATGCGTGGGTGGGTAGTTTCGGCACTGTTTGTGGTCGTGGAGGTGTTGTCCATGGGTGGTCGTGAGTGGAATTGCTTGGAA
GTTGAAAAGGGGAACAATTTTTATGACATCCAGTTCAATACTAGGCTTGTTAAATCAACCATTGTTCATTTGGAAGGTGTAGTGTCAACACAGAACTTTAAAGTACCAAA
AGACAAGAGCTTGGATTATGAACTTCACTGTAGGCTTGGATTATCAGATTTCGTGCCTGAAGTGAAAGTTGAAACTTTGGCTGTAATTCATGGAGACCTCATTCATCAAA
GAGGAGGAATGGATGAGATGGAGTTCGCAGAGGCTGAGAGTAATATGAATGATTTGCTATCAAAGTACCATTAG
Protein sequenceShow/hide protein sequence
MIRAMGAKWRASIEEEARLWEAEELFPIASKTSRQGGSSMALAIAEGYRAEQDALNELRPKREERLREIRFMKIEEELSKKRDEEDEKRKNEGEKDEEKERQEAERAIRE
EDERIKKEEVARERKEDEELRRLAAKLQLLGKEKMNILCFSLIIRFDALEIFCREINVEQIERAKSVDLAKLSVRGQLELLRSMRGWVVSALFVVVEVLSMGGREWNCLE
VEKGNNFYDIQFNTRLVKSTIVHLEGVVSTQNFKVPKDKSLDYELHCRLGLSDFVPEVKVETLAVIHGDLIHQRGGMDEMEFAEAESNMNDLLSKYH