; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031201 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031201
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationscaffold8:29204795..29206527
RNA-Seq ExpressionSpg031201
SyntenySpg031201
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR038944 - Outer envelope membrane protein 7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049387.1 hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa]3.1e-1377.05Show/hide
Query:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKLD
        M+ TAKLNAARS LVVIGALAFGYLSLQ+ FKPYLEKAQS LQH + EPST  KDA+S  D
Subjt:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKLD

KAG6428064.1 hypothetical protein SASPL_112313 [Salvia splendens]1.8e-0865.52Show/hide
Query:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAIS
        MRGTAK NA RS LVVIGALAFGYL+L L FKPYLEKAQ   QH  +  S+ P D  +
Subjt:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAIS

KAG6582279.1 hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sororia]4.3e-1573.53Show/hide
Query:  RKIQATMRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKLDD
        R+ +  M+  AKLNA RS +VVIGALAFGYLSL LVFKPYLEKAQ SLQH +SEPST PKDAIS  DD
Subjt:  RKIQATMRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKLDD

KAG7018683.1 hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-1968.18Show/hide
Query:  EEEEEERKKEERKSDYT---RKIQATMRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKLDD
        +++  +RKKE++KSDY    R+ +  M+  AKLNA RS +VVIGALAFGYLSL LVFKPYLEKAQSSLQH DSEPST PKDAIS  DD
Subjt:  EEEEEERKKEERKSDYT---RKIQATMRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKLDD

KGN57013.1 hypothetical protein Csa_010432 [Cucumis sativus]3.6e-1786.89Show/hide
Query:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKLD
        M+ TAKLNAARS LVVIGALAFGYLSLQLVFKPYLEKAQSSLQH + EPST PKDAIS LD
Subjt:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKLD

TrEMBL top hitse value%identityAlignment
A0A0A0L5N1 Uncharacterized protein1.7e-1786.89Show/hide
Query:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKLD
        M+ TAKLNAARS LVVIGALAFGYLSLQLVFKPYLEKAQSSLQH + EPST PKDAIS LD
Subjt:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKLD

A0A4D9A3A6 Uncharacterized protein8.6e-0965.52Show/hide
Query:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAIS
        MRGTAK NA RS LVVIGALAFGYL+L L FKPYLEKAQ   QH  +  S+ P D  +
Subjt:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAIS

A0A4D9BKZ9 Uncharacterized protein2.1e-0762.07Show/hide
Query:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAIS
        MRGTAK NA RS +VVIGALAFGYL+L L FKPYLEKAQ   Q   +  S+ P D  +
Subjt:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAIS

A0A5A7U4W2 Uncharacterized protein1.5e-1377.05Show/hide
Query:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKLD
        M+ TAKLNAARS LVVIGALAFGYLSLQ+ FKPYLEKAQS LQH + EPST  KDA+S  D
Subjt:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKLD

W9R337 Uncharacterized protein6.1e-0759.62Show/hide
Query:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTA
        MR   K+NA RS +VV+GA+AFGYL+L L FKP+LEKAQ S++H  S+PS++
Subjt:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G19151.1 unknown protein2.3e-0649.09Show/hide
Query:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKD
        M+ T   NA RS +VV+G+LAFGYLSL+L +KP+LEKA+   + L S      +D
Subjt:  MRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAAAATCTCACTACCACCATCATATTTCAGCAATACAGGAAGCGCTATAGATCAAAGGGAAATTTGGAAAGCTCCGAATAAGAATACTTACAAGGTCAATATCGA
TGCTTATGTCAAAGATGGTGTGTTCGGTAGAGGAATAATTATCCGAAGCAAATTTGGTGAGGTTATGACAGCAGCTCAGTTCGTTGATCCATTTCTGGAAGTTATAGAAA
CGGCTGAAGCTATAGCCTTCCTAGAAGGGTTAGAGCTTGCAAAATTAATACGCATTCGCCTAATCTGGGTGGAAATGGATTCCATTATAATGGAAGGGCTTTTACTAACC
TGTAGATCGTCAAACCAAGCAGCCAATGCCCTAGCAGCCCACGCTCGAAGCAATCGCGCTGATGGAGTTTGGATGGAAGAAATTCGTCCTTCGTCGATTCCTGCTAGCAA
TAGCAACGCGTACCTTTTCGTATTTCGCCTTTCAATGGAAGAAGAAGAAGAAGAGAGAAAGAAAGAAGAAAGAAAGAGCGATTACACGAGGAAGATACAAGCAACGATGA
GGGGAACAGCGAAGTTGAATGCGGCGAGGTCCGACTTGGTGGTGATCGGAGCTCTGGCCTTCGGATACCTGAGCCTACAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCT
CAAAGCTCTCTTCAACATCTCGATTCTGAGCCCTCTACAGCTCCCAAAGACGCAATTTCAAAGCTTGATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAAAATCTCACTACCACCATCATATTTCAGCAATACAGGAAGCGCTATAGATCAAAGGGAAATTTGGAAAGCTCCGAATAAGAATACTTACAAGGTCAATATCGA
TGCTTATGTCAAAGATGGTGTGTTCGGTAGAGGAATAATTATCCGAAGCAAATTTGGTGAGGTTATGACAGCAGCTCAGTTCGTTGATCCATTTCTGGAAGTTATAGAAA
CGGCTGAAGCTATAGCCTTCCTAGAAGGGTTAGAGCTTGCAAAATTAATACGCATTCGCCTAATCTGGGTGGAAATGGATTCCATTATAATGGAAGGGCTTTTACTAACC
TGTAGATCGTCAAACCAAGCAGCCAATGCCCTAGCAGCCCACGCTCGAAGCAATCGCGCTGATGGAGTTTGGATGGAAGAAATTCGTCCTTCGTCGATTCCTGCTAGCAA
TAGCAACGCGTACCTTTTCGTATTTCGCCTTTCAATGGAAGAAGAAGAAGAAGAGAGAAAGAAAGAAGAAAGAAAGAGCGATTACACGAGGAAGATACAAGCAACGATGA
GGGGAACAGCGAAGTTGAATGCGGCGAGGTCCGACTTGGTGGTGATCGGAGCTCTGGCCTTCGGATACCTGAGCCTACAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCT
CAAAGCTCTCTTCAACATCTCGATTCTGAGCCCTCTACAGCTCCCAAAGACGCAATTTCAAAGCTTGATGATTAA
Protein sequenceShow/hide protein sequence
MSKISLPPSYFSNTGSAIDQREIWKAPNKNTYKVNIDAYVKDGVFGRGIIIRSKFGEVMTAAQFVDPFLEVIETAEAIAFLEGLELAKLIRIRLIWVEMDSIIMEGLLLT
CRSSNQAANALAAHARSNRADGVWMEEIRPSSIPASNSNAYLFVFRLSMEEEEEERKKEERKSDYTRKIQATMRGTAKLNAARSDLVVIGALAFGYLSLQLVFKPYLEKA
QSSLQHLDSEPSTAPKDAISKLDD