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Spg031204 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031204
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold8:28421593..28424666
RNA-Seq ExpressionSpg031204
SyntenySpg031204
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037514.1 reverse transcriptase [Cucumis melo var. makuwa]7.4e-1256.47Show/hide
Query:  QVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKT-----------------LEIELPVPDTLPTSAESSRTSSSSMFQ
        QVE EA  G VGKLIQ+PTTFMKI PRGNR  LQTR+L KT                 +EIELPVPDTLPTS ES  ++SS+  +
Subjt:  QVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKT-----------------LEIELPVPDTLPTSAESSRTSSSSMFQ

KAA0045180.1 uncharacterized protein E6C27_scaffold30G001810 [Cucumis melo var. makuwa]1.1e-1238.99Show/hide
Query:  QVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKT---------------------------------LEIELPVPDTLPTSAE----------
        QVE EALF MVGKLIQ+PTT MKI PRGNR  LQT +L KT                                 +EIELPVPDTLPTSA+          
Subjt:  QVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKT---------------------------------LEIELPVPDTLPTSAE----------

Query:  -------------------SSRTSSSSMFQEGQRVSLEEDDVRWLHAIFRAKLAGGPGG
                           S   ++S +  EG    +  DDV  +HA+F+AK AG PGG
Subjt:  -------------------SSRTSSSSMFQEGQRVSLEEDDVRWLHAIFRAKLAGGPGG

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]3.8e-1640Show/hide
Query:  IGKAHAKPAIAESGFNLSTSGFLFGLSYTEGTKRAQDFRAKQEDLWFSLVFRALWGVQVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKTLE
        I K +AKPAIAESG N      LFGLSY E   R +  R   +   F LVF                        +  + I PRGNR  L T KL KT+E
Subjt:  IGKAHAKPAIAESGFNLSTSGFLFGLSYTEGTKRAQDFRAKQEDLWFSLVFRALWGVQVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKTLE

Query:  IELPVPDTLPTSAESSRTSSSSMFQ--------------------------EGQRVSLEEDDVRWLHAIFRAKLAGGPGG
        IELPVPDTLPTSAESS+++SS+  +                          EG    +  DD+ WLHA+F AK AG PGG
Subjt:  IELPVPDTLPTSAESSRTSSSSMFQ--------------------------EGQRVSLEEDDVRWLHAIFRAKLAGGPGG

TYJ96574.1 uncharacterized protein E5676_scaffold791G00040 [Cucumis melo var. makuwa]5.9e-1735.62Show/hide
Query:  KAHAKPAIAESGFNLSTSGFLFGLSYTEGTKRAQDFRAKQEDLWFSLVFRALWGVQVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKTLEIE
        K HAKP IAESG N      LF LSY EGTKR   F   +       VF      QVE EA+FG+V KLIQ+PTTFMKI P GNR  LQ  +L KTL I+
Subjt:  KAHAKPAIAESGFNLSTSGFLFGLSYTEGTKRAQDFRAKQEDLWFSLVFRALWGVQVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKTLEIE

Query:  ------------------------------------------------LPVPDTLPTSAESSRTS-------------------SSSMFQEGQRVSLEED
                                                        L V D  P    S  +S                   +S +  +G    +  D
Subjt:  ------------------------------------------------LPVPDTLPTSAESSRTS-------------------SSSMFQEGQRVSLEED

Query:  DVRWLHAIFRAKLAGGPGG
        DV WLHA+FRAK  GGPGG
Subjt:  DVRWLHAIFRAKLAGGPGG

TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]1.1e-1573.53Show/hide
Query:  QVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKTLEIELPVPDTLPTSAESSRTSSSSMFQ
        QVE EALFGMV KLIQ+PTTFM I PRGNR   QT KL KT+EIELPVPDTLPTSAESS ++SS+  +
Subjt:  QVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKTLEIELPVPDTLPTSAESSRTSSSSMFQ

TrEMBL top hitse value%identityAlignment
A0A5A7TPS6 Retrotrans_gag domain-containing protein5.5e-1338.99Show/hide
Query:  QVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKT---------------------------------LEIELPVPDTLPTSAE----------
        QVE EALF MVGKLIQ+PTT MKI PRGNR  LQT +L KT                                 +EIELPVPDTLPTSA+          
Subjt:  QVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKT---------------------------------LEIELPVPDTLPTSAE----------

Query:  -------------------SSRTSSSSMFQEGQRVSLEEDDVRWLHAIFRAKLAGGPGG
                           S   ++S +  EG    +  DDV  +HA+F+AK AG PGG
Subjt:  -------------------SSRTSSSSMFQEGQRVSLEEDDVRWLHAIFRAKLAGGPGG

A0A5A7UAH6 CCHC-type domain-containing protein1.8e-1640Show/hide
Query:  IGKAHAKPAIAESGFNLSTSGFLFGLSYTEGTKRAQDFRAKQEDLWFSLVFRALWGVQVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKTLE
        I K +AKPAIAESG N      LFGLSY E   R +  R   +   F LVF                        +  + I PRGNR  L T KL KT+E
Subjt:  IGKAHAKPAIAESGFNLSTSGFLFGLSYTEGTKRAQDFRAKQEDLWFSLVFRALWGVQVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKTLE

Query:  IELPVPDTLPTSAESSRTSSSSMFQ--------------------------EGQRVSLEEDDVRWLHAIFRAKLAGGPGG
        IELPVPDTLPTSAESS+++SS+  +                          EG    +  DD+ WLHA+F AK AG PGG
Subjt:  IELPVPDTLPTSAESSRTSSSSMFQ--------------------------EGQRVSLEEDDVRWLHAIFRAKLAGGPGG

A0A5D3BC77 CCHC-type domain-containing protein2.8e-1735.62Show/hide
Query:  KAHAKPAIAESGFNLSTSGFLFGLSYTEGTKRAQDFRAKQEDLWFSLVFRALWGVQVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKTLEIE
        K HAKP IAESG N      LF LSY EGTKR   F   +       VF      QVE EA+FG+V KLIQ+PTTFMKI P GNR  LQ  +L KTL I+
Subjt:  KAHAKPAIAESGFNLSTSGFLFGLSYTEGTKRAQDFRAKQEDLWFSLVFRALWGVQVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKTLEIE

Query:  ------------------------------------------------LPVPDTLPTSAESSRTS-------------------SSSMFQEGQRVSLEED
                                                        L V D  P    S  +S                   +S +  +G    +  D
Subjt:  ------------------------------------------------LPVPDTLPTSAESSRTS-------------------SSSMFQEGQRVSLEED

Query:  DVRWLHAIFRAKLAGGPGG
        DV WLHA+FRAK  GGPGG
Subjt:  DVRWLHAIFRAKLAGGPGG

A0A5D3BET3 Uncharacterized protein5.3e-1673.53Show/hide
Query:  QVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKTLEIELPVPDTLPTSAESSRTSSSSMFQ
        QVE EALFGMV KLIQ+PTTFM I PRGNR   QT KL KT+EIELPVPDTLPTSAESS ++SS+  +
Subjt:  QVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKTLEIELPVPDTLPTSAESSRTSSSSMFQ

A0A5D3BV68 Reverse transcriptase3.6e-1256.47Show/hide
Query:  QVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKT-----------------LEIELPVPDTLPTSAESSRTSSSSMFQ
        QVE EA  G VGKLIQ+PTTFMKI PRGNR  LQTR+L KT                 +EIELPVPDTLPTS ES  ++SS+  +
Subjt:  QVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKT-----------------LEIELPVPDTLPTSAESSRTSSSSMFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACCCCTGTGGACTGGATGTTGCGGCGATGTGTTAGGGGAAGCTCATCCTCAGAATCAGTAGATTCTACGTCCAGAGCTGCCGCAATGATGGCTAAGTTGGTTGC
GGCAACTTCTGCGGCTATTGGATCTTGCGCCTGCTTGCTGGTGCATTCTCTTTCTCTGGCCGCTTCTTCATCTACGGCGGCCTTGTGCGCAGTTTCTTCTGTGGCAGCCT
TCTCTTGCTCTTCTCACAGGCGAATTGCGTCGCCTTCCTCGCCTAATTCTCTCATCAGGGAGTTCCATGCGGCCACTTTGGAGAGAGTGAAGGAGGAAGAAGAAGAAGAT
TTTCGTGGTTTGGTGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTTCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACAC
AGAAGGAACTAAGAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGGTGTTTCGAGCATTATGGGGTGTACAAGTTGAATTAGAAGCTCTATTTG
GTATGGTTGGAAAGCTTATTCAATTTCCTACAACTTTCATGAAGATTTCGCCAAGAGGAAATAGGTCGGGTCTACAAACCAGGAAACTAGCTAAGACTTTAGAGATCGAG
CTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGGACAAGCTCCAGTTCAATGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTG
GCTTCACGCCATCTTCCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGTGTTTGCGGGAGAAGAGGAGGAAGATGAAGGGTTGGTGGTTGATGCGAGGGAAGCTGAAGAAT
CTGGGGGCGGAAGAATGGAAACGGTCGGGAAAGGAGAGGAAAATGGGGTTAGGTTTCAAGGGGCTGAAATGTTTTGGGCTGGTTGGAGAGTGACGGGTTGGATGGTGAAG
GTAGAGGTGTCTAAAGGTGCAATGTCGAGCACCTCTGTAGGGTTGGCCGTGGAGATGGAAGGTTCGACCATGGGTTGCTCAACGTCAATAAGCTCGTGTTCCTCGGTTTC
CATGGGGTCTCCTTCGGGTTGGTTTTCATTTTCCTCGCTAGATGAGGAAATGGCGTCTTTGAGAGGTCCTTCCACCTCTGGCGATGAGGGGGAGGCATCGTCTGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTACCCCTGTGGACTGGATGTTGCGGCGATGTGTTAGGGGAAGCTCATCCTCAGAATCAGTAGATTCTACGTCCAGAGCTGCCGCAATGATGGCTAAGTTGGTTGC
GGCAACTTCTGCGGCTATTGGATCTTGCGCCTGCTTGCTGGTGCATTCTCTTTCTCTGGCCGCTTCTTCATCTACGGCGGCCTTGTGCGCAGTTTCTTCTGTGGCAGCCT
TCTCTTGCTCTTCTCACAGGCGAATTGCGTCGCCTTCCTCGCCTAATTCTCTCATCAGGGAGTTCCATGCGGCCACTTTGGAGAGAGTGAAGGAGGAAGAAGAAGAAGAT
TTTCGTGGTTTGGTGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTTCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACAC
AGAAGGAACTAAGAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGGTGTTTCGAGCATTATGGGGTGTACAAGTTGAATTAGAAGCTCTATTTG
GTATGGTTGGAAAGCTTATTCAATTTCCTACAACTTTCATGAAGATTTCGCCAAGAGGAAATAGGTCGGGTCTACAAACCAGGAAACTAGCTAAGACTTTAGAGATCGAG
CTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGGACAAGCTCCAGTTCAATGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTG
GCTTCACGCCATCTTCCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGTGTTTGCGGGAGAAGAGGAGGAAGATGAAGGGTTGGTGGTTGATGCGAGGGAAGCTGAAGAAT
CTGGGGGCGGAAGAATGGAAACGGTCGGGAAAGGAGAGGAAAATGGGGTTAGGTTTCAAGGGGCTGAAATGTTTTGGGCTGGTTGGAGAGTGACGGGTTGGATGGTGAAG
GTAGAGGTGTCTAAAGGTGCAATGTCGAGCACCTCTGTAGGGTTGGCCGTGGAGATGGAAGGTTCGACCATGGGTTGCTCAACGTCAATAAGCTCGTGTTCCTCGGTTTC
CATGGGGTCTCCTTCGGGTTGGTTTTCATTTTCCTCGCTAGATGAGGAAATGGCGTCTTTGAGAGGTCCTTCCACCTCTGGCGATGAGGGGGAGGCATCGTCTGCGTAG
Protein sequenceShow/hide protein sequence
MTTPVDWMLRRCVRGSSSSESVDSTSRAAAMMAKLVAATSAAIGSCACLLVHSLSLAASSSTAALCAVSSVAAFSCSSHRRIASPSSPNSLIREFHAATLERVKEEEEED
FRGLVLKKIGKAHAKPAIAESGFNLSTSGFLFGLSYTEGTKRAQDFRAKQEDLWFSLVFRALWGVQVELEALFGMVGKLIQFPTTFMKISPRGNRSGLQTRKLAKTLEIE
LPVPDTLPTSAESSRTSSSSMFQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGVFAGEEEEDEGLVVDAREAEESGGGRMETVGKGEENGVRFQGAEMFWAGWRVTGWMVK
VEVSKGAMSSTSVGLAVEMEGSTMGCSTSISSCSSVSMGSPSGWFSFSSLDEEMASLRGPSTSGDEGEASSA