; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031213 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031213
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold8:28194435..28200266
RNA-Seq ExpressionSpg031213
SyntenySpg031213
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A5A7U202 Reverse transcriptase5.8e-0462.79Show/hide
Query:  ICMGESGQFADSISLPFQGQDRMGAGNITVQDGIHSFPYWEIF
        IC GESGQ ADSI L F GQDR+G      QDGIHSFP   +F
Subjt:  ICMGESGQFADSISLPFQGQDRMGAGNITVQDGIHSFPYWEIF
A0A5D3CBX3 Reverse transcriptase7.5e-0468.42Show/hide
Query:  ICMGESGQFADSISLPFQGQDRMGAGNITVQDGIHSFP
        IC GESGQ ADSI L F GQDR+G      QDGIHSFP
Subjt:  ICMGESGQFADSISLPFQGQDRMGAGNITVQDGIHSFP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCGTGGATCGCCGTCGAGAGTCACCGATGTCGTGGATCGATGCTGAAGCAAGTCGTTCGCAGGTCAGACGTTGTGTTCAAATGTTGTCGCGGGTCAGACGCTGT
TGGCATTGGTGTTGAAGGAGATGATTGCACTTGTGGTTGGCCGGAATCGCGCCGACTTGCTGCAGAACACGGGTTGTGGGCGATATCGCTTGGGAAGAAGGTCGTCGATA
TCGACCAAGCAGGTCCAACCACTAAACAGGAGTTCCTCTCGGGCCAGGGGAGGACGCCCCCATTCGGTCTTGCCCCTGAAATGGATACCCCCAACCGCATGTCTCCTACA
TGGATGCTTTCGATCATTGCATCTGTATCGAATACAAGGTGGGTCGTATCACATAGTATCACCAGGATAAGGTTGCACCGTGAGATTCCCATGCGCTGCCTGCGAGTCGC
CCTGGGAGTGATCACCCTACGGAGGGCTTGCACATGGGATTCGGAACAACGCAAACTCCAGAAATGGATAGGGTTTCCTAGGGCCATTCCCAACATTAGCTCTTCCCTAC
GGTGGCATTGTTGGGGCCGTCCTCTGCAATCTGAAAATGATGGGGATAAGGCTGGGTACCTTATCCTAGTGACACTATGTGATACGGCCCACCTTGTATTCGATACAGAT
GCAATGATCCAAAGCATCCATATTTGTATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGT
ACAAGATGGAATTCACTCCTTCCCCTATTGGGAAATATTCTATAGTGAGAAGAGTGCAGCTGACCCCTGGGGTGGGGTGAAAGGTATCCCATTCATTCTCCTACTCTCAG
AGAATTCTCCCAAAGGCTCCCACAAGTCACCTGCCTCTAGAAGTCTCAGAGTCATACCGGTAAATTCGCAACAGGACGATTCAAGGCTGTTGGGCGGTCCGATTCACGCG
GTCTGGCTGGGCTGGGACCAATTTGTTCCGGTTCAGCTGGAATTTAGCTCGGTTCGTGATTTTCGTAGTTGGTTCGAAGTGGTTCGGGTTGGTTCGGGCGGTCTAGACCA
GTATTTGGAGGTGCAGAAGGACTTTAAGGATAGAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGTCGTGGATCGCCGTCGAGAGTCACCGATGTCGTGGATCGATGCTGAAGCAAGTCGTTCGCAGGTCAGACGTTGTGTTCAAATGTTGTCGCGGGTCAGACGCTGT
TGGCATTGGTGTTGAAGGAGATGATTGCACTTGTGGTTGGCCGGAATCGCGCCGACTTGCTGCAGAACACGGGTTGTGGGCGATATCGCTTGGGAAGAAGGTCGTCGATA
TCGACCAAGCAGGTCCAACCACTAAACAGGAGTTCCTCTCGGGCCAGGGGAGGACGCCCCCATTCGGTCTTGCCCCTGAAATGGATACCCCCAACCGCATGTCTCCTACA
TGGATGCTTTCGATCATTGCATCTGTATCGAATACAAGGTGGGTCGTATCACATAGTATCACCAGGATAAGGTTGCACCGTGAGATTCCCATGCGCTGCCTGCGAGTCGC
CCTGGGAGTGATCACCCTACGGAGGGCTTGCACATGGGATTCGGAACAACGCAAACTCCAGAAATGGATAGGGTTTCCTAGGGCCATTCCCAACATTAGCTCTTCCCTAC
GGTGGCATTGTTGGGGCCGTCCTCTGCAATCTGAAAATGATGGGGATAAGGCTGGGTACCTTATCCTAGTGACACTATGTGATACGGCCCACCTTGTATTCGATACAGAT
GCAATGATCCAAAGCATCCATATTTGTATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGT
ACAAGATGGAATTCACTCCTTCCCCTATTGGGAAATATTCTATAGTGAGAAGAGTGCAGCTGACCCCTGGGGTGGGGTGAAAGGTATCCCATTCATTCTCCTACTCTCAG
AGAATTCTCCCAAAGGCTCCCACAAGTCACCTGCCTCTAGAAGTCTCAGAGTCATACCGGTAAATTCGCAACAGGACGATTCAAGGCTGTTGGGCGGTCCGATTCACGCG
GTCTGGCTGGGCTGGGACCAATTTGTTCCGGTTCAGCTGGAATTTAGCTCGGTTCGTGATTTTCGTAGTTGGTTCGAAGTGGTTCGGGTTGGTTCGGGCGGTCTAGACCA
GTATTTGGAGGTGCAGAAGGACTTTAAGGATAGAATATAG
Protein sequenceShow/hide protein sequence
MMSWIAVESHRCRGSMLKQVVRRSDVVFKCCRGSDAVGIGVEGDDCTCGWPESRRLAAEHGLWAISLGKKVVDIDQAGPTTKQEFLSGQGRTPPFGLAPEMDTPNRMSPT
WMLSIIASVSNTRWVVSHSITRIRLHREIPMRCLRVALGVITLRRACTWDSEQRKLQKWIGFPRAIPNISSSLRWHCWGRPLQSENDGDKAGYLILVTLCDTAHLVFDTD
AMIQSIHICMGESGQFADSISLPFQGQDRMGAGNITVQDGIHSFPYWEIFYSEKSAADPWGGVKGIPFILLLSENSPKGSHKSPASRSLRVIPVNSQQDDSRLLGGPIHA
VWLGWDQFVPVQLEFSSVRDFRSWFEVVRVGSGGLDQYLEVQKDFKDRI