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Spg031263 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031263
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description50S ribosomal protein L33-like
Genome locationscaffold11:38558743..38559417
RNA-Seq ExpressionSpg031263
SyntenySpg031263
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0009536 - plastid (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR001705 - Ribosomal protein L33
IPR011332 - Zinc-binding ribosomal protein
IPR038584 - Ribosomal protein L33 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575038.1 hypothetical protein SDJN03_25677, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2393.44Show/hide
Query:  KNYQMGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
        +  +MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Subjt:  KNYQMGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

KAG7013613.1 rpmG, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-2398.28Show/hide
Query:  QMGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
        +MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Subjt:  QMGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

XP_004135554.1 uncharacterized protein LOC101212288 [Cucumis sativus]5.1e-23100Show/hide
Query:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
        MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Subjt:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

XP_007223555.1 uncharacterized protein LOC18791548 [Prunus persica]5.6e-2294.74Show/hide
Query:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
        MGDKKKKAT+FIRLVSAAGTGFFYVKRKPTK+TEKLEFRK+DPRVNRHVLFTEAKMK
Subjt:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

XP_022137876.1 uncharacterized protein LOC111009198 [Momordica charantia]8.6e-2398.25Show/hide
Query:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
        MGDKKKKATMFIRLVSAAGTGFFYVKRKPTK+TEKLEFRKYDPRVNRHVLFTEAKMK
Subjt:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

TrEMBL top hitse value%identityAlignment
A0A0A0LVW9 Uncharacterized protein2.5e-23100Show/hide
Query:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
        MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Subjt:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

A0A1S3BBV4 50S ribosomal protein L33-like2.5e-23100Show/hide
Query:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
        MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Subjt:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

A0A6J1CA39 uncharacterized protein LOC1110095992.5e-23100Show/hide
Query:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
        MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Subjt:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

A0A6J1H6A1 uncharacterized protein LOC1114599912.5e-23100Show/hide
Query:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
        MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Subjt:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

A0A6J1KVU2 uncharacterized protein LOC1114991572.5e-23100Show/hide
Query:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
        MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
Subjt:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

SwissProt top hitse value%identityAlignment
A8GY80 50S ribosomal protein L336.0e-1162.96Show/hide
Query:  KKKATMFIRLVSAAGTGFFYV-KRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
        KK   + +RLVS AGTGFF V KR P   TEKL FRKYDP+V +HVLF E K+K
Subjt:  KKKATMFIRLVSAAGTGFFYV-KRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

B3CRY6 50S ribosomal protein L336.0e-1161.11Show/hide
Query:  KKKATMFIRLVSAAGTGFFYVK-RKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
        +KK  + ++LVS+AGTG F+VK R P   TEKL FRKYDP+V +HV FTEAK+K
Subjt:  KKKATMFIRLVSAAGTGFFYVK-RKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

B6IN38 50S ribosomal protein L335.5e-1266.04Show/hide
Query:  KKATMFIRLVSAAGTGFFYVKRK-PTKITEKLEFRKYDPRVNRHVLFTEAKMK
        K+ T+ I+LVS+A TGFFYVK+K P K TEKLEF+KYDP   +HV+F EAKMK
Subjt:  KKATMFIRLVSAAGTGFFYVKRK-PTKITEKLEFRKYDPRVNRHVLFTEAKMK

Q1RGQ4 50S ribosomal protein L336.0e-1162.96Show/hide
Query:  KKKATMFIRLVSAAGTGFFYV-KRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
        KK   + +RLVS AGTGFF V KR P   TEKL FRKYDP+V +HVLF E K+K
Subjt:  KKKATMFIRLVSAAGTGFFYV-KRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

Q2W1A2 50S ribosomal protein L333.2e-1267.92Show/hide
Query:  KKATMFIRLVSAAGTGFFYV-KRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK
        K AT+ I+L+S AGTGFFYV K+ P K TEKLEFRKYDP V +HV F EAK+K
Subjt:  KKATMFIRLVSAAGTGFFYV-KRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK

Arabidopsis top hitse value%identityAlignment
AT3G06320.1 Ribosomal protein L33 family protein1.3e-2186.21Show/hide
Query:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTK-ITEKLEFRKYDPRVNRHVLFTEAKMK
        MGDK+KK  MFIRLVSAAGTGFFYVKRK TK + EKLEFRKYDPRVNRHVLFTE KMK
Subjt:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTK-ITEKLEFRKYDPRVNRHVLFTEAKMK

AT5G18790.1 Ribosomal protein L33 family protein1.3e-2186.21Show/hide
Query:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTK-ITEKLEFRKYDPRVNRHVLFTEAKMK
        MGDK+KK  MFIRLVSAAGTGFFYVKRK TK + EKLEFRKYDPRVNRHVLFTE KMK
Subjt:  MGDKKKKATMFIRLVSAAGTGFFYVKRKPTK-ITEKLEFRKYDPRVNRHVLFTEAKMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGATCTTGCAGTCGGATTGTACTGTATTCATATTTGGTAAGAACTATCAAATGGGTGACAAGAAGAAGAAGGCTACCATGTTCATCAGACTTGTCTCAGCTGCTGG
GACTGGATTTTTCTATGTCAAGAGGAAGCCAACTAAAATAACTGAGAAGCTCGAGTTCCGGAAGTATGATCCTCGGGTGAACCGTCATGTTTTGTTCACAGAAGCCAAAA
TGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGATCTTGCAGTCGGATTGTACTGTATTCATATTTGGTAAGAACTATCAAATGGGTGACAAGAAGAAGAAGGCTACCATGTTCATCAGACTTGTCTCAGCTGCTGG
GACTGGATTTTTCTATGTCAAGAGGAAGCCAACTAAAATAACTGAGAAGCTCGAGTTCCGGAAGTATGATCCTCGGGTGAACCGTCATGTTTTGTTCACAGAAGCCAAAA
TGAAGTGA
Protein sequenceShow/hide protein sequence
MWILQSDCTVFIFGKNYQMGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK