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Spg031287 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031287
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionarabinogalactan peptide 20-like
Genome locationscaffold11:43765684..43766763
RNA-Seq ExpressionSpg031287
SyntenySpg031287
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147463.1 arabinogalactan peptide 20-like [Momordica charantia]5.1e-2990.12Show/hide
Query:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN
        MASS STSRAFS  FT FAL+ FI+SPLVDAHSSAPAP PAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN
Subjt:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN

XP_022924337.1 arabinogalactan peptide 16-like [Cucurbita moschata]1.8e-2989.16Show/hide
Query:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSS--APAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN
        MASS+STSRAFSG FTFF L+LFILSPLVDAHSS  APAP PAPASDGTSIDQG+AYVLML+ALVLTYLIHPLDASSYNFFLN
Subjt:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSS--APAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN

XP_022979386.1 arabinogalactan peptide 20-like [Cucurbita maxima]2.8e-2784.34Show/hide
Query:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSS--APAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN
        MASS+ST RAFSG FTFF L+LFILSPL+DAHSS  +PAP PAPASDGTSIDQG+AYVLML+ALVLTYLIHPLDASS NFFLN
Subjt:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSS--APAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN

XP_023528757.1 arabinogalactan peptide 16-like [Cucurbita pepo subsp. pepo]1.6e-3090.12Show/hide
Query:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN
        MASS+STSRAFSG FTFF L+LFILSPLVDAHSS PAP PAPASDGTSIDQG+AYVLML+ALVLTYLIHPLDASSYNFFLN
Subjt:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN

XP_038905636.1 arabinogalactan protein 41-like [Benincasa hispida]1.8e-2686.42Show/hide
Query:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN
        M SS+STSRAFSG FTFFAL+ FILSPLVDA   APAP PAPASDGTSIDQGIAYVLML+ALVLTYLIHPLDASSY+FFLN
Subjt:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN

TrEMBL top hitse value%identityAlignment
A0A6J1D1D7 arabinogalactan peptide 20-like2.5e-2990.12Show/hide
Query:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN
        MASS STSRAFS  FT FAL+ FI+SPLVDAHSSAPAP PAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN
Subjt:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN

A0A6J1E8M6 arabinogalactan peptide 16-like8.5e-3089.16Show/hide
Query:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSS--APAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN
        MASS+STSRAFSG FTFF L+LFILSPLVDAHSS  APAP PAPASDGTSIDQG+AYVLML+ALVLTYLIHPLDASSYNFFLN
Subjt:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSS--APAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN

A0A6J1F1F2 arabinogalactan peptide 20-like9.7e-2684.81Show/hide
Query:  ASSHSTSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFL
        +SS ST  AFSGFFT FAL+ FILSPLV AHSSA AP PAPASDGTSIDQGIAYVLML+ALVLTYLIHPLDASSY FFL
Subjt:  ASSHSTSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFL

A0A6J1IAU1 arabinogalactan peptide 16-like9.7e-2683.75Show/hide
Query:  ASSHSTSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN
        +SS ST  AFSGFFT FAL+ FIL PLV AHSSA AP PAPASDGTSIDQGIAYVLML+ALVLTYLIHPLDASSY FFLN
Subjt:  ASSHSTSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN

A0A6J1IQM6 arabinogalactan peptide 20-like1.4e-2784.34Show/hide
Query:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSS--APAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN
        MASS+ST RAFSG FTFF L+LFILSPL+DAHSS  +PAP PAPASDGTSIDQG+AYVLML+ALVLTYLIHPLDASS NFFLN
Subjt:  MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSS--APAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 161.8e-1365.15Show/hide
Query:  FTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDA-SSYNFF
        F  F+ +  ++  L  A S APA  PAP SDGTSIDQGIAY+LM++ALVLTYLIHPLDA SSY+FF
Subjt:  FTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDA-SSYNFF

Q8L9T8 Arabinogalactan protein 417.7e-1262.5Show/hide
Query:  STSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIH
        S SR F G  T  +++  IL P+  AH+ + AP PAP SDGT+IDQGIAYVLML+ALVLTYLIH
Subjt:  STSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIH

Q9FK16 Arabinogalactan protein 222.5e-1065.38Show/hide
Query:  FALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIH
        F ++  IL P+  +HSS+PA  PAP SDGTSIDQGIAYVLM++AL LTY IH
Subjt:  FALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIH

Q9M373 Arabinogalactan protein 208.2e-1460.81Show/hide
Query:  SRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDA--SSYNFF
        SR        FA +  ++SP   A S APA  P+P SDGTSIDQGIAY+LM++ALVLTYLIHPLDA  SSY FF
Subjt:  SRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDA--SSYNFF

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 161.3e-1465.15Show/hide
Query:  FTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDA-SSYNFF
        F  F+ +  ++  L  A S APA  PAP SDGTSIDQGIAY+LM++ALVLTYLIHPLDA SSY+FF
Subjt:  FTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDA-SSYNFF

AT3G61640.1 arabinogalactan protein 205.8e-1560.81Show/hide
Query:  SRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDA--SSYNFF
        SR        FA +  ++SP   A S APA  P+P SDGTSIDQGIAY+LM++ALVLTYLIHPLDA  SSY FF
Subjt:  SRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDA--SSYNFF

AT5G24105.1 arabinogalactan protein 415.5e-1362.5Show/hide
Query:  STSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIH
        S SR F G  T  +++  IL P+  AH+ + AP PAP SDGT+IDQGIAYVLML+ALVLTYLIH
Subjt:  STSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIH

AT5G53250.1 arabinogalactan protein 221.8e-1165.38Show/hide
Query:  FALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIH
        F ++  IL P+  +HSS+PA  PAP SDGTSIDQGIAYVLM++AL LTY IH
Subjt:  FALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTCCCATTCCACTTCTAGGGCTTTCTCCGGCTTCTTCACATTCTTCGCTCTCCTCCTCTTCATTCTCTCGCCACTCGTTGACGCGCACTCTTCGGCCCCTGC
TCCCCCTCCCGCTCCCGCAAGCGACGGGACCTCCATAGACCAAGGGATTGCGTACGTGCTGATGCTGTTGGCGTTGGTTCTCACATACCTAATCCATCCTCTCGATGCGT
CTTCCTACAACTTTTTTCTGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCTCCCATTCCACTTCTAGGGCTTTCTCCGGCTTCTTCACATTCTTCGCTCTCCTCCTCTTCATTCTCTCGCCACTCGTTGACGCGCACTCTTCGGCCCCTGC
TCCCCCTCCCGCTCCCGCAAGCGACGGGACCTCCATAGACCAAGGGATTGCGTACGTGCTGATGCTGTTGGCGTTGGTTCTCACATACCTAATCCATCCTCTCGATGCGT
CTTCCTACAACTTTTTTCTGAATTGA
Protein sequenceShow/hide protein sequence
MASSHSTSRAFSGFFTFFALLLFILSPLVDAHSSAPAPPPAPASDGTSIDQGIAYVLMLLALVLTYLIHPLDASSYNFFLN