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Spg031288 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031288
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionhistone deacetylase complex subunit SAP18-like
Genome locationscaffold11:42926768..42929799
RNA-Seq ExpressionSpg031288
SyntenySpg031288
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR010516 - Sin3 associated polypeptide p18
IPR042534 - Sin3 associated polypeptide p18 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147400.1 histone deacetylase complex subunit SAP18 [Momordica charantia]1.9e-7493.92Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PH PPRPR+EPVDREKTCPLLLRVFTK+G HHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII
        LVYPDRHGRF+VREVGKTFSFGNGRLDD+LALA+LGFQIGDYLDVAI+
Subjt:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII

XP_022943948.1 histone deacetylase complex subunit SAP18-like [Cucurbita moschata]6.0e-7696.62Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PHAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII
        LVYPDRHGRF+VREVGKTFSFGNGR DDNLALA+LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII

XP_022974173.1 histone deacetylase complex subunit SAP18-like [Cucurbita maxima]6.0e-7696.62Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PHAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII
        LVYPDRHGRF+VREVGKTFSFGNGR DDNLALA+LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII

XP_023538738.1 histone deacetylase complex subunit SAP18 [Cucurbita pepo subsp. pepo]6.0e-7696.62Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PHAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII
        LVYPDRHGRF+VREVGKTFSFGNGR DDNLALA+LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII

XP_038879427.1 histone deacetylase complex subunit SAP18 [Benincasa hispida]1.6e-7394.59Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGA PR  HAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII
        LVYPDRHGRF++REVGKTFSFGNGRLDD+LALA+LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII

TrEMBL top hitse value%identityAlignment
A0A1S3AVL4 histone deacetylase complex subunit SAP181.0e-7393.92Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR  HAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII
        LVYPDRHGRF++REVGKTFSFGN RLDD+LAL +LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII

A0A5D3D2K7 Histone deacetylase complex subunit SAP181.0e-7393.92Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR  HAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII
        LVYPDRHGRF++REVGKTFSFGN RLDD+LAL +LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII

A0A6J1D024 histone deacetylase complex subunit SAP189.3e-7593.92Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PH PPRPR+EPVDREKTCPLLLRVFTK+G HHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII
        LVYPDRHGRF+VREVGKTFSFGNGRLDD+LALA+LGFQIGDYLDVAI+
Subjt:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII

A0A6J1FXI8 histone deacetylase complex subunit SAP18-like2.9e-7696.62Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PHAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII
        LVYPDRHGRF+VREVGKTFSFGNGR DDNLALA+LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII

A0A6J1IFF7 histone deacetylase complex subunit SAP18-like2.9e-7696.62Show/hide
Query:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
        MAGEAEAPRRAYGAPPR PHAPPRPR+EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA
Subjt:  MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFA

Query:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII
        LVYPDRHGRF+VREVGKTFSFGNGR DDNLALA+LGFQIGDYLDVAII
Subjt:  LVYPDRHGRFLVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII

SwissProt top hitse value%identityAlignment
O00422 Histone deacetylase complex subunit SAP187.4e-2953.72Show/hide
Query:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGNGRL
        +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+E+G T S G    
Subjt:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGNGRL

Query:  DDNLALADLGFQIGDYLDVAI
        DD++ L    FQIGDYLD+AI
Subjt:  DDNLALADLGFQIGDYLDVAI

O55128 Histone deacetylase complex subunit SAP189.7e-2953.72Show/hide
Query:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGNGRL
        +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+E+G T S G    
Subjt:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGNGRL

Query:  DDNLALADLGFQIGDYLDVAI
        DD++ L    FQIGDYLD+AI
Subjt:  DDNLALADLGFQIGDYLDVAI

O64644 Histone deacetylase complex subunit SAP181.6e-4767.33Show/hide
Query:  AEAPRRAYGA-----PPR-VPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS
        AEA RR  G      PPR V   PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVRGKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LS
Subjt:  AEAPRRAYGA-----PPR-VPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS

Query:  FALVYPDRHGRFLVREVGKTFSFGNGRL-DDNLALADLGFQIGDYLDVAI
        FA VYP+  G + VREVG+T ++ N +  DD+  L++L F+IGDYLDVAI
Subjt:  FALVYPDRHGRFLVREVGKTFSFGNGRL-DDNLALADLGFQIGDYLDVAI

Q3T022 Histone deacetylase complex subunit SAP187.4e-2953.72Show/hide
Query:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGNGRL
        +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+E+G T S G    
Subjt:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGNGRL

Query:  DDNLALADLGFQIGDYLDVAI
        DD++ L    FQIGDYLD+AI
Subjt:  DDNLALADLGFQIGDYLDVAI

Q5RDT5 Histone deacetylase complex subunit SAP187.4e-2953.72Show/hide
Query:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGNGRL
        +P+DREKTCPLLLRVFT     H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA+V+ D +   + V+E+G T S G    
Subjt:  EPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPD-RHGRFLVREVGKTFSFGNGRL

Query:  DDNLALADLGFQIGDYLDVAI
        DD++ L    FQIGDYLD+AI
Subjt:  DDNLALADLGFQIGDYLDVAI

Arabidopsis top hitse value%identityAlignment
AT2G45640.1 SIN3 associated polypeptide P181.1e-4867.33Show/hide
Query:  AEAPRRAYGA-----PPR-VPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS
        AEA RR  G      PPR V   PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVRGKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LS
Subjt:  AEAPRRAYGA-----PPR-VPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS

Query:  FALVYPDRHGRFLVREVGKTFSFGNGRL-DDNLALADLGFQIGDYLDVAI
        FA VYP+  G + VREVG+T ++ N +  DD+  L++L F+IGDYLDVAI
Subjt:  FALVYPDRHGRFLVREVGKTFSFGNGRL-DDNLALADLGFQIGDYLDVAI

AT2G45640.2 SIN3 associated polypeptide P181.2e-4565.33Show/hide
Query:  AEAPRRAYGA-----PPR-VPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS
        AEA RR  G      PPR V   PPRP+ EPVDREKTCPLLLRVFTK G HH +ED+AVRGKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LS
Subjt:  AEAPRRAYGA-----PPR-VPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLS

Query:  FALVYPDRHGRFLVREVGKTFSFGNGRL-DDNLALADLGFQIGDYLDVAI
        FA VYP+  G +    VG+T ++ N +  DD+  L++L F+IGDYLDVAI
Subjt:  FALVYPDRHGRFLVREVGKTFSFGNGRL-DDNLALADLGFQIGDYLDVAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGAGAAGCAGAAGCACCAAGGAGGGCTTATGGCGCTCCTCCAAGAGTCCCTCATGCTCCTCCTCGTCCTCGCATGGAGCCCGTCGATCGCGAGAAGACTTGTCC
TTTGCTGCTTCGTGTTTTTACGAAGATTGGGAGTCATCATTTCAATGAAGACTTTGCTGTGAGAGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATG
CTACTCTTCGCGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCTAAACTATCTTTCGCTTTGGTTTATCCTGATAGACATGGCCGGTTT
CTAGTGAGAGAGGTAGGGAAGACATTCTCGTTTGGAAATGGACGATTAGACGACAACTTGGCTTTGGCCGATCTCGGCTTTCAGATTGGAGACTACTTGGATGTGGCCAT
CATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGAGAAGCAGAAGCACCAAGGAGGGCTTATGGCGCTCCTCCAAGAGTCCCTCATGCTCCTCCTCGTCCTCGCATGGAGCCCGTCGATCGCGAGAAGACTTGTCC
TTTGCTGCTTCGTGTTTTTACGAAGATTGGGAGTCATCATTTCAATGAAGACTTTGCTGTGAGAGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATG
CTACTCTTCGCGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCTAAACTATCTTTCGCTTTGGTTTATCCTGATAGACATGGCCGGTTT
CTAGTGAGAGAGGTAGGGAAGACATTCTCGTTTGGAAATGGACGATTAGACGACAACTTGGCTTTGGCCGATCTCGGCTTTCAGATTGGAGACTACTTGGATGTGGCCAT
CATATAG
Protein sequenceShow/hide protein sequence
MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRF
LVREVGKTFSFGNGRLDDNLALADLGFQIGDYLDVAII