; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031313 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031313
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionrac-like GTP-binding protein 5
Genome locationscaffold11:41873215..41877818
RNA-Seq ExpressionSpg031313
SyntenySpg031313
Gene Ontology termsGO:0007015 - actin filament organization (biological process)
GO:0007163 - establishment or maintenance of cell polarity (biological process)
GO:0007264 - small GTPase mediated signal transduction (biological process)
GO:0008360 - regulation of cell shape (biological process)
GO:0030865 - cortical cytoskeleton organization (biological process)
GO:0032956 - regulation of actin cytoskeleton organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005856 - cytoskeleton (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0005938 - cell cortex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042995 - cell projection (cellular component)
GO:0031410 - cytoplasmic vesicle (cellular component)
GO:0080115 - myosin XI tail binding (molecular function)
GO:0019901 - protein kinase binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0003924 - GTPase activity (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR003578 - Small GTPase Rho
IPR005225 - Small GTP-binding protein domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0679457.1 hypothetical protein [Gossypium aridum]1.9e-4963.95Show/hide
Query:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL
        M   +A+   +  TA T+F+KCVT+GDGAVGKTCLLISYT+NTFPTDYVPTVFDNFSANV+ +GQ+VNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSL
Subjt:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL

Query:  ISRASFENVSKKVS-SFPAQSLECLL-----FWFSVMVFRFFFMSFSFGAVDPRVEALCPISAHYSCRDQTR
        ISR S+ENV+KKV  S    +   +L     F   + V  FF      G V PR E LCP SAH SC ++TR
Subjt:  ISRASFENVSKKVS-SFPAQSLECLL-----FWFSVMVFRFFFMSFSFGAVDPRVEALCPISAHYSCRDQTR

XP_022924269.1 rac-like GTP-binding protein 5 [Cucurbita moschata]2.5e-4991.07Show/hide
Query:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL
        M GGAA+A ASA TAATKF+KCV +GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVL NGQSVNLGLWDTAGQEDY+RLRPLSYRGADVFLLAFSL
Subjt:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL

Query:  ISRASFENVSKK
        ISRASFEN+SKK
Subjt:  ISRASFENVSKK

XP_022980411.1 rac-like GTP-binding protein 5 [Cucurbita maxima]2.5e-4991.07Show/hide
Query:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL
        M GGAA+A ASA TAATKF+KCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVL N QSVNLGLWDTAGQEDY+RLRPLSYRGADVFLLAFSL
Subjt:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL

Query:  ISRASFENVSKK
        ISRASFEN+SKK
Subjt:  ISRASFENVSKK

XP_023527852.1 rac-like GTP-binding protein 5 [Cucurbita pepo subsp. pepo]5.0e-5091.96Show/hide
Query:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL
        M GGAA+A ASA TAATKF+KCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVL NGQSVNLGLWDTAGQEDY+RLRPLSYRGADVFLLAFSL
Subjt:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL

Query:  ISRASFENVSKK
        ISRASFEN+SKK
Subjt:  ISRASFENVSKK

XP_038878037.1 rac-like GTP-binding protein 5 [Benincasa hispida]1.8e-4789.29Show/hide
Query:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL
        M GGA    A+ PTAATKF+KCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVL NG+SVNLGLWDTAGQEDY+RLRPLSYRGADVFLLAFSL
Subjt:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL

Query:  ISRASFENVSKK
        ISRASFENVSKK
Subjt:  ISRASFENVSKK

TrEMBL top hitse value%identityAlignment
A0A5A7U1E2 Rac-like GTP-binding protein RAC21.5e-4793.2Show/hide
Query:  ASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENV
        A+APTAATKF+KCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVL NGQSVNLGLWDTAGQEDY+RLRPLSYRGADVFLLAFS ISRASFEN+
Subjt:  ASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENV

Query:  SKK
        SKK
Subjt:  SKK

A0A5D3D3I7 Rac-like GTP-binding protein RAC21.5e-4793.2Show/hide
Query:  ASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENV
        A+APTAATKF+KCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVL NGQSVNLGLWDTAGQEDY+RLRPLSYRGADVFLLAFS ISRASFEN+
Subjt:  ASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENV

Query:  SKK
        SKK
Subjt:  SKK

A0A6J1E8N6 rac-like GTP-binding protein 51.2e-4991.07Show/hide
Query:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL
        M GGAA+A ASA TAATKF+KCV +GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVL NGQSVNLGLWDTAGQEDY+RLRPLSYRGADVFLLAFSL
Subjt:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL

Query:  ISRASFENVSKK
        ISRASFEN+SKK
Subjt:  ISRASFENVSKK

A0A6J1ITI8 rac-like GTP-binding protein 51.2e-4991.07Show/hide
Query:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL
        M GGAA+A ASA TAATKF+KCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVL N QSVNLGLWDTAGQEDY+RLRPLSYRGADVFLLAFSL
Subjt:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL

Query:  ISRASFENVSKK
        ISRASFEN+SKK
Subjt:  ISRASFENVSKK

A0A7J8WWM8 Uncharacterized protein9.3e-5063.95Show/hide
Query:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL
        M   +A+   +  TA T+F+KCVT+GDGAVGKTCLLISYT+NTFPTDYVPTVFDNFSANV+ +GQ+VNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSL
Subjt:  MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL

Query:  ISRASFENVSKKVS-SFPAQSLECLL-----FWFSVMVFRFFFMSFSFGAVDPRVEALCPISAHYSCRDQTR
        ISR S+ENV+KKV  S    +   +L     F   + V  FF      G V PR E LCP SAH SC ++TR
Subjt:  ISRASFENVSKKVS-SFPAQSLECLL-----FWFSVMVFRFFFMSFSFGAVDPRVEALCPISAHYSCRDQTR

SwissProt top hitse value%identityAlignment
P92978 Rac-like GTP-binding protein ARAC114.6e-4688.78Show/hide
Query:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK
        +A++FVKCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+ NG +VNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLIS+AS+ENVSKK
Subjt:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK

Q35638 Rac-like GTP-binding protein RHO16.0e-4687.76Show/hide
Query:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK
        +A++F+KCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+ NG +VNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLIS+AS+ENVSKK
Subjt:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK

Q38902 Rac-like GTP-binding protein ARAC17.8e-4687.76Show/hide
Query:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK
        +A++F+KCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+ NG +VNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLIS+AS+ENVSKK
Subjt:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK

Q39435 Rac-like GTP-binding protein RHO17.8e-4687.76Show/hide
Query:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK
        +A++F+KCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+ NG +VNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLIS+AS+ENVSKK
Subjt:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK

Q9SBJ6 Rac-like GTP-binding protein ARAC67.8e-4687.76Show/hide
Query:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK
        +A++F+KCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+ NG +VNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLIS+AS+ENVSKK
Subjt:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK

Arabidopsis top hitse value%identityAlignment
AT2G17800.1 Arabidopsis RAC-like 15.5e-4787.76Show/hide
Query:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK
        +A++F+KCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+ NG +VNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLIS+AS+ENVSKK
Subjt:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK

AT2G17800.2 Arabidopsis RAC-like 15.5e-4787.76Show/hide
Query:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK
        +A++F+KCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+ NG +VNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLIS+AS+ENVSKK
Subjt:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK

AT3G51300.1 RHO-related protein from plants 13.3e-4788.78Show/hide
Query:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK
        +A++FVKCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+ NG +VNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLIS+AS+ENVSKK
Subjt:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK

AT4G35020.1 RAC-like 31.2e-4685.71Show/hide
Query:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK
        +A++F+KCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+ +G ++NLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSL+S+AS+ENVSKK
Subjt:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK

AT4G35950.1 RAC-like 65.5e-4787.76Show/hide
Query:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK
        +A++F+KCVT+GDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+ NG +VNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLIS+AS+ENVSKK
Subjt:  AATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGCGGCGCCGCCTCTGCTCCGGCAAGTGCACCGACGGCGGCCACGAAGTTCGTTAAGTGTGTGACGATTGGAGATGGCGCCGTGGGAAAGACCTGCCTTCTCAT
TTCTTACACTAGCAACACTTTTCCGACTGATTATGTTCCTACTGTGTTTGACAATTTCAGCGCCAATGTTTTGGCTAATGGGCAGTCTGTGAATTTGGGTCTCTGGGACA
CTGCTGGTCAAGAAGATTATAACAGGCTAAGACCTTTGAGTTACAGAGGAGCTGATGTTTTCCTTCTTGCCTTTTCCCTCATAAGTAGGGCCAGCTTTGAAAATGTATCA
AAGAAAGTAAGTTCATTTCCTGCTCAATCTTTGGAATGTTTATTATTTTGGTTCAGTGTTATGGTATTTAGATTCTTCTTCATGTCTTTTTCTTTTGGAGCAGTGGATCC
CAGAGTTGAGGCATTATGCCCCATCAGTGCCCATTATTCTTGTAGGGACCAAACTAGGTGCCTTTCTTCTTTAACTTTAATTTCATTGCCTGCATTATCAATTCCTTCAC
TCTTAAGTAAATTTCTCATGATTTTTATGGGCTGGGGAAGATTATTCTTGAAGCTCCTACTCGTCCCCCACCCGCCCCTACCCTTGTTCCTCAAATCTGTTCTTTGCATT
GTATGGTATTGTCCTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGCGGCGCCGCCTCTGCTCCGGCAAGTGCACCGACGGCGGCCACGAAGTTCGTTAAGTGTGTGACGATTGGAGATGGCGCCGTGGGAAAGACCTGCCTTCTCAT
TTCTTACACTAGCAACACTTTTCCGACTGATTATGTTCCTACTGTGTTTGACAATTTCAGCGCCAATGTTTTGGCTAATGGGCAGTCTGTGAATTTGGGTCTCTGGGACA
CTGCTGGTCAAGAAGATTATAACAGGCTAAGACCTTTGAGTTACAGAGGAGCTGATGTTTTCCTTCTTGCCTTTTCCCTCATAAGTAGGGCCAGCTTTGAAAATGTATCA
AAGAAAGTAAGTTCATTTCCTGCTCAATCTTTGGAATGTTTATTATTTTGGTTCAGTGTTATGGTATTTAGATTCTTCTTCATGTCTTTTTCTTTTGGAGCAGTGGATCC
CAGAGTTGAGGCATTATGCCCCATCAGTGCCCATTATTCTTGTAGGGACCAAACTAGGTGCCTTTCTTCTTTAACTTTAATTTCATTGCCTGCATTATCAATTCCTTCAC
TCTTAAGTAAATTTCTCATGATTTTTATGGGCTGGGGAAGATTATTCTTGAAGCTCCTACTCGTCCCCCACCCGCCCCTACCCTTGTTCCTCAAATCTGTTCTTTGCATT
GTATGGTATTGTCCTGATTGA
Protein sequenceShow/hide protein sequence
MVGGAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLANGQSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVS
KKVSSFPAQSLECLLFWFSVMVFRFFFMSFSFGAVDPRVEALCPISAHYSCRDQTRCLSSLTLISLPALSIPSLLSKFLMIFMGWGRLFLKLLLVPHPPLPLFLKSVLCI
VWYCPD