; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031341 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031341
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold11:44870206..44875529
RNA-Seq ExpressionSpg031341
SyntenySpg031341
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN72359.1 hypothetical protein VITISV_000131 [Vitis vinifera]3.0e-5431.72Show/hide
Query:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW
        +++ +     GLG G +  RN+AL+ KWLWR+ +E  A W ++I SIYGS S GW  +N+        W  IA  Y  F +F+ F    G  I+FW+D W
Subjt:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW

Query:  CDNHPLKVLFPDLHRLSGKQEATIADCWIAEHQ-AWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPP
            PL V +P L R+   + A I+    +    +W+ + RR L D E+     L++    +++     DK +W+L  SG F+ K  F  L +     P 
Subjt:  CDNHPLKVLFPDLHRLSGKQEATIADCWIAEHQ-AWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPP

Query:  HICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWN
             VW  + P KVK FVW + ++ +NT++ LQ +     LSP  C+LC+K  E +DHLFLHCS    +W  + +S  + +  P  I D +      + 
Subjt:  HICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWN

Query:  LKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQA
           +  ++   A  A +W++W+ERNAR F+ K+ +     +++    S+W +     F    L+M+  DW A
Subjt:  LKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQA

RVW52490.1 putative ribonuclease H protein [Vitis vinifera]3.0e-5431.64Show/hide
Query:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW
        +++ +     GLG G +  RN+AL+ KWLWR+ +E  A W ++I SIYGS S GW  +N         W  IA  +  F +F+ F    G  I+FW+D W
Subjt:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW

Query:  CDNHPLKVLFPDLHRLSGKQEATIAD-CWIAEHQAWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPP
          + PL   +P L  +   + A I+     +   +W+ + RR L D E+    +L+  +  +++     DK +W++  SG F+ KS F  L +     P 
Subjt:  CDNHPLKVLFPDLHRLSGKQEATIAD-CWIAEHQAWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPP

Query:  HICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWN
             VW  + P KVK FVW + ++ LNT++ LQ +  +  LSP+ C+LC+K  E +DHLFLHCS    +W  + +   + +  P  I D  F     + 
Subjt:  HICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWN

Query:  LKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQAL
           K  ++   A  A +W++W+ERNAR F+ K+ +     +++   AS W +     F    L+M+  DW A+
Subjt:  LKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQAL

RVW70235.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]6.1e-5531.99Show/hide
Query:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW
        +++ +     GLG G +  RN+AL+ KWLWR+ +E  A W ++I SIYGS S GW  +N+        W  IA  Y  F +F+ F    G  I+FW+D W
Subjt:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW

Query:  CDNHPLKVLFPDLHRLSGKQEATIADCWIAEHQ-AWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPP
            PL V +P L R+   + A I+    +    +W+ + RR L D E+     L++    +++     DK +W+L  SG F+ KS F  L +     P 
Subjt:  CDNHPLKVLFPDLHRLSGKQEATIADCWIAEHQ-AWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPP

Query:  HICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWN
             VW  + P KVK FVW + ++ +NT++ LQ +     LSP  C+LC+K  E +DHLFLHCS    +W  + +S  + +  P  I D +      + 
Subjt:  HICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWN

Query:  LKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQA
           +  ++   A  A +W++W+ERNAR F+ K+ +     +++    S+W +     F    L+M+  DW A
Subjt:  LKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQA

RVW70235.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]4.1e-0333.33Show/hide
Query:  NESRLEESNEIHEQQVEVRKKLKVELLEITIEEQRSLNQKCKLRWLNEGDENSSFFHKWATAKKNKAFISVLEKDSGEIITREDDIE
        N   LE+   +  + +  R   K EL E+ + E+    QK +++W+ EGD NS FFHK A  ++N+ FI  LE ++G+++   + I+
Subjt:  NESRLEESNEIHEQQVEVRKKLKVELLEITIEEQRSLNQKCKLRWLNEGDENSSFFHKWATAKKNKAFISVLEKDSGEIITREDDIE

RVW70235.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.0e-5431.99Show/hide
Query:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW
        +++ +     GLG G +  RN+AL+ KWLWR+ +E  A W ++I SIYGS S GW  +N+        W  IA  Y  F +F+ F    G  I+FW+D W
Subjt:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW

Query:  CDNHPLKVLFPDLHRLSGKQEATIAD-CWIAEHQAWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPP
            PL V +P L R+   + A I+         +W+ + RR L D E+     L++    +++     DK +W+L  SG F+ KS F  L +     P 
Subjt:  CDNHPLKVLFPDLHRLSGKQEATIAD-CWIAEHQAWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPP

Query:  HICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWN
             VW  + P KVK FVW + ++ +NT++ LQ +     LSP  C+LC+K  E +DHLFLHCS    +W  + +S  + +  P  I D +      + 
Subjt:  HICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWN

Query:  LKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQA
           +  ++   A  A +W++W+ERNAR F+ K+ +     +++    S+W +     F    L+M+  DW A
Subjt:  LKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQA

XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]4.2e-7255.56Show/hide
Query:  SEEVRKINWEEVIVITKRDFHDDWGRILEVMQQQLMETLIINPFHPDKALIKCHSRELADLLTKNQGWVSFGPIILKVEKWNKNAHSRISCIPSYGGWVK
        +EEVR++NWEE IVIT+RDFHDDW RIL  +++Q   + IINPF  DKAL+KC S++LA LL  N+GWV+FGP+ +K+E WN   H R    PSYG WVK
Subjt:  SEEVRKINWEEVIVITKRDFHDDWGRILEVMQQQLMETLIINPFHPDKALIKCHSRELADLLTKNQGWVSFGPIILKVEKWNKNAHSRISCIPSYGGWVK

Query:  IRNLPLHLWNLQTFKAIGDSLGGFIEYEEANSLLIECVEVKIKIKENYCGFIPAEVRIEDGEDQYIVQIVTFQDGSLLIDRVAGIHGTFSSTAVHVFHKG
        IRN+PLHLW+L TFKAIG++LGGFI+Y++ NS  IEC +V IK+K NYCGFIPAE+   DG   +  ++V+F+D   L  +  GIHG FSS A   FH+G
Subjt:  IRNLPLHLWNLQTFKAIGDSLGGFIEYEEANSLLIECVEVKIKIKENYCGFIPAEVRIEDGEDQYIVQIVTFQDGSLLIDRVAGIHGTFSSTAVHVFHKG

Query:  PTDPLFCTADIWRIENGLYYPVVNV
          +    + D WR+ENG  YP VN+
Subjt:  PTDPLFCTADIWRIENGLYYPVVNV

TrEMBL top hitse value%identityAlignment
A0A438GDE7 LINE-1 retrotransposable element ORF2 protein3.0e-5531.99Show/hide
Query:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW
        +++ +     GLG G +  RN+AL+ KWLWR+ +E  A W ++I SIYGS S GW  +N+        W  IA  Y  F +F+ F    G  I+FW+D W
Subjt:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW

Query:  CDNHPLKVLFPDLHRLSGKQEATIADCWIAEHQ-AWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPP
            PL V +P L R+   + A I+    +    +W+ + RR L D E+     L++    +++     DK +W+L  SG F+ KS F  L +     P 
Subjt:  CDNHPLKVLFPDLHRLSGKQEATIADCWIAEHQ-AWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPP

Query:  HICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWN
             VW  + P KVK FVW + ++ +NT++ LQ +     LSP  C+LC+K  E +DHLFLHCS    +W  + +S  + +  P  I D +      + 
Subjt:  HICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWN

Query:  LKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQA
           +  ++   A  A +W++W+ERNAR F+ K+ +     +++    S+W +     F    L+M+  DW A
Subjt:  LKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQA

A0A438GDE7 LINE-1 retrotransposable element ORF2 protein2.0e-0333.33Show/hide
Query:  NESRLEESNEIHEQQVEVRKKLKVELLEITIEEQRSLNQKCKLRWLNEGDENSSFFHKWATAKKNKAFISVLEKDSGEIITREDDIE
        N   LE+   +  + +  R   K EL E+ + E+    QK +++W+ EGD NS FFHK A  ++N+ FI  LE ++G+++   + I+
Subjt:  NESRLEESNEIHEQQVEVRKKLKVELLEITIEEQRSLNQKCKLRWLNEGDENSSFFHKWATAKKNKAFISVLEKDSGEIITREDDIE

A0A438GDE7 LINE-1 retrotransposable element ORF2 protein5.0e-5531.99Show/hide
Query:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW
        +++ +     GLG G +  RN+AL+ KWLWR+ +E  A W ++I SIYGS S GW  +N+        W  IA  Y  F +F+ F    G  I+FW+D W
Subjt:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW

Query:  CDNHPLKVLFPDLHRLSGKQEATIAD-CWIAEHQAWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPP
            PL V +P L R+   + A I+         +W+ + RR L D E+     L++    +++     DK +W+L  SG F+ KS F  L +     P 
Subjt:  CDNHPLKVLFPDLHRLSGKQEATIAD-CWIAEHQAWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPP

Query:  HICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWN
             VW  + P KVK FVW + ++ +NT++ LQ +     LSP  C+LC+K  E +DHLFLHCS    +W  + +S  + +  P  I D +      + 
Subjt:  HICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWN

Query:  LKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQA
           +  ++   A  A +W++W+ERNAR F+ K+ +     +++    S+W +     F    L+M+  DW A
Subjt:  LKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQA

A0A6J1D6X4 uncharacterized protein LOC1110181862.0e-7255.56Show/hide
Query:  SEEVRKINWEEVIVITKRDFHDDWGRILEVMQQQLMETLIINPFHPDKALIKCHSRELADLLTKNQGWVSFGPIILKVEKWNKNAHSRISCIPSYGGWVK
        +EEVR++NWEE IVIT+RDFHDDW RIL  +++Q   + IINPF  DKAL+KC S++LA LL  N+GWV+FGP+ +K+E WN   H R    PSYG WVK
Subjt:  SEEVRKINWEEVIVITKRDFHDDWGRILEVMQQQLMETLIINPFHPDKALIKCHSRELADLLTKNQGWVSFGPIILKVEKWNKNAHSRISCIPSYGGWVK

Query:  IRNLPLHLWNLQTFKAIGDSLGGFIEYEEANSLLIECVEVKIKIKENYCGFIPAEVRIEDGEDQYIVQIVTFQDGSLLIDRVAGIHGTFSSTAVHVFHKG
        IRN+PLHLW+L TFKAIG++LGGFI+Y++ NS  IEC +V IK+K NYCGFIPAE+   DG   +  ++V+F+D   L  +  GIHG FSS A   FH+G
Subjt:  IRNLPLHLWNLQTFKAIGDSLGGFIEYEEANSLLIECVEVKIKIKENYCGFIPAEVRIEDGEDQYIVQIVTFQDGSLLIDRVAGIHGTFSSTAVHVFHKG

Query:  PTDPLFCTADIWRIENGLYYPVVNV
          +    + D WR+ENG  YP VN+
Subjt:  PTDPLFCTADIWRIENGLYYPVVNV

A5C377 Uncharacterized protein1.1e-5431.91Show/hide
Query:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW
        +++ +     GLG G +  RN+AL+ KWLWR+ +E  A W ++I SIYGS S GW  +N         W  IA  +  F +F+ F    G  I+FW+D W
Subjt:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW

Query:  CDNHPLKVLFPDLHRLSGKQEATIADCW-IAEHQAWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKL---LEVPPK
          + PL   +P L  +   + A I+     +   +W+ + RR L D E+    +L+  +  +++     DK +W++  SG F+ KS F  L    E PP 
Subjt:  CDNHPLKVLFPDLHRLSGKQEATIADCW-IAEHQAWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKL---LEVPPK

Query:  IPPHICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLA
         P      VW  + P KVK FVW + ++ LNT++ LQ +  +  LSP+ C+LC+K  E +DHLFLHCS    +W  + +   + +  P  I D  F    
Subjt:  IPPHICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLA

Query:  AWNLKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQAL
         +    +  ++   A  A +W++W+ERNAR F+ K+ +     ++++  AS W +     F    L+M+  DW A+
Subjt:  AWNLKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQAL

A5C377 Uncharacterized protein1.2e-0334.44Show/hide
Query:  VKSNESRLEESNEIHEQQVEVRKKLKVELLEITIEEQRSLNQKCKLRWLNEGDENSSFFHKWATAKKNKAFISVLEKDSGEIITREDDIE
        V +N   LE+   + ++ +  R   K EL E+ + E+    QK +++W+ EGD NS FFHK A  ++N+ FI  LE +SG ++   + I+
Subjt:  VKSNESRLEESNEIHEQQVEVRKKLKVELLEITIEEQRSLNQKCKLRWLNEGDENSSFFHKWATAKKNKAFISVLEKDSGEIITREDDIE

A5C377 Uncharacterized protein1.5e-5431.72Show/hide
Query:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW
        +++ +     GLG G +  RN+AL+ KWLWR+ +E  A W ++I SIYGS S GW  +N+        W  IA  Y  F +F+ F    G  I+FW+D W
Subjt:  EIITREDDIEGLGIGSLQHRNIALMIKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRW

Query:  CDNHPLKVLFPDLHRLSGKQEATIADCWIAEHQ-AWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPP
            PL V +P L R+   + A I+    +    +W+ + RR L D E+     L++    +++     DK +W+L  SG F+ K  F  L +     P 
Subjt:  CDNHPLKVLFPDLHRLSGKQEATIADCWIAEHQ-AWDLSLRRGLLDRELTSWSALIEKIHLINLVEG-QDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPP

Query:  HICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWN
             VW  + P KVK FVW + ++ +NT++ LQ +     LSP  C+LC+K  E +DHLFLHCS    +W  + +S  + +  P  I D +      + 
Subjt:  HICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWN

Query:  LKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQA
           +  ++   A  A +W++W+ERNAR F+ K+ +     +++    S+W +     F    L+M+  DW A
Subjt:  LKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNSFCNYSLSMIINDWQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G45063.1 copper ion binding;electron carriers3.3e-0630.77Show/hide
Query:  KFSNWTLS-PSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKI-EDWVFEGLAAW----NLKGKAKIIASCAFRATLWLLWKERNARSF
        +F +W +  PS C LC    E   H+F  C F+ +VWSF        FC  +++    +F+  A W        K   I   A++A+++ +W+ERN R  
Subjt:  KFSNWTLS-PSACRLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKI-EDWVFEGLAAW----NLKGKAKIIASCAFRATLWLLWKERNARSF

Query:  DGKS
          KS
Subjt:  DGKS

AT3G25270.1 Ribonuclease H-like superfamily protein3.5e-0828.4Show/hide
Query:  PPKIPPHICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIA------KSLGLSFCMPSKI
        PP     I  ++WK K+  K+K F+W LL  +L T + L+++      +   C  C +  E   HLF  C +A QVW          ++ G++  M +K+
Subjt:  PPKIPPHICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSACRLCVKAAERLDHLFLHCSFAGQVWSFIA------KSLGLSFCMPSKI

Query:  EDWVFEGLAAWNLKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWW
        E  +   LA  N + +   +A       LW LWK RN   F  KS S     +  ++    W
Subjt:  EDWVFEGLAAWNLKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWW

AT4G05095.1 BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT4G04650.1)2.8e-0532.73Show/hide
Query:  WTLS-PSACRLCVKAAERLDHLFLHCSFAGQVW-SFIAKSLGLSFCMPSKIED---WVFEGLAAWNLKGKAKIIASCAFRATLWLLWKERNARSFDGKST
        W LS PS C LC   AE  +HLF  C  +  VW +F+ ++   S   P    D   WV       N+     +I    F+A+++ LWKERN R  D  S 
Subjt:  WTLS-PSACRLCVKAAERLDHLFLHCSFAGQVW-SFIAKSLGLSFCMPSKIED---WVFEGLAAWNLKGKAKIIASCAFRATLWLLWKERNARSFDGKST

Query:  SLVIFCENVQ
        S     + ++
Subjt:  SLVIFCENVQ

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.4e-1029.58Show/hide
Query:  GNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRWCDNHPLKVLFPDL-HRLSG-KQEATIADCWIAEHQAW-DLSLRRGLLDRELTSWSALIEKIHLI
        G+ +W  I    P+  +F       G    FW + W +  PL  L  DL  R+SG  + A++AD  + +   W + S  R  + + L +   L   ++L 
Subjt:  GNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRWCDNHPLKVLFPDL-HRLSG-KQEATIADCWIAEHQAW-DLSLRRGLLDRELTSWSALIEKIHLI

Query:  NLVEGQDKL-NWTLGGSGK---FSTKSMFQKLLEVPPKIPPHICNQVW-KHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLS-PSACRLCVKAAERL
          V+ +D L  W +GGS     FS+ + +  L  V  K+  H    +W K + PK   +  W  +   L T +KL     +W L  PS C LC    E  
Subjt:  NLVEGQDKL-NWTLGGSGK---FSTKSMFQKLLEVPPKIPPHICNQVW-KHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLS-PSACRLCVKAAERL

Query:  DHLFLHCSFAGQV
         HLF  C FAG++
Subjt:  DHLFLHCSFAGQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACATACCTGTGTGCAGAGGATGCTCTGAAGAAGTTAGAAAGATTAATTGGGAAGAAGTCATAGTTATTACTAAAAGAGACTTTCACGATGATTGGGGAAGAATTCTTGA
AGTGATGCAACAACAGTTGATGGAGACCCTTATTATTAACCCCTTTCACCCGGACAAGGCCCTGATTAAATGCCATTCCAGAGAGCTGGCTGACCTGTTAACTAAAAATC
AGGGGTGGGTAAGTTTTGGCCCGATTATCTTAAAGGTTGAGAAATGGAACAAAAATGCTCATAGCAGAATTAGTTGTATTCCGAGCTACGGGGGGTGGGTCAAGATTCGA
AACCTTCCTTTGCATTTATGGAATCTGCAGACATTTAAAGCCATAGGGGACAGTCTTGGAGGGTTTATTGAATATGAAGAAGCAAACTCCCTGCTCATTGAATGCGTGGA
AGTCAAAATAAAAATCAAGGAGAACTACTGTGGATTTATTCCGGCTGAAGTCCGAATCGAAGATGGAGAAGACCAGTACATCGTGCAAATCGTCACCTTCCAAGATGGTT
CTTTGCTGATAGACCGAGTGGCCGGAATTCATGGCACCTTCTCATCGACGGCAGTTCATGTCTTCCACAAAGGTCCTACGGATCCTCTCTTTTGCACAGCAGATATTTGG
AGAATCGAAAATGGCTTGTATTATCCAGTGGTTAATGTCCCTCAGTCGGTTGATGAGCCCAGGATATGTGGAGGACAGCTGGATGGCAATAAAGTAGATTTTGAAATCTC
CCGCCTAAGAACTAAAGGAAAATACAAAGAGGAAGCTGGGCCCTCAAAGTGTGCGGTTATTCCTGTCCGAGTCGAAGCCCAGCCCATTTTGGTCCAGCCTGATGGCCCCT
CAACGAGCGCGGTTGTCCCAGCCCAAATCGAAGCCCATTCTGATTTAGATCATGGTGACTGGATAGTGAAAAAATCTAAAAAGGAAAAGAGAAAAGGAGTTTCTTTTGCC
AAGGAGGCCCAGATCACATTGTTTAAACAGGGGGAGGTCCATCACACTCAAAAAATTCCCAGCCCTCATTCGAAAGGAGTAACGGCCGACACTTGGAATGGAGAGCAAGT
CCTCGAATCTGATTTGTCTTTCTCGAGCCCAGCAAGCTTAGACGGTGAAGGCGGGAAAGATAGCGGTCTTAGCAGCAGGAAGGCCTCCGATAGTGATATCCCAGAAGGCT
ATCAGTTATGCTTTTCCACTGATACTGATCAAGATATTAGCTCGATACCTCTTAGTGTGGAGGAATCTATAGAGTTGGCGGAAGAAGTGCCTAGTACCAGTAAGGAGGAA
ACGATCCAGAGTCTGAAAGCTCCCCTAGAGTGCAGAACCAATGGAGAAGTTATGCACAAAGAAAATCATTTGCTCCATCCAAAGGCTCTAGCTATAATCCCTTCAGGCAA
AGATGACAGAGATGATATAGAAACAGAAAATGGGGAGCTCCTGTTAAGTAAAGAGCTAATTCTCACCCTTAGAAGGAATAACTTATGCATTAGGCCGATAGTTGGCTCTA
GTGCTAAGAAAGGCAACTCTACCAAGAAAAAGCGCAACAGGGAAGTTACCAACCTTTTTAGAACGTGGGAGAAAGAAGTAGAGCCTATCATAGAAGAGGAAAATGGCAAT
GTTAGCTTTAGTGAGGTTAAGAGTAATGAATCCAGATTGGAGGAAAGTAATGAGATTCATGAGCAACAAGTGGAAGTCAGAAAGAAGCTTAAAGTTGAGTTGCTGGAAAT
CACCATAGAAGAGCAAAGAAGCCTCAATCAGAAGTGCAAGCTTAGATGGTTAAATGAGGGGGATGAAAACTCCTCCTTCTTCCATAAATGGGCCACAGCTAAGAAAAACA
AAGCTTTTATTTCGGTTTTGGAGAAAGACAGCGGGGAAATCATCACCAGAGAAGATGATATTGAAGGGTTGGGAATTGGTTCCCTTCAGCATCGAAATATTGCGCTCATG
ATTAAGTGGCTGTGGCGGTTTTCTCAAGAAAAGGATGCGTTTTGGAGGAAAATCATTGCTAGTATATATGGCTCGTGCTCATTAGGGTGGAAGTCTGATAACCTTAAAGG
GCGTAGGGGCAATAGAGTGTGGGTGGATATAGCAGCTAACTACCCGCTATTTGATCAGTTTTCGGCTTTCACTGCTATGTGTGGGGCCAATATCAAATTTTGGGAAGATC
GTTGGTGTGATAACCATCCCTTGAAAGTCCTCTTCCCTGATTTACATAGGCTTTCCGGTAAGCAAGAAGCTACGATTGCAGATTGTTGGATAGCTGAGCATCAAGCGTGG
GATCTTTCCCTTAGGAGGGGGCTCCTTGACCGAGAATTGACTAGTTGGTCGGCTCTTATTGAGAAAATCCATTTGATTAACCTGGTGGAAGGGCAAGATAAGTTAAATTG
GACCCTTGGTGGTTCAGGTAAGTTTTCGACTAAGTCTATGTTCCAAAAGCTCTTGGAAGTGCCTCCCAAAATCCCCCCTCATATATGTAATCAAGTGTGGAAGCATAAAA
GCCCGAAAAAAGTTAAAGTTTTTGTGTGGTCGTTGTTGTACCGTAGCCTTAATACGGATGAGAAACTCCAAAAAAAATTCAGCAATTGGACCCTATCTCCCTCAGCGTGC
AGATTATGCGTCAAGGCTGCAGAGAGGTTAGATCATTTGTTTTTGCATTGCAGTTTTGCGGGTCAAGTTTGGAGTTTTATTGCCAAGAGTTTGGGATTGTCTTTTTGTAT
GCCTAGTAAGATTGAAGATTGGGTGTTCGAGGGGTTGGCTGCGTGGAACCTGAAAGGAAAGGCCAAGATCATAGCTAGTTGTGCGTTTAGGGCGACGTTGTGGCTTCTTT
GGAAGGAAAGAAATGCTAGATCGTTCGATGGCAAGTCTACTAGTTTGGTCATTTTTTGTGAAAATGTACAGAGTACAGCTTCGTGGTGGATTTCGTTATACAGGAATTCT
TTTTGTAATTATAGTCTGTCCATGATTATTAACGATTGGCAGGCGCTCCAGATGTAG
mRNA sequenceShow/hide mRNA sequence
GACATACCTGTGTGCAGAGGATGCTCTGAAGAAGTTAGAAAGATTAATTGGGAAGAAGTCATAGTTATTACTAAAAGAGACTTTCACGATGATTGGGGAAGAATTCTTGA
AGTGATGCAACAACAGTTGATGGAGACCCTTATTATTAACCCCTTTCACCCGGACAAGGCCCTGATTAAATGCCATTCCAGAGAGCTGGCTGACCTGTTAACTAAAAATC
AGGGGTGGGTAAGTTTTGGCCCGATTATCTTAAAGGTTGAGAAATGGAACAAAAATGCTCATAGCAGAATTAGTTGTATTCCGAGCTACGGGGGGTGGGTCAAGATTCGA
AACCTTCCTTTGCATTTATGGAATCTGCAGACATTTAAAGCCATAGGGGACAGTCTTGGAGGGTTTATTGAATATGAAGAAGCAAACTCCCTGCTCATTGAATGCGTGGA
AGTCAAAATAAAAATCAAGGAGAACTACTGTGGATTTATTCCGGCTGAAGTCCGAATCGAAGATGGAGAAGACCAGTACATCGTGCAAATCGTCACCTTCCAAGATGGTT
CTTTGCTGATAGACCGAGTGGCCGGAATTCATGGCACCTTCTCATCGACGGCAGTTCATGTCTTCCACAAAGGTCCTACGGATCCTCTCTTTTGCACAGCAGATATTTGG
AGAATCGAAAATGGCTTGTATTATCCAGTGGTTAATGTCCCTCAGTCGGTTGATGAGCCCAGGATATGTGGAGGACAGCTGGATGGCAATAAAGTAGATTTTGAAATCTC
CCGCCTAAGAACTAAAGGAAAATACAAAGAGGAAGCTGGGCCCTCAAAGTGTGCGGTTATTCCTGTCCGAGTCGAAGCCCAGCCCATTTTGGTCCAGCCTGATGGCCCCT
CAACGAGCGCGGTTGTCCCAGCCCAAATCGAAGCCCATTCTGATTTAGATCATGGTGACTGGATAGTGAAAAAATCTAAAAAGGAAAAGAGAAAAGGAGTTTCTTTTGCC
AAGGAGGCCCAGATCACATTGTTTAAACAGGGGGAGGTCCATCACACTCAAAAAATTCCCAGCCCTCATTCGAAAGGAGTAACGGCCGACACTTGGAATGGAGAGCAAGT
CCTCGAATCTGATTTGTCTTTCTCGAGCCCAGCAAGCTTAGACGGTGAAGGCGGGAAAGATAGCGGTCTTAGCAGCAGGAAGGCCTCCGATAGTGATATCCCAGAAGGCT
ATCAGTTATGCTTTTCCACTGATACTGATCAAGATATTAGCTCGATACCTCTTAGTGTGGAGGAATCTATAGAGTTGGCGGAAGAAGTGCCTAGTACCAGTAAGGAGGAA
ACGATCCAGAGTCTGAAAGCTCCCCTAGAGTGCAGAACCAATGGAGAAGTTATGCACAAAGAAAATCATTTGCTCCATCCAAAGGCTCTAGCTATAATCCCTTCAGGCAA
AGATGACAGAGATGATATAGAAACAGAAAATGGGGAGCTCCTGTTAAGTAAAGAGCTAATTCTCACCCTTAGAAGGAATAACTTATGCATTAGGCCGATAGTTGGCTCTA
GTGCTAAGAAAGGCAACTCTACCAAGAAAAAGCGCAACAGGGAAGTTACCAACCTTTTTAGAACGTGGGAGAAAGAAGTAGAGCCTATCATAGAAGAGGAAAATGGCAAT
GTTAGCTTTAGTGAGGTTAAGAGTAATGAATCCAGATTGGAGGAAAGTAATGAGATTCATGAGCAACAAGTGGAAGTCAGAAAGAAGCTTAAAGTTGAGTTGCTGGAAAT
CACCATAGAAGAGCAAAGAAGCCTCAATCAGAAGTGCAAGCTTAGATGGTTAAATGAGGGGGATGAAAACTCCTCCTTCTTCCATAAATGGGCCACAGCTAAGAAAAACA
AAGCTTTTATTTCGGTTTTGGAGAAAGACAGCGGGGAAATCATCACCAGAGAAGATGATATTGAAGGGTTGGGAATTGGTTCCCTTCAGCATCGAAATATTGCGCTCATG
ATTAAGTGGCTGTGGCGGTTTTCTCAAGAAAAGGATGCGTTTTGGAGGAAAATCATTGCTAGTATATATGGCTCGTGCTCATTAGGGTGGAAGTCTGATAACCTTAAAGG
GCGTAGGGGCAATAGAGTGTGGGTGGATATAGCAGCTAACTACCCGCTATTTGATCAGTTTTCGGCTTTCACTGCTATGTGTGGGGCCAATATCAAATTTTGGGAAGATC
GTTGGTGTGATAACCATCCCTTGAAAGTCCTCTTCCCTGATTTACATAGGCTTTCCGGTAAGCAAGAAGCTACGATTGCAGATTGTTGGATAGCTGAGCATCAAGCGTGG
GATCTTTCCCTTAGGAGGGGGCTCCTTGACCGAGAATTGACTAGTTGGTCGGCTCTTATTGAGAAAATCCATTTGATTAACCTGGTGGAAGGGCAAGATAAGTTAAATTG
GACCCTTGGTGGTTCAGGTAAGTTTTCGACTAAGTCTATGTTCCAAAAGCTCTTGGAAGTGCCTCCCAAAATCCCCCCTCATATATGTAATCAAGTGTGGAAGCATAAAA
GCCCGAAAAAAGTTAAAGTTTTTGTGTGGTCGTTGTTGTACCGTAGCCTTAATACGGATGAGAAACTCCAAAAAAAATTCAGCAATTGGACCCTATCTCCCTCAGCGTGC
AGATTATGCGTCAAGGCTGCAGAGAGGTTAGATCATTTGTTTTTGCATTGCAGTTTTGCGGGTCAAGTTTGGAGTTTTATTGCCAAGAGTTTGGGATTGTCTTTTTGTAT
GCCTAGTAAGATTGAAGATTGGGTGTTCGAGGGGTTGGCTGCGTGGAACCTGAAAGGAAAGGCCAAGATCATAGCTAGTTGTGCGTTTAGGGCGACGTTGTGGCTTCTTT
GGAAGGAAAGAAATGCTAGATCGTTCGATGGCAAGTCTACTAGTTTGGTCATTTTTTGTGAAAATGTACAGAGTACAGCTTCGTGGTGGATTTCGTTATACAGGAATTCT
TTTTGTAATTATAGTCTGTCCATGATTATTAACGATTGGCAGGCGCTCCAGATGTAG
Protein sequenceShow/hide protein sequence
DIPVCRGCSEEVRKINWEEVIVITKRDFHDDWGRILEVMQQQLMETLIINPFHPDKALIKCHSRELADLLTKNQGWVSFGPIILKVEKWNKNAHSRISCIPSYGGWVKIR
NLPLHLWNLQTFKAIGDSLGGFIEYEEANSLLIECVEVKIKIKENYCGFIPAEVRIEDGEDQYIVQIVTFQDGSLLIDRVAGIHGTFSSTAVHVFHKGPTDPLFCTADIW
RIENGLYYPVVNVPQSVDEPRICGGQLDGNKVDFEISRLRTKGKYKEEAGPSKCAVIPVRVEAQPILVQPDGPSTSAVVPAQIEAHSDLDHGDWIVKKSKKEKRKGVSFA
KEAQITLFKQGEVHHTQKIPSPHSKGVTADTWNGEQVLESDLSFSSPASLDGEGGKDSGLSSRKASDSDIPEGYQLCFSTDTDQDISSIPLSVEESIELAEEVPSTSKEE
TIQSLKAPLECRTNGEVMHKENHLLHPKALAIIPSGKDDRDDIETENGELLLSKELILTLRRNNLCIRPIVGSSAKKGNSTKKKRNREVTNLFRTWEKEVEPIIEEENGN
VSFSEVKSNESRLEESNEIHEQQVEVRKKLKVELLEITIEEQRSLNQKCKLRWLNEGDENSSFFHKWATAKKNKAFISVLEKDSGEIITREDDIEGLGIGSLQHRNIALM
IKWLWRFSQEKDAFWRKIIASIYGSCSLGWKSDNLKGRRGNRVWVDIAANYPLFDQFSAFTAMCGANIKFWEDRWCDNHPLKVLFPDLHRLSGKQEATIADCWIAEHQAW
DLSLRRGLLDRELTSWSALIEKIHLINLVEGQDKLNWTLGGSGKFSTKSMFQKLLEVPPKIPPHICNQVWKHKSPKKVKVFVWSLLYRSLNTDEKLQKKFSNWTLSPSAC
RLCVKAAERLDHLFLHCSFAGQVWSFIAKSLGLSFCMPSKIEDWVFEGLAAWNLKGKAKIIASCAFRATLWLLWKERNARSFDGKSTSLVIFCENVQSTASWWISLYRNS
FCNYSLSMIINDWQALQM