; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031350 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031350
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationscaffold11:41342673..41354923
RNA-Seq ExpressionSpg031350
SyntenySpg031350
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017250619.1 PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus]2.7e-2927.01Show/hide
Query:  WDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKVWWQSLWNSGLPTKIKLFIWKAYHECLPTNYCL
        W+   +R+     D++LI  IP+S  +  D W WHY+  GNY+VKSGYKL    ++    SS  VM  WW+  W + +P KI +F W+ YHE LPT   L
Subjt:  WDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKVWWQSLWNSGLPTKIKLFIWKAYHECLPTNYCL

Query:  WKRKILGRPTCPMCNSEIETIDHALCGCIRARSIC-------------DCTFTRIDDQITE------------TT-------------QKKSSDGSISIQ
          RKI     CP+C    ++  HA+  C  A+ +              + +F  +   ITE            TT             QK+ +   I + 
Subjt:  WKRKILGRPTCPMCNSEIETIDHALCGCIRARSIC-------------DCTFTRIDDQITE------------TT-------------QKKSSDGSISIQ

Query:  LK---DHILNGKKSTVR---------------------VYTDAAVIPNRSGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQ
        L    + I N   S  R                     ++ DAA+  N    G G AI+   N  +  +    +  L+ L AE  A++  L+  Q   Y 
Subjt:  LK---DHILNGKKSTVR---------------------VYTDAAVIPNRSGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQ

Query:  EAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALAKHALAHTSNMLWLSD
          +V +DS + ++ +  E + + ++   I   ++L + F  +   ++ RN N++A+ LA+ AL     + WL D
Subjt:  EAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALAKHALAHTSNMLWLSD

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.1e-3530.57Show/hide
Query:  WDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKVWWQSLWNSGLPTKIKLFIWKAYHECLPTNYCL
        WD++ +      ED  LI ++PISS N+ D W+WHY K GNYSV+SGYKL M    +   +S N     W S+W   +PTKIK+FIW++ HE +PT   L
Subjt:  WDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKVWWQSLWNSGLPTKIKLFIWKAYHECLPTNYCL

Query:  WKRKILGRPTCPMCNSEIETIDHALCGCIRARSI---------C-----DCTFTRIDDQITETTQKKSSD-----GSISIQLKDHILNGKK---------
          R I   P C +C    E+I HA   C RAR I         C     + +F  +   +TE  + K  +     G      ++ +++GK+         
Subjt:  WKRKILGRPTCPMCNSEIETIDHALCGCIRARSI---------C-----DCTFTRIDDQITETTQKKSSD-----GSISIQLKDHILNGKK---------

Query:  -------------------------------------STVRVYTDAAVIPNRSGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRL
                                              ++++ TDAA     + T +G  I      L  A  +     L+PL AE++ IL+ L+     
Subjt:  -------------------------------------STVRVYTDAAVIPNRSGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRL

Query:  QYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALAKHALAHTS-NMLWLSDFPPWLLSL
         +   +V SDS+ AI++I  E+ T  D  +W+  IQ L   F  ISF +  R  N  A+ LAK  +   S    WL +FP WLL L
Subjt:  QYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALAKHALAHTS-NMLWLSDFPPWLLSL

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]3.6e-2926.18Show/hide
Query:  RSRTRWDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKVWWQSLWNSGLPTKIKLFIWKAYHECLP
        ++  +WD  KLR+   + D   I  IP+ +    D  +WHY K GNYSVKSGY+LA+ S      S       +W +LW   LP K+K+F+W+A +  LP
Subjt:  RSRTRWDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKVWWQSLWNSGLPTKIKLFIWKAYHECLP

Query:  TNYCLWKRKILGRPTCPMCNSEIETIDHALCGCIRARSI--------------CDCTFTRIDDQITETTQ------------------------------
        +   LWKRK++  PTC  C   +ETI HAL  C  AR I                  F+ + +   E  +                              
Subjt:  TNYCLWKRKILGRPTCPMCNSEIETIDHALCGCIRARSI--------------CDCTFTRIDDQITETTQ------------------------------

Query:  ----------------KKSSDGSISIQLKD---HILNGKKSTVRVYTDAAVIPNRSGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLI
                        +K     ISI +K+     L   ++  +V  DAA        G G  I      +  A      +  +   AE +A+L  L+L 
Subjt:  ----------------KKSSDGSISIQLKD---HILNGKKSTVRVYTDAAVIPNRSGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLI

Query:  QRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALAKHALAHTSNMLWLSDFP
        +        + SD +  ++++     + +++   I +IQ+  ++F+ +   +IPR+ N  A+ LAK AL   S  +WL + P
Subjt:  QRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALAKHALAHTSNMLWLSDFP

XP_027154988.1 uncharacterized protein LOC113755115 [Coffea eugenioides]2.6e-3229.55Show/hide
Query:  RWDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSS----RSGG---ESSRNVMK-VWWQSLWNSGLPTKIKLFIWKAYH
        +W+   L++   ++DV LI  IP S     D+ +W +SK+G Y+ K+GY +A  +     R  G   ESS  + K   W+ LW+  +  K+K F+WK   
Subjt:  RWDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSS----RSGG---ESSRNVMK-VWWQSLWNSGLPTKIKLFIWKAYH

Query:  ECLPTNYCLWKRKILGRPTCPMCNSEIETIDHALCGCIRARSICDCTFTRIDDQITETTQKKSSDGSISIQLKDHILNGKKSTVRVYTDAAVIPNRSGTG
         CLPTN  ++KR   G   C  C  E+ETI+H    C  A         R   Q +  TQ +S   + + QL+D +       V +YTDAA+      TG
Subjt:  ECLPTNYCLWKRKILGRPTCPMCNSEIETIDHALCGCIRARSICDCTFTRIDDQITETTQKKSSDGSISIQLKDHILNGKKSTVRVYTDAAVIPNRSGTG

Query:  YGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNL
         G+       ++  A  +V          E  A+  AL + ++  +++  V SD  +A+  I +  +    +A  +  +QDL + F   SF++I R  N 
Subjt:  YGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNL

Query:  RAYALAKHALAHTSNMLWLSDFPPWLLSLEEEQTRG-----LGQLGSTHMVG
         ++ALA  A+    N+ W +DFP WL+ L  ++ R      +  L   H++G
Subjt:  RAYALAKHALAHTSNMLWLSDFPPWLLSLEEEQTRG-----LGQLGSTHMVG

XP_027157225.1 uncharacterized protein LOC113758655 [Coffea eugenioides]5.9e-3230.15Show/hide
Query:  RWDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSS----RSGG---ESSRNVMK-VWWQSLWNSGLPTKIKLFIWKAYH
        +W+   L++   ++DV LI  IP S     D+ +W +SK+G Y+ K+GY +A  +     R  G   ESS  + K   W+ LW+  +  K+K F+WK   
Subjt:  RWDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSS----RSGG---ESSRNVMK-VWWQSLWNSGLPTKIKLFIWKAYH

Query:  ECLPTNYCLWKRKILGRPTCPMCNSEIETIDHALCGCIRARSICDCTFTRIDDQITETTQKKSSDGSISIQLKDHILNGKKSTVRVYTDAAVIPNRSGTG
         CLPTN  ++KR   G   C  C  E+ETI+H    C  A         R   Q +  TQ +S   + + QL+D +       V +YTDAA+      TG
Subjt:  ECLPTNYCLWKRKILGRPTCPMCNSEIETIDHALCGCIRARSICDCTFTRIDDQITETTQKKSSDGSISIQLKDHILNGKKSTVRVYTDAAVIPNRSGTG

Query:  YGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNL
         G+       ++  A  +V          E  A+  AL + ++  +++  V SD  +A+  I +  +    +A  +  +QDL + F   SF++I R  N 
Subjt:  YGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNL

Query:  RAYALAKHALAHTSNMLWLSDFPPWLLSLEEEQTR
         ++ALA  A+    N+ W +DFP WL+ L  ++ R
Subjt:  RAYALAKHALAHTSNMLWLSDFPPWLLSLEEEQTR

TrEMBL top hitse value%identityAlignment
A0A2N9H4E7 Uncharacterized protein2.3e-2629.24Show/hide
Query:  EDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYK-LAMLSSRSGGESSR-NVMKVWWQSLWNSGLPTKIKLFIWKAYHECLPTNYCLWKRKILGRPT
        EDV+ I +IPIS     D+ +W  + +G Y+V S Y+ LA       GESS  NV +  W+SLW+  +P  IK+F W+  H  LPT   L KRKI+  P 
Subjt:  EDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYK-LAMLSSRSGGESSR-NVMKVWWQSLWNSGLPTKIKLFIWKAYHECLPTNYCLWKRKILGRPT

Query:  CPMCNSEIETIDHALCGCIRARSICDCTFTRIDDQITETTQKKSSDGSISIQLKDH-----------------------ILNGKKSTVRVYTDAA--VIP
        CP C  + ET++HAL  C   RS     +   +  ITE  Q +  D ++   L DH                       +  G K+T +V   AA   + 
Subjt:  CPMCNSEIETIDHALCGCIRARSICDCTFTRIDDQITETTQKKSSDGSISIQLKDH-----------------------ILNGKKSTVRVYTDAA--VIP

Query:  NRSGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYI
        +    G GV I     +    +   +    + LAAE+ A++  L+L       +  V  DS++ I+ +  +    + + + +T  ++L    +      I
Subjt:  NRSGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYI

Query:  PRNRNLRAYALAKHALAHTSNMLWLSDFPPWLL-SLEEEQTR
        PR  N+ A+ LAK AL+     +W+ D P ++L +++ + TR
Subjt:  PRNRNLRAYALAKHALAHTSNMLWLSDFPPWLL-SLEEEQTR

A0A6J1DX30 uncharacterized protein LOC1110248745.5e-3630.57Show/hide
Query:  WDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKVWWQSLWNSGLPTKIKLFIWKAYHECLPTNYCL
        WD++ +      ED  LI ++PISS N+ D W+WHY K GNYSV+SGYKL M    +   +S N     W S+W   +PTKIK+FIW++ HE +PT   L
Subjt:  WDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKVWWQSLWNSGLPTKIKLFIWKAYHECLPTNYCL

Query:  WKRKILGRPTCPMCNSEIETIDHALCGCIRARSI---------C-----DCTFTRIDDQITETTQKKSSD-----GSISIQLKDHILNGKK---------
          R I   P C +C    E+I HA   C RAR I         C     + +F  +   +TE  + K  +     G      ++ +++GK+         
Subjt:  WKRKILGRPTCPMCNSEIETIDHALCGCIRARSI---------C-----DCTFTRIDDQITETTQKKSSD-----GSISIQLKDHILNGKK---------

Query:  -------------------------------------STVRVYTDAAVIPNRSGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRL
                                              ++++ TDAA     + T +G  I      L  A  +     L+PL AE++ IL+ L+     
Subjt:  -------------------------------------STVRVYTDAAVIPNRSGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRL

Query:  QYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALAKHALAHTS-NMLWLSDFPPWLLSL
         +   +V SDS+ AI++I  E+ T  D  +W+  IQ L   F  ISF +  R  N  A+ LAK  +   S    WL +FP WLL L
Subjt:  QYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALAKHALAHTS-NMLWLSDFPPWLLSL

A0A803PAK3 Uncharacterized protein4.1e-3128.35Show/hide
Query:  RWDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKVWWQSLWNSGLPTKIKLFIWKAYHECLPTNYC
        +W+   L       DV LI +IP++ I   D  +WH+   G YSVKSGY LA         SS N  + WW+  W   LP+KI++F+W+A H+CLP    
Subjt:  RWDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKVWWQSLWNSGLPTKIKLFIWKAYHECLPTNYC

Query:  LWKRKILGRPTCPMCNSEIETIDHALCGCIRARSICDCTFTRIDDQITETTQKKSSDGSISIQLKDHILNGKKSTVRVYTDAAVIPNRSGTGYGVAIVGE
        L  R I     C +CN   ETI HAL  C R +   D     +  +   T+   ++  + ++      LN     +++ TDAA+    + +G+G  +   
Subjt:  LWKRKILGRPTCPMCNSEIETIDHALCGCIRARSICDCTFTRIDDQITETTQKKSSDGSISIQLKDHILNGKKSTVRVYTDAAVIPNRSGTGYGVAIVGE

Query:  GNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALAKH
           +  AM         P   E  A++ AL+ I+ LQ     + ++S++ ++ +    +  +D    + +I  L   F      ++ R+ N  A+ LA++
Subjt:  GNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALAKH

Query:  ALAHTSNMLWLSDFPPWLLSL
        AL+  SN  W+ + PP L+ +
Subjt:  ALAHTSNMLWLSDFPPWLLSL

A0A803PC16 Uncharacterized protein7.0e-3129.28Show/hide
Query:  RWDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKVWWQSLWNSGLPTKIKLFIWKAYHECLPTNYC
        +W+   L       DV LI +IP++ +   D  +WH+   G YSVKSGY LA         SS N  + WW+  W   LP+KI++F+W+A H+CLP    
Subjt:  RWDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKVWWQSLWNSGLPTKIKLFIWKAYHECLPTNYC

Query:  LWKRKILGRPTCPMCNSEIETIDHALCGCIRARSICDCTFTRIDDQITETTQKKSSDGSISIQLKDHILNGKKSTVRVYTDAAVIPNRSGTGYGVAIVGE
        L  R I     C +CN   ETI HAL  C R +     +  R+ +    T   K SD           LN     +++ TDAA+    + +G+G  +   
Subjt:  LWKRKILGRPTCPMCNSEIETIDHALCGCIRARSICDCTFTRIDDQITETTQKKSSDGSISIQLKDHILNGKKSTVRVYTDAAVIPNRSGTGYGVAIVGE

Query:  GNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALAKH
           +  AM         P   E  A++ AL+ I+ LQ     + +DS++ ++ +    +  +D    + +I  L   F      ++ R+ N  A+ LA++
Subjt:  GNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALAKH

Query:  ALAHTSNMLWLSDFPPWLLSL
        AL+  SN  W+ + PP L+ +
Subjt:  ALAHTSNMLWLSDFPPWLLSL

M5VP36 Uncharacterized protein (Fragment)1.4e-2627.35Show/hide
Query:  WDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAM-----LSSRSGGESSRNVMKVWWQSLWNSGLPTKIKLFIWKAYHECLP
        W++  L     E DV+ I +IP+S     DRW+WHY+ NG YSVKSGY+L +      S   G  S   V   +W+ +W+  +P KI  F W+A    LP
Subjt:  WDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAM-----LSSRSGGESSRNVMKVWWQSLWNSGLPTKIKLFIWKAYHECLP

Query:  TNYCLWKRKILGRPTCPMCNSEIETIDHALCGCIRARSI----------CDCTFTRIDDQITETTQKKSS----------DGSISIQ----LKDHILNGK
            L KRKI+   +CP+CN   E++ HAL  C  A+ +              F    D     T   SS          +G    Q     + H L G+
Subjt:  TNYCLWKRKILGRPTCPMCNSEIETIDHALCGCIRARSI----------CDCTFTRIDDQITETTQKKSS----------DGSISIQ----LKDHILNGK

Query:  KSTV-----------------------RVYTDAAVIPNRSGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSIT
          ++                       ++  D A IP     G G  +  +   +  AM +      +   AE+ A L  ++  +   +    + SDS  
Subjt:  KSTV-----------------------RVYTDAAVIPNRSGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSIT

Query:  AIRMITK-EMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALAKHALAHTSNMLWLSDFPPWLLSL
        A+  + K E ++     H I  I+   + F+D+   + PR  N  A+ LAKHAL   + + W+ + P WL S+
Subjt:  AIRMITK-EMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALAKHALAHTSNMLWLSDFPPWLLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein1.4e-1230.88Show/hide
Query:  WDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKV--------WWQSLWNSGLPTKIKLFIWKAYHE
        WD SK+ + V + D   I+ I ++     D+ +W+Y+  G Y+V+SGY L         + S N+  +            +WN  +  K+K F+W+A  +
Subjt:  WDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKV--------WWQSLWNSGLPTKIKLFIWKAYHE

Query:  CLPTNYCLWKRKILGRPTCPMCNSEIETIDHALCGC
         L T   L  R +   P+CP C+ E E+I+HAL  C
Subjt:  CLPTNYCLWKRKILGRPTCPMCNSEIETIDHALCGC

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.9e-0540Show/hide
Query:  WWQSLWNSGLPTKIKLFIWKAYHECLPTNYCLWKRKILGRPTCPMCNSEIETIDHALCGC
        W   +W+  +  KIKL IWKA +  LP    L  R I   P C  C  + ETI H L  C
Subjt:  WWQSLWNSGLPTKIKLFIWKAYHECLPTNYCLWKRKILGRPTCPMCNSEIETIDHALCGC

AT4G09490.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.2e-0430.71Show/hide
Query:  VRVYTDAAVIPNRSGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLC
        V ++TDAA        G+G  I     +     +        PL AE  A+  AL+  Q +   +  + SDS   I  IT E   +T+    I  I +L 
Subjt:  VRVYTDAAVIPNRSGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLC

Query:  RVFKDISFIYIPRNRNLRAYALAKHAL
          F D+SF ++PR+ N  A  LAK +L
Subjt:  RVFKDISFIYIPRNRNLRAYALAKHAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATTCTTCTCCGCCCGCAACTTAAGAAGTTAGCTTTGCCAACACTAACATTAGGATGTCTCCTTCATTCTATGTTGACTCCAACCCCGAGCTGGCTTTTGGAGAA
GTCCATTACCACCACACTCATGGTACAACTGGTTTCAACATCGATCGAAGAAGGAGAATGGAGAAGAGTGAGAGGCGTGCGGCTGAAAACGAAGGGAGAAGAGGCGTGCG
ACTGCCAGCTGGAACGAAGGGAGAAGGTGATAGGCGAAGGCGTGCGGTTGCCGGCTGGAACAAAGGGAGATGAAGATAGGTCAGGCGTGCGGCTGCCGACTGGAACGAAG
GGAGAAGGAGAGGCGTGCGGCTGTAATGAAGGGAGAAGAGGCGTGCGGCAGTCAGCTTACCATATGGCAGTGAGGATTGAAGCAAAAGACCAAGTCTCAAGATCAGATGA
AGGTTTAAGTTCAAATTTATGGAATAAGCTGTGGAAGCTAAAAACAATCAAAGAAGGAATCAACAACTCACCCATGTGCTATGGAGATGGATCATCCTCAGGAACCTATG
GAGCTACTGGAATACGTCACCGAGGTGATAAATCGTTGAATCACTCTAGCGAGGAGCTAACGAAAACGAGGAATGTGTTGGAAGAAATCGAAGATCTTGCGAGAGATGAA
GTCGAAATGACTTTTGCATGGTGCCCAAGTTACAGGCTTAGAGGGCGAGGATGGGGGCTGACTTGTGGTGAGAATAAGGCAAGCAGAAGCAGAACAAGGTGGGATATATC
AAAGCTAAGGGAACAAGTACGGGAAGAGGATGTGCGATTAATTAATACTATCCCCATTAGTTCTATAAATGTCGGAGATAGGTGGGTTTGGCATTACTCTAAAAATGGAA
ACTACTCTGTCAAGAGTGGTTATAAATTAGCTATGCTATCTTCAAGATCTGGTGGTGAGTCAAGTAGGAATGTCATGAAAGTTTGGTGGCAATCGTTATGGAATTCCGGG
TTGCCGACAAAGATTAAGTTATTCATTTGGAAAGCCTATCATGAGTGCTTACCAACTAATTACTGCTTGTGGAAAAGGAAAATATTAGGCCGGCCTACTTGCCCCATGTG
CAATTCCGAGATAGAGACAATTGATCATGCCTTATGCGGCTGTATTCGGGCAAGGTCCATTTGTGATTGTACATTCACCCGGATTGATGATCAAATAACGGAAACAACAC
AGAAGAAAAGTTCAGATGGAAGTATCAGCATTCAATTAAAAGATCACATCCTTAATGGTAAGAAGAGTACCGTCCGGGTTTATACCGATGCGGCGGTGATTCCGAATCGT
AGTGGCACAGGATATGGAGTTGCTATAGTGGGGGAGGGAAATGTCCTTCGTTGTGCAATGGAGATGGTCGAAGATGTGGATCTTAATCCACTAGCAGCAGAGGTACAAGC
CATTCTTCAAGCACTTCGTCTCATACAACGATTGCAATATCAAGAAGCCCAAGTGTGTTCGGACTCCATCACTGCCATTCGGATGATTACTAAGGAGATGGATACGAACA
CAGATGTTGCTCATTGGATTACCAGCATTCAGGATCTGTGTAGAGTTTTTAAGGATATTTCTTTCATTTACATTCCCAGGAATAGGAATTTGAGAGCATATGCTTTGGCC
AAACATGCTTTGGCACATACAAGTAACATGTTGTGGCTATCAGATTTTCCACCATGGTTACTTTCTTTGGAGGAAGAACAGACTAGAGGGTTGGGCCAACTTGGCTCGAC
CCATATGGTCGGCCTCGGCGCTGAGCTCTTCCGCCTCCGTTCGGTCCCTGGTATCCTCGGTCGCCCCGGTTCAGCTCAGTTCAACCCCAAATCGCCTCCGAACGCCTCGA
AACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCATTCTTCTCCGCCCGCAACTTAAGAAGTTAGCTTTGCCAACACTAACATTAGGATGTCTCCTTCATTCTATGTTGACTCCAACCCCGAGCTGGCTTTTGGAGAA
GTCCATTACCACCACACTCATGGTACAACTGGTTTCAACATCGATCGAAGAAGGAGAATGGAGAAGAGTGAGAGGCGTGCGGCTGAAAACGAAGGGAGAAGAGGCGTGCG
ACTGCCAGCTGGAACGAAGGGAGAAGGTGATAGGCGAAGGCGTGCGGTTGCCGGCTGGAACAAAGGGAGATGAAGATAGGTCAGGCGTGCGGCTGCCGACTGGAACGAAG
GGAGAAGGAGAGGCGTGCGGCTGTAATGAAGGGAGAAGAGGCGTGCGGCAGTCAGCTTACCATATGGCAGTGAGGATTGAAGCAAAAGACCAAGTCTCAAGATCAGATGA
AGGTTTAAGTTCAAATTTATGGAATAAGCTGTGGAAGCTAAAAACAATCAAAGAAGGAATCAACAACTCACCCATGTGCTATGGAGATGGATCATCCTCAGGAACCTATG
GAGCTACTGGAATACGTCACCGAGGTGATAAATCGTTGAATCACTCTAGCGAGGAGCTAACGAAAACGAGGAATGTGTTGGAAGAAATCGAAGATCTTGCGAGAGATGAA
GTCGAAATGACTTTTGCATGGTGCCCAAGTTACAGGCTTAGAGGGCGAGGATGGGGGCTGACTTGTGGTGAGAATAAGGCAAGCAGAAGCAGAACAAGGTGGGATATATC
AAAGCTAAGGGAACAAGTACGGGAAGAGGATGTGCGATTAATTAATACTATCCCCATTAGTTCTATAAATGTCGGAGATAGGTGGGTTTGGCATTACTCTAAAAATGGAA
ACTACTCTGTCAAGAGTGGTTATAAATTAGCTATGCTATCTTCAAGATCTGGTGGTGAGTCAAGTAGGAATGTCATGAAAGTTTGGTGGCAATCGTTATGGAATTCCGGG
TTGCCGACAAAGATTAAGTTATTCATTTGGAAAGCCTATCATGAGTGCTTACCAACTAATTACTGCTTGTGGAAAAGGAAAATATTAGGCCGGCCTACTTGCCCCATGTG
CAATTCCGAGATAGAGACAATTGATCATGCCTTATGCGGCTGTATTCGGGCAAGGTCCATTTGTGATTGTACATTCACCCGGATTGATGATCAAATAACGGAAACAACAC
AGAAGAAAAGTTCAGATGGAAGTATCAGCATTCAATTAAAAGATCACATCCTTAATGGTAAGAAGAGTACCGTCCGGGTTTATACCGATGCGGCGGTGATTCCGAATCGT
AGTGGCACAGGATATGGAGTTGCTATAGTGGGGGAGGGAAATGTCCTTCGTTGTGCAATGGAGATGGTCGAAGATGTGGATCTTAATCCACTAGCAGCAGAGGTACAAGC
CATTCTTCAAGCACTTCGTCTCATACAACGATTGCAATATCAAGAAGCCCAAGTGTGTTCGGACTCCATCACTGCCATTCGGATGATTACTAAGGAGATGGATACGAACA
CAGATGTTGCTCATTGGATTACCAGCATTCAGGATCTGTGTAGAGTTTTTAAGGATATTTCTTTCATTTACATTCCCAGGAATAGGAATTTGAGAGCATATGCTTTGGCC
AAACATGCTTTGGCACATACAAGTAACATGTTGTGGCTATCAGATTTTCCACCATGGTTACTTTCTTTGGAGGAAGAACAGACTAGAGGGTTGGGCCAACTTGGCTCGAC
CCATATGGTCGGCCTCGGCGCTGAGCTCTTCCGCCTCCGTTCGGTCCCTGGTATCCTCGGTCGCCCCGGTTCAGCTCAGTTCAACCCCAAATCGCCTCCGAACGCCTCGA
AACCCTAG
Protein sequenceShow/hide protein sequence
MSILLRPQLKKLALPTLTLGCLLHSMLTPTPSWLLEKSITTTLMVQLVSTSIEEGEWRRVRGVRLKTKGEEACDCQLERREKVIGEGVRLPAGTKGDEDRSGVRLPTGTK
GEGEACGCNEGRRGVRQSAYHMAVRIEAKDQVSRSDEGLSSNLWNKLWKLKTIKEGINNSPMCYGDGSSSGTYGATGIRHRGDKSLNHSSEELTKTRNVLEEIEDLARDE
VEMTFAWCPSYRLRGRGWGLTCGENKASRSRTRWDISKLREQVREEDVRLINTIPISSINVGDRWVWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNVMKVWWQSLWNSG
LPTKIKLFIWKAYHECLPTNYCLWKRKILGRPTCPMCNSEIETIDHALCGCIRARSICDCTFTRIDDQITETTQKKSSDGSISIQLKDHILNGKKSTVRVYTDAAVIPNR
SGTGYGVAIVGEGNVLRCAMEMVEDVDLNPLAAEVQAILQALRLIQRLQYQEAQVCSDSITAIRMITKEMDTNTDVAHWITSIQDLCRVFKDISFIYIPRNRNLRAYALA
KHALAHTSNMLWLSDFPPWLLSLEEEQTRGLGQLGSTHMVGLGAELFRLRSVPGILGRPGSAQFNPKSPPNASKP