; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031402 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031402
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold11:39220720..39225051
RNA-Seq ExpressionSpg031402
SyntenySpg031402
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]1.7e-1637.7Show/hide
Query:  DDEKGYSIELNPEEIKELDNQ-MEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPWFFDKFLIVLEEPTID
        DD+ G  IE     ++E   Q +   L+GK ++N++I+ +A K+ ++  W+T+N+   E++G N F F+F+N  D+  IL  GPW FDK L+VL E +  
Subjt:  DDEKGYSIELNPEEIKELDNQ-MEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPWFFDKFLIVLEEPTID

Query:  RRIPEMEFKEVAFWIRLMNLPI
         ++ +++F+ V FWI+L NLP+
Subjt:  RRIPEMEFKEVAFWIRLMNLPI

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]7.7e-2540.14Show/hide
Query:  DMEEMIDEWRKVNLRDDEKGYSIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPWF
        D E ++ +W+K  L  +E   +++++ + +K  +  + + LVGKLL+ RIISA  +   L  AWK  ++   E +GKN FLF F  + D + ++ +GPWF
Subjt:  DMEEMIDEWRKVNLRDDEKGYSIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPWF

Query:  FDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPIGYRSKT
        FDK LIVL++P   + I E+EF  VAFWI L +LP+ + +KT
Subjt:  FDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPIGYRSKT

XP_024033132.1 uncharacterized protein LOC112095437 [Citrus clementina]1.7e-1637.96Show/hide
Query:  DMEEMIDEWRKVNLRDDEKGYSIELNPEEIKELDNQ-MEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPW
        + EE+I + + + L  +E    I     ++KE  ++ +  CLVGK+L  R ++ + +K AL  AW+T + FK E +G N F+FKF ++ DK  + N GPW
Subjt:  DMEEMIDEWRKVNLRDDEKGYSIELNPEEIKELDNQ-MEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPW

Query:  FFDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPI
         FD+ L+VL+EP     I +  F  V+FWIR+ N+P+
Subjt:  FFDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPI

XP_024033488.1 uncharacterized protein LOC112095611 [Citrus clementina]4.5e-1737.5Show/hide
Query:  DMEEMIDEWRKVNLRDDEKGYSIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPWF
        D EE+I + + ++L  + +G  I L     ++ +  M  CLVGK+L NR +  +  K AL   WKT  + K E +G N F+F+F  + DK  +L  GPW 
Subjt:  DMEEMIDEWRKVNLRDDEKGYSIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPWF

Query:  FDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPI
        FDK LIV+ EP     + +  F  V+FW++++N+PI
Subjt:  FDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPI

XP_024036844.1 uncharacterized protein LOC112096879 [Citrus clementina]2.9e-1633.33Show/hide
Query:  DMEEMIDEWRKVNLRDDEKG-YSIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPW
        D EE+I + + + +R+++K   S+ +N +E  +    +  CL+GK+L +R ++ + +K AL   W+T  + K + +G N F+FKF  + DK  +L+ GPW
Subjt:  DMEEMIDEWRKVNLRDDEKG-YSIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPW

Query:  FFDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPIGYRSK----TPESPKGKPDGDEKTENGD
         FD+ LIVL EP     + +  F +V FW+++ N+P+    +      E   GK +  E  ENGD
Subjt:  FFDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPIGYRSK----TPESPKGKPDGDEKTENGD

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)3.2e-1634.45Show/hide
Query:  DMEEMIDEWRKVNLRDDEKG-----YSIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILN
        D EE+I   R + L D+E G       +++N E+I      +  CLVGK+L  R +S + +K A+   W+T  + K E +G+N F+FKF +++DK  I+ 
Subjt:  DMEEMIDEWRKVNLRDDEKG-----YSIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILN

Query:  SGPWFFDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPIGYRSKTPESPKGKPDGDEKTENGDTGKKREEEESSSRHAITEKTEKIKATSINSDQMEE
         GPW FD+ LI L EPT    I + +F  V+FW+++ ++PI   SK   +  GK  G  K E  +T    E      R  I+    K     I  +Q EE
Subjt:  SGPWFFDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPIGYRSKTPESPKGKPDGDEKTENGDTGKKREEEESSSRHAITEKTEKIKATSINSDQMEE

Query:  NCDEQNKRV
        + D+   RV
Subjt:  NCDEQNKRV

A0A5C7H9Y2 CCHC-type domain-containing protein8.3e-1737.7Show/hide
Query:  DDEKGYSIELNPEEIKELDNQ-MEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPWFFDKFLIVLEEPTID
        DD+ G  IE     ++E   Q +   L+GK ++N++I+ +A K+ ++  W+T+N+   E++G N F F+F+N  D+  IL  GPW FDK L+VL E +  
Subjt:  DDEKGYSIELNPEEIKELDNQ-MEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPWFFDKFLIVLEEPTID

Query:  RRIPEMEFKEVAFWIRLMNLPI
         ++ +++F+ V FWI+L NLP+
Subjt:  RRIPEMEFKEVAFWIRLMNLPI

A0A6J1BSZ1 uncharacterized protein LOC1110054814.1e-1631.54Show/hide
Query:  MIDEWRKVNLRDDEKGYSIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNK-FKAEVVGKNYFLFKFENQMDKDWILNSGPWFFDK
        +++EW+   L  +E   +++++   ++     +E  L+ KLLS R IS   +KN L  AWK   K F  +++G N FLF F    D++ IL  GPW FD+
Subjt:  MIDEWRKVNLRDDEKGYSIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNK-FKAEVVGKNYFLFKFENQMDKDWILNSGPWFFDK

Query:  FLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPIGYRSKTPESPKGKPDG
         LI+++ P    +  +M+F+ V+ W+   +L +   +KT  +  G   G
Subjt:  FLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPIGYRSKTPESPKGKPDG

A0A6J1DU55 uncharacterized protein LOC1110231353.7e-2540.14Show/hide
Query:  DMEEMIDEWRKVNLRDDEKGYSIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPWF
        D E ++ +W+K  L  +E   +++++ + +K  +  + + LVGKLL+ RIISA  +   L  AWK  ++   E +GKN FLF F  + D + ++ +GPWF
Subjt:  DMEEMIDEWRKVNLRDDEKGYSIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPWF

Query:  FDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPIGYRSKT
        FDK LIVL++P   + I E+EF  VAFWI L +LP+ + +KT
Subjt:  FDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPIGYRSKT

A0A803L1E7 Uncharacterized protein8.3e-1734.75Show/hide
Query:  EEMIDEWRKVNLRDDEK----GYSIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGP
        EE++++W+K+ L D+E+    G  +E   ++ K+   Q++  LVGKL + +  + +A+K  LT  W+ + KF   VV  N F+F+F    DK+ ++   P
Subjt:  EEMIDEWRKVNLRDDEK----GYSIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGP

Query:  WFFDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPIGYR
        WFFD+ L++L+E   D +  E+ FK    W+RLM++P   R
Subjt:  WFFDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPIGYR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding8.0e-0434.72Show/hide
Query:  EVVG------KNYFLFKFENQMDKDWILNSGPWFFDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPIGY
        EVVG      K  FLF+ E  M    IL  GPW F+ ++ V++  T  +   + EFK + FWI++  +P+ +
Subjt:  EVVG------KNYFLFKFENQMDKDWILNSGPWFFDKFLIVLEEPTIDRRIPEMEFKEVAFWIRLMNLPIGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTCAACACAACCCACTCCGTGTATTCCCGGTTCTGGAAGGCGTACGGAAACTTAATTGTGATGCTTCATGGTGCAAACAAAGGAAGTTGGGAGACATTGGTTG
GATTCTCCGGTATTGGGACGACTCTCCATTGAATTCAGATTGGTCACTTTTCTACTTGGGATTTACCTTGGGAAGTGATCATCCTCTGATTCAGGTGGAATTTAGCTTTG
AGGCTGGGATAACGGTCACGAAGGAAAGGCATTGTCTCAAGGAACCAGACATGGAAGAGATGATTGATGAATGGAGAAAGGTCAATCTCAGGGATGATGAAAAAGGTTAC
TCGATAGAACTCAACCCAGAAGAAATTAAAGAGTTAGACAACCAAATGGAATTTTGCCTGGTTGGGAAACTTCTGTCCAACAGGATAATATCAGCACAAGCAATAAAGAA
TGCTCTTACTGGGGCATGGAAGACAAGGAACAAATTTAAGGCTGAAGTAGTGGGGAAAAACTATTTTCTGTTTAAATTTGAAAACCAAATGGATAAAGACTGGATCTTGA
ATAGTGGTCCTTGGTTTTTCGACAAGTTCTTGATAGTCCTCGAAGAACCAACGATAGATAGAAGAATCCCCGAAATGGAGTTTAAAGAGGTAGCTTTCTGGATACGGCTT
ATGAATCTCCCAATCGGTTATCGCAGCAAGACACCAGAGTCGCCCAAAGGAAAACCTGATGGAGATGAGAAAACAGAAAATGGCGACACAGGAAAAAAGAGAGAAGAAGA
GGAATCAAGTTCTAGGCATGCTATTACGGAAAAGACAGAAAAAATAAAAGCGACAAGTATCAACTCCGACCAGATGGAGGAAAATTGTGATGAACAGAACAAAAGAGTAT
GGATTAATCTAAATATTAGTGAGAATTCAGAAGCAGAGTCAAAAGAAAATGAGAAGGAGGCAATGGAGGTTAATATGGCTGGTGATGAAGAAACTGAATTTCCAAAAAAA
AAAGACAGAAAGACACCAAGGAGGAAATTAAGTTGGAAGAGGCGATCCAAGAAGGTCCAGGGGATGGAACCTAAGGAAATCAGATTGACTCCACAAAAAAGGAAGTGCTT
GAGTACACTCCAAAATGATAAGAAACGAACTAAAATTGGGGGAAAGGATGATATGGAAGTAAATGGGGGTGGCTTAATCTTGGCAGCGGTTGTTGATCAGCCCTGCCTAG
GATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTTCAACACAACCCACTCCGTGTATTCCCGGTTCTGGAAGGCGTACGGAAACTTAATTGTGATGCTTCATGGTGCAAACAAAGGAAGTTGGGAGACATTGGTTG
GATTCTCCGGTATTGGGACGACTCTCCATTGAATTCAGATTGGTCACTTTTCTACTTGGGATTTACCTTGGGAAGTGATCATCCTCTGATTCAGGTGGAATTTAGCTTTG
AGGCTGGGATAACGGTCACGAAGGAAAGGCATTGTCTCAAGGAACCAGACATGGAAGAGATGATTGATGAATGGAGAAAGGTCAATCTCAGGGATGATGAAAAAGGTTAC
TCGATAGAACTCAACCCAGAAGAAATTAAAGAGTTAGACAACCAAATGGAATTTTGCCTGGTTGGGAAACTTCTGTCCAACAGGATAATATCAGCACAAGCAATAAAGAA
TGCTCTTACTGGGGCATGGAAGACAAGGAACAAATTTAAGGCTGAAGTAGTGGGGAAAAACTATTTTCTGTTTAAATTTGAAAACCAAATGGATAAAGACTGGATCTTGA
ATAGTGGTCCTTGGTTTTTCGACAAGTTCTTGATAGTCCTCGAAGAACCAACGATAGATAGAAGAATCCCCGAAATGGAGTTTAAAGAGGTAGCTTTCTGGATACGGCTT
ATGAATCTCCCAATCGGTTATCGCAGCAAGACACCAGAGTCGCCCAAAGGAAAACCTGATGGAGATGAGAAAACAGAAAATGGCGACACAGGAAAAAAGAGAGAAGAAGA
GGAATCAAGTTCTAGGCATGCTATTACGGAAAAGACAGAAAAAATAAAAGCGACAAGTATCAACTCCGACCAGATGGAGGAAAATTGTGATGAACAGAACAAAAGAGTAT
GGATTAATCTAAATATTAGTGAGAATTCAGAAGCAGAGTCAAAAGAAAATGAGAAGGAGGCAATGGAGGTTAATATGGCTGGTGATGAAGAAACTGAATTTCCAAAAAAA
AAAGACAGAAAGACACCAAGGAGGAAATTAAGTTGGAAGAGGCGATCCAAGAAGGTCCAGGGGATGGAACCTAAGGAAATCAGATTGACTCCACAAAAAAGGAAGTGCTT
GAGTACACTCCAAAATGATAAGAAACGAACTAAAATTGGGGGAAAGGATGATATGGAAGTAAATGGGGGTGGCTTAATCTTGGCAGCGGTTGTTGATCAGCCCTGCCTAG
GATTATGA
Protein sequenceShow/hide protein sequence
MKLQHNPLRVFPVLEGVRKLNCDASWCKQRKLGDIGWILRYWDDSPLNSDWSLFYLGFTLGSDHPLIQVEFSFEAGITVTKERHCLKEPDMEEMIDEWRKVNLRDDEKGY
SIELNPEEIKELDNQMEFCLVGKLLSNRIISAQAIKNALTGAWKTRNKFKAEVVGKNYFLFKFENQMDKDWILNSGPWFFDKFLIVLEEPTIDRRIPEMEFKEVAFWIRL
MNLPIGYRSKTPESPKGKPDGDEKTENGDTGKKREEEESSSRHAITEKTEKIKATSINSDQMEENCDEQNKRVWINLNISENSEAESKENEKEAMEVNMAGDEETEFPKK
KDRKTPRRKLSWKRRSKKVQGMEPKEIRLTPQKRKCLSTLQNDKKRTKIGGKDDMEVNGGGLILAAVVDQPCLGL