CuGenDBv2

Gene ID	Spg031494
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Genome location	scaffold11:41404147..41406492
RNA-Seq Expression	Spg031494
Synteny	Spg031494
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR002156 - Ribonuclease H domain IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR044730 - Ribonuclease H-like domain, plant type

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6597301.1 hypothetical protein SDJN03_10481, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-101

83.61

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Query:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT
        MNNE P IRVFGQ SISSSF S SSNPFKSSNE SQSKS KKSS LSLS+FLDRKLPE+ V QRTVKGKSTPFSSLQGPRD+NSS+N PIGIH   DSQT
Subjt:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT

Query:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA
        ESAISKVLFE+FKRSEPNQS+  V   ASEADIFS DDMLESRKRK  SEGF ST PCESQARKKNVVVLGGDPKPE+K +E VH+IRNKKP+PLYNHYA
Subjt:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA

Query:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
         G GWWDC+MEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Subjt:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH

TYK17398.1 uncharacterized protein E5676_scaffold434G002580 [Cucumis melo var. makuwa]

4.6e-101

82.35

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Query:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT
        MNNE PPIRVFGQ SISSSFLSRSSNPFKSSN+ SQSK +KK+S+LSLSDFLDRKLPE SVPQRTVKGKSTPFSSLQGPR+SN   N PI I CG DSQT
Subjt:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT

Query:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA
        ESAISKVLFEQFKRSEP+Q E LVSGSASE DIF+ DD+LESRKRK S+EGFIST PCESQ RK NVVV+GGDP+P+QKG + +   RNKKP+PLYNHYA
Subjt:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA

Query:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
         GSGWWD NMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Subjt:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH

XP_008438377.1 PREDICTED: uncharacterized protein LOC103483493 [Cucumis melo]

2.0e-101

82.77

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Query:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT
        MNNE PPIRVFGQ SISSSFLSRSSNPFKSSN+ SQSK +KK+S+LSLSDFLDRKLPE SVPQRTVKGKSTPFSSLQGPR+SN   N PI I CG DSQT
Subjt:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT

Query:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA
        ESAISKVLFEQFKRSEP+Q E LVSGSASE DIF+ DD+LESRKRK S+EGFIST PCESQ RK NVVV+GGDP+PEQKG + +   RNKKP+PLYNHYA
Subjt:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA

Query:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
         GSGWWD NMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Subjt:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH

XP_023522097.1 uncharacterized protein LOC111785973 [Cucurbita pepo subsp. pepo]

4.4e-104

84.45

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Query:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT
        MNNE PPIRVFGQ SISSSF S SSNPFKSSNE S+SKS+KKSS LSLS+FLDRKLPE+ VPQRTVKGKSTPFSSLQGPRD+NSS+N PIGIH   DSQT
Subjt:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT

Query:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA
        ESAISKVLFE+FKRSEPNQSE  V   ASEADIFS DDMLESRKRK  SEGF ST PCESQARKKNVVVLGGDPKPE+K +E VH+IRNKKP+PLYNHYA
Subjt:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA

Query:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
         G GWWDC+MEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Subjt:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH

XP_038899723.1 uncharacterized protein LOC120086964 [Benincasa hispida]

9.8e-104

84.03

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Query:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT
        MNNE PPIRVFGQ SISSSFLSRSSNPF  +NE SQSK SKKSS+LSLSDFLDRKLPE S+PQRTVKGKSTPFSSLQGPR+SN   NGPIGI CG DSQT
Subjt:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT

Query:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA
        ES+ISKVLFEQFKRSEPNQ E LVSGSASEADIF+ DD+LESRKRK SSEGF+ST PCESQ RKKNVVV+GGDPKP+QKGKE +H +RNK+ + LYNHYA
Subjt:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA

Query:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
         GSGWWDCN EGVDSEEVGLGEVWEGVGSTTLGGIEWH
Subjt:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AWV7 uncharacterized protein LOC103483493

9.9e-102

82.77

Show/hide

Query:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT
        MNNE PPIRVFGQ SISSSFLSRSSNPFKSSN+ SQSK +KK+S+LSLSDFLDRKLPE SVPQRTVKGKSTPFSSLQGPR+SN   N PI I CG DSQT
Subjt:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT

Query:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA
        ESAISKVLFEQFKRSEP+Q E LVSGSASE DIF+ DD+LESRKRK S+EGFIST PCESQ RK NVVV+GGDP+PEQKG + +   RNKKP+PLYNHYA
Subjt:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA

Query:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
         GSGWWD NMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Subjt:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH

A0A5A7U046 Uncharacterized protein

9.9e-102

82.77

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Query:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT
        MNNE PPIRVFGQ SISSSFLSRSSNPFKSSN+ SQSK +KK+S+LSLSDFLDRKLPE SVPQRTVKGKSTPFSSLQGPR+SN   N PI I CG DSQT
Subjt:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT

Query:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA
        ESAISKVLFEQFKRSEP+Q E LVSGSASE DIF+ DD+LESRKRK S+EGFIST PCESQ RK NVVV+GGDP+PEQKG + +   RNKKP+PLYNHYA
Subjt:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA

Query:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
         GSGWWD NMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Subjt:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH

A0A5D3D1M8 Uncharacterized protein

2.2e-101

82.35

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Query:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT
        MNNE PPIRVFGQ SISSSFLSRSSNPFKSSN+ SQSK +KK+S+LSLSDFLDRKLPE SVPQRTVKGKSTPFSSLQGPR+SN   N PI I CG DSQT
Subjt:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT

Query:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA
        ESAISKVLFEQFKRSEP+Q E LVSGSASE DIF+ DD+LESRKRK S+EGFIST PCESQ RK NVVV+GGDP+P+QKG + +   RNKKP+PLYNHYA
Subjt:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA

Query:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
         GSGWWD NMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Subjt:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH

A0A6J1FAE9 uncharacterized protein LOC111442284

2.4e-100

82.77

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Query:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT
        MNNE P IRVFGQ SISSSF S SSNPFKSSNE SQSKS KKSS LSLS+FLDRKLPE+ V QRTVKGKSTPFSSLQGPRD+NSS+N PIGIH   DSQT
Subjt:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT

Query:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA
        ESAISKVLFE+FKRSEPNQS+  V   ASEADIFS DDMLESRKRK  SEGF ST PCE QARKKNVVVLGGDPKPE+K +E VH+IRN KP+PLYNHYA
Subjt:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA

Query:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
         G GWWDC+MEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Subjt:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH

A0A6J1IKN5 uncharacterized protein LOC111474871

3.8e-101

82.35

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Query:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT
        MNNE PPIRVFGQ SISSSF S SSNPFKSSNE S+SKS+KKSS LSLS+FLDRKLPE+ V QRTVKGKSTPFSSLQGPRD+NSS+N P GIH   DSQT
Subjt:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT

Query:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA
        ESAISKVLFE+FKRSEPNQS+  V   AS ADIFS DDML+SRKRK  SEGF ST PCESQARKKNVVVLGGDPKPE+K +E VH+IRNKKP+PLYNHYA
Subjt:  ESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYA

Query:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH
         G GWWDC+MEGVDSEEVGLGEVWEGVGSTTLGGIEWH
Subjt:  GGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G13690.1 unknown protein

3.0e-26

36.94

Show/hide

Query:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT
        M    P IRVFGQ SI+SSFL+ SS P  +++E    K   +S       F      E   P  ++        SL   +      NG            
Subjt:  MNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIGIHCGADSQT

Query:  ESAISKVLFEQFKRSEPNQSECL------------VSGSASE-------------ADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGD--
        +  + K++ +QFK  E   SE +            V  +A+E              DI  RDD   S+KRK   EG       ES +R    V++ GD  
Subjt:  ESAISKVLFEQFKRSEPNQSECL------------VSGSASE-------------ADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGD--

Query:  --PKPEQKGKEGVHNIRNKKPRPLYNHYAGGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGI-EWH
           KP Q+ +E   N  +KK RP+YNHYA GSGWWDC+MEGVDSEEVG  EVWEGVGSTT G I +WH
Subjt:  --PKPEQKGKEGVHNIRNKKPRPLYNHYAGGSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGI-EWH

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTTGTCATGGGACCTACTGGTCAAATGATAGCAACGATGGAGATGATTGATCAAATATGTTTCACACCGCTTGCAGCAGAGAGATCCAAGCGATCCTGCATGGCCTT
AGATTGCTGCAATGTTTTGCAGCATATGAATGCTCATGTATTCTCCGACTCCTCCAATGCTATCTGCATGATAACAGGGGATCTTCAACCTTCTTCAGATGTGTATCATT
GGATTGTTCAAATCCAAGAAATGACTACACAGTTCTTTAGTTTAACTTTTTGTCATGTGCCTAGACATGGAAATAGGGAAGCAGATTTGTTAGCTAAAGATGCTTTAGCT
CAAACAAATTCTATGCTTTGTCCTTCCAAAATTTTCCAACATTTCAAGTTCGAGCAAATGAACAACGAGAGTCCTCCGATTAGGGTTTTCGGCCAGCTTTCGATTTCATC
GTCTTTCCTCTCCCGATCTTCAAATCCTTTCAAGAGTTCGAATGAAGGTTCGCAAAGCAAATCTTCGAAGAAGAGCTCGCGCTTGTCGCTCTCGGACTTCCTCGATCGGA
AACTGCCGGAAGCTTCCGTGCCACAGAGGACGGTGAAGGGGAAGTCCACGCCCTTCTCTTCATTGCAGGGTCCAAGGGATTCAAATAGTTCCATTAATGGACCAATTGGA
ATTCATTGTGGGGCAGATTCCCAGACAGAATCAGCTATTTCAAAGGTGCTTTTTGAACAGTTCAAGCGTTCTGAACCAAACCAAAGTGAATGTTTAGTTTCTGGCAGTGC
AAGTGAAGCAGATATCTTCAGTAGAGATGATATGCTAGAATCAAGGAAAAGAAAAACATCAAGTGAAGGCTTTATTTCCACCATCCCATGTGAGAGCCAAGCGAGGAAGA
AGAATGTGGTAGTTCTTGGAGGCGACCCAAAACCGGAGCAAAAGGGGAAGGAGGGGGTTCATAATATTAGAAACAAAAAACCAAGACCTCTCTATAATCACTATGCAGGT
GGCAGTGGCTGGTGGGACTGCAACATGGAGGGTGTTGATAGTGAAGAGGTTGGCCTTGGTGAAGTATGGGAAGGAGTTGGTTCTACCACACTTGGAGGAATAGAATGGCA
TTGA

mRNA sequence

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Protein sequence

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MVVMGPTGQMIATMEMIDQICFTPLAAERSKRSCMALDCCNVLQHMNAHVFSDSSNAICMITGDLQPSSDVYHWIVQIQEMTTQFFSLTFCHVPRHGNREADLLAKDALA
QTNSMLCPSKIFQHFKFEQMNNESPPIRVFGQLSISSSFLSRSSNPFKSSNEGSQSKSSKKSSRLSLSDFLDRKLPEASVPQRTVKGKSTPFSSLQGPRDSNSSINGPIG
IHCGADSQTESAISKVLFEQFKRSEPNQSECLVSGSASEADIFSRDDMLESRKRKTSSEGFISTIPCESQARKKNVVVLGGDPKPEQKGKEGVHNIRNKKPRPLYNHYAG
GSGWWDCNMEGVDSEEVGLGEVWEGVGSTTLGGIEWH

Spg031494 (gene) of Sponge gourd (cylindrica) v1 genome