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Spg031556 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031556
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein LITTLE ZIPPER 3-like
Genome locationscaffold11:42770722..42775513
RNA-Seq ExpressionSpg031556
SyntenySpg031556
Gene Ontology termsNA
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146904.1 protein LITTLE ZIPPER 2-like [Momordica charantia]8.0e-1877.92Show/hide
Query:  LIVLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQPSI
        L V  L RRMR  KEEAED   E  MEIKNLKL+MENQSIIEENERLRK+AFLLHKENQVLLSQ+QSFS QK QP I
Subjt:  LIVLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQPSI

XP_022924351.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]3.6e-1881.08Show/hide
Query:  VLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQPS
        V  L RRMRF KEEA     +  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ+FSKQK QPS
Subjt:  VLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQPS

XP_022980450.1 protein LITTLE ZIPPER 1-like [Cucurbita maxima]1.0e-1780.82Show/hide
Query:  VLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQP
        V  L RRMRF KEEA     +  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ+FSKQK QP
Subjt:  VLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQP

XP_023527864.1 protein LITTLE ZIPPER 2-like isoform X1 [Cucurbita pepo subsp. pepo]3.3e-2771.68Show/hide
Query:  PPQNVRLFSVDAHSLLSLVFSLPPSPPADSSSQAFESLIVLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLS
        PP+ VR FS++ H   S VF   PSP ADSS QAFESL    +FRRMRF KEEA     +  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLS
Subjt:  PPQNVRLFSVDAHSLLSLVFSLPPSPPADSSSQAFESLIVLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLS

Query:  QLQSFSKQKSQPS
        QLQ+FSKQK  PS
Subjt:  QLQSFSKQKSQPS

XP_023527865.1 protein LITTLE ZIPPER 1-like isoform X2 [Cucurbita pepo subsp. pepo]2.3e-1779.73Show/hide
Query:  VLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQPS
        V  L RRMRF KEEA     +  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ+FSKQK  PS
Subjt:  VLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQPS

TrEMBL top hitse value%identityAlignment
A0A6J1CZF0 protein LITTLE ZIPPER 2-like3.9e-1877.92Show/hide
Query:  LIVLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQPSI
        L V  L RRMR  KEEAED   E  MEIKNLKL+MENQSIIEENERLRK+AFLLHKENQVLLSQ+QSFS QK QP I
Subjt:  LIVLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQPSI

A0A6J1E9A8 protein LITTLE ZIPPER 1-like1.7e-1881.08Show/hide
Query:  VLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQPS
        V  L RRMRF KEEA     +  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ+FSKQK QPS
Subjt:  VLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQPS

A0A6J1F7Z1 protein LITTLE ZIPPER 3-like9.6e-1783.58Show/hide
Query:  LFRRMRFAKEEAEDRENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQ
        LFRRMRFAK+    +E  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ  SK+KSQ
Subjt:  LFRRMRFAKEEAEDRENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQ

A0A6J1IF90 protein LITTLE ZIPPER 3-like1.5e-1781.16Show/hide
Query:  LFRRMRFAKEEAEDRENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQPS
        LFRRM+FAK+    +E  MEI+NLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ FSK+KSQP+
Subjt:  LFRRMRFAKEEAEDRENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQPS

A0A6J1IWC5 protein LITTLE ZIPPER 1-like5.1e-1880.82Show/hide
Query:  VLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQP
        V  L RRMRF KEEA     +  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ+FSKQK QP
Subjt:  VLALFRRMRFAKEEAEDR--ENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQP

SwissProt top hitse value%identityAlignment
F4IG60 Protein LITTLE ZIPPER 12.3e-0756.67Show/hide
Query:  LFRRMRFAKEEAEDRENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQS
        L RR R  +EE +     ME+ NLKLY+ENQ+II ENE+L+KKA LLH+EN+ L S LQ+
Subjt:  LFRRMRFAKEEAEDRENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQS

Q56WL5 Protein LITTLE ZIPPER 49.0e-0459.18Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QSFSKQKS
        ME  N KLY++N  II+ENERLRKKA +L++ENQ LL +L Q  SK K+
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QSFSKQKS

Q9LXI8 Protein LITTLE ZIPPER 39.0e-0461.22Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QSFSKQKS
        ME  N KL++EN  I++ENERLRKKA LL++ENQ LL QL Q  SK K+
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QSFSKQKS

Q9LZX5 Protein LITTLE ZIPPER 24.6e-0843.3Show/hide
Query:  LSLVFSLPPSPPADS------------SSQAFESLIVLALFRRMRFAKEEAEDRENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL
        + L  S PP P  D+             S+    L +L L RR R  KE+ E     ME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Subjt:  LSLVFSLPPSPPADS------------SSQAFESLIVLALFRRMRFAKEEAEDRENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL

Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding1.6e-0856.67Show/hide
Query:  LFRRMRFAKEEAEDRENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQS
        L RR R  +EE +     ME+ NLKLY+ENQ+II ENE+L+KKA LLH+EN+ L S LQ+
Subjt:  LFRRMRFAKEEAEDRENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQS

AT3G52770.1 protein binding6.4e-0561.22Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QSFSKQKS
        ME  N KL++EN  I++ENERLRKKA LL++ENQ LL QL Q  SK K+
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QSFSKQKS

AT3G60890.1 protein binding3.3e-0943.3Show/hide
Query:  LSLVFSLPPSPPADS------------SSQAFESLIVLALFRRMRFAKEEAEDRENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL
        + L  S PP P  D+             S+    L +L L RR R  KE+ E     ME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Subjt:  LSLVFSLPPSPPADS------------SSQAFESLIVLALFRRMRFAKEEAEDRENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL

AT3G60890.2 protein binding8.0e-0840.82Show/hide
Query:  LSLVFSLPPSPPADSSSQAFESL-------------IVLALFRRMRFAKEEAEDRENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL
        + L  S PP P  D+ +    S              I+    RR R  KE+ E     ME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Subjt:  LSLVFSLPPSPPADSSSQAFESL-------------IVLALFRRMRFAKEEAEDRENTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAAGTCAAAAAGCGGAAGGAGGAGAGCAAGAGAGCAAGAGGAGAGGGTAGAGAATAGAGTTCGGGGTCCGGGCTTAAATACCTGCTCTAGGGTTTTTAGGCATTT
GGATGCGATTCGGGCTAAATCAAGTGGAACCGGGGCGACCAGGGGCACTAGGGACCGAACGGAGGCAGAAAGACTCGGTCGAGGCCAACCATTTGGGTTGGGCCAAGGTC
CGATCCCTCCGACCTTGGCCCGACCCTCTGGCCTGTTTCGCCTCCAGAGTCCATTTTTTGGTCCTATTTTCGGGCTCGTGTCGGATTGTCCTCGTCCGCTCCTTGCACCT
CGAAGTGGCCGAGGCCGACCATTCGGCCAGCTTGCACGAGTCGAGCTCGGTCACCTCCTTTCGGCCCCTGATGTCCCGAATCGCCCCGGTTCTGCCTGGTTTGTCCCGAA
ACACCTCCGAATTCCTAAAAACCCTAGGAGGAGAAACAGTTCCACGCCACCACAAAATGTGCGACTCTTCTCGGTTGATGCTCATTCCCTTCTCTCGCTCGTATTTAGCT
TGCCGCCATCGCCGCCGGCCGATTCGAGTTCACAGGCTTTTGAGAGTCTGATTGTTTTGGCGCTGTTCAGGAGGATGAGATTCGCGAAGGAGGAGGCGGAGGATCGGGAG
AATACGATGGAGATCAAGAATTTGAAACTGTACATGGAGAATCAAAGCATTATTGAGGAGAACGAGCGGCTGAGAAAGAAGGCGTTTCTTCTTCACAAAGAGAATCAGGT
TTTGTTATCTCAACTTCAGAGTTTCTCTAAGCAGAAATCGCAGCCTTCGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAAGTCAAAAAGCGGAAGGAGGAGAGCAAGAGAGCAAGAGGAGAGGGTAGAGAATAGAGTTCGGGGTCCGGGCTTAAATACCTGCTCTAGGGTTTTTAGGCATTT
GGATGCGATTCGGGCTAAATCAAGTGGAACCGGGGCGACCAGGGGCACTAGGGACCGAACGGAGGCAGAAAGACTCGGTCGAGGCCAACCATTTGGGTTGGGCCAAGGTC
CGATCCCTCCGACCTTGGCCCGACCCTCTGGCCTGTTTCGCCTCCAGAGTCCATTTTTTGGTCCTATTTTCGGGCTCGTGTCGGATTGTCCTCGTCCGCTCCTTGCACCT
CGAAGTGGCCGAGGCCGACCATTCGGCCAGCTTGCACGAGTCGAGCTCGGTCACCTCCTTTCGGCCCCTGATGTCCCGAATCGCCCCGGTTCTGCCTGGTTTGTCCCGAA
ACACCTCCGAATTCCTAAAAACCCTAGGAGGAGAAACAGTTCCACGCCACCACAAAATGTGCGACTCTTCTCGGTTGATGCTCATTCCCTTCTCTCGCTCGTATTTAGCT
TGCCGCCATCGCCGCCGGCCGATTCGAGTTCACAGGCTTTTGAGAGTCTGATTGTTTTGGCGCTGTTCAGGAGGATGAGATTCGCGAAGGAGGAGGCGGAGGATCGGGAG
AATACGATGGAGATCAAGAATTTGAAACTGTACATGGAGAATCAAAGCATTATTGAGGAGAACGAGCGGCTGAGAAAGAAGGCGTTTCTTCTTCACAAAGAGAATCAGGT
TTTGTTATCTCAACTTCAGAGTTTCTCTAAGCAGAAATCGCAGCCTTCGATTTGA
Protein sequenceShow/hide protein sequence
MFKSKSGRRRAREQEERVENRVRGPGLNTCSRVFRHLDAIRAKSSGTGATRGTRDRTEAERLGRGQPFGLGQGPIPPTLARPSGLFRLQSPFFGPIFGLVSDCPRPLLAP
RSGRGRPFGQLARVELGHLLSAPDVPNRPGSAWFVPKHLRIPKNPRRRNSSTPPQNVRLFSVDAHSLLSLVFSLPPSPPADSSSQAFESLIVLALFRRMRFAKEEAEDRE
NTMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQSFSKQKSQPSI