CuGenDBv2

Gene ID	Spg031589
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	translocator protein homolog
Genome location	scaffold11:37989156..37995006
RNA-Seq Expression	Spg031589
Synteny	Spg031589
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR004307 - TspO/MBR-related protein IPR038330 - TspO/MBR-related superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_016898980.1 PREDICTED: translocator protein homolog [Cucumis melo]

7.1e-74

87.97

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Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIP+SLTIAVIFLFGRSSRHFPNRNRP+W+ PLW   LSSIGSSFL+GLA+WLVWADGGFHGGSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY
        W+PLVLV+R+V +A LFC LDFVTLFACYR F+RVNPFAKDL+KPCLAWTAYLSAVTY
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY

XP_022945022.1 translocator protein homolog [Cucurbita moschata]

9.3e-74

90.51

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Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIPL+LTIAVIFLFGRSSRHFPNRNRP+WVAPLW  HLSSI SSFLIGLA+WLVWADGGFH GSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY
        WNPLVLV+RA  LA LFC LD VTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL AVTY
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY

XP_022973726.1 translocator protein homolog [Cucurbita maxima]

6.4e-75

91.14

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Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIPL+LTIAVIFLFGRSSRHFPNRNRP+WVAPLW  HLSSI SSFLIGLA+WLVWADGGFH GSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY
        WNPLVLV+RA+ LA LFC LDFVTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL AVTY
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY

XP_023540366.1 translocator protein homolog [Cucurbita pepo subsp. pepo]

3.2e-74

90.51

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Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIPL+LTIAVIFLFGRSSRHFPNRNRP+WVAPLW  HLSSI SSFLIGLA+WLVWADGGFH GSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY
        WNPLVLV+RA+ LA LFC LD VTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL AVTY
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY

XP_038878873.1 translocator protein homolog [Benincasa hispida]

4.0e-77

92.41

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Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRS+RHFPNRNRP+W+ PLW  HLSSIGSSFLIGLA+WLVWADGGFHGGSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY
        WNPLVLV+R+V LA LFC LDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L583 Uncharacterized protein

1.1e-72

86.71

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Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIP+SLTIA IFLFGRSSRH+PNRNRP+W+ PLW   LSSIGSSFL+GLA+WLVWADGGFHGGSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY
        WNPLVLV+R+V +A LFC LD VTLFACY  FKRVNPFAKDL+KPCLAWTAYLSAVTY
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY

A0A1S4DTF2 translocator protein homolog

3.4e-74

87.97

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Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIP+SLTIAVIFLFGRSSRHFPNRNRP+W+ PLW   LSSIGSSFL+GLA+WLVWADGGFHGGSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY
        W+PLVLV+R+V +A LFC LDFVTLFACYR F+RVNPFAKDL+KPCLAWTAYLSAVTY
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY

A0A5D3CWC4 Translocator protein-like protein

3.4e-74

87.97

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Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIP+SLTIAVIFLFGRSSRHFPNRNRP+W+ PLW   LSSIGSSFL+GLA+WLVWADGGFHGGSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY
        W+PLVLV+R+V +A LFC LDFVTLFACYR F+RVNPFAKDL+KPCLAWTAYLSAVTY
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY

A0A6J1FZS9 translocator protein homolog

4.5e-74

90.51

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Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIPL+LTIAVIFLFGRSSRHFPNRNRP+WVAPLW  HLSSI SSFLIGLA+WLVWADGGFH GSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY
        WNPLVLV+RA  LA LFC LD VTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL AVTY
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY

A0A6J1ICB9 translocator protein homolog

3.1e-75

91.14

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Query:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV
        SRPESKYTKAKRALRSLAVSVAIPL+LTIAVIFLFGRSSRHFPNRNRP+WVAPLW  HLSSI SSFLIGLA+WLVWADGGFH GSNALPLYIAHLSLSVV
Subjt:  SRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVV

Query:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY
        WNPLVLV+RA+ LA LFC LDFVTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL AVTY
Subjt:  WNPLVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY

SwissProt top hits

e value

%identity

Alignment

E2RDM9 Translocator protein 2

1.6e-04

29.66

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Query:  AVSVAIP-LSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWAD-GGFHGGSNALPLYIAHLSLSVVWNPLV--LVMRAVPL
        A+ VA+P L   +  +    R  R +    +P W  P        I   F++G AS+LVW D GG  G   ALPL +  + L+V W  L+      A  L
Subjt:  AVSVAIP-LSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWAD-GGFHGGSNALPLYIAHLSLSVVWNPLV--LVMRAVPL

Query:  ASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY
        A L   L +  + +    +  +N  A  L+ P LAW    +++ Y
Subjt:  ASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTY

O82245 Translocator protein homolog

1.0e-27

39.87

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Query:  ESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNP
        + K   AKR L+SL V+VA P+ +T+   +  G S  +        W+ PLW  H + + SS L+GLA+WLVW DGGFH   NAL LY+A   L +VW+P
Subjt:  ESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNP

Query:  LVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAV
        +   + +              LF CY+ F  ++P A +L+KPCLAW A+++AV
Subjt:  LVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAV

Arabidopsis top hits

e value

%identity

Alignment

AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related

7.4e-29

39.87

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Query:  ESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNP
        + K   AKR L+SL V+VA P+ +T+   +  G S  +        W+ PLW  H + + SS L+GLA+WLVW DGGFH   NAL LY+A   L +VW+P
Subjt:  ESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNP

Query:  LVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAV
        +   + +              LF CY+ F  ++P A +L+KPCLAW A+++AV
Subjt:  LVLVMRAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAV

Sequences

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CDS sequence

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ATGACTTCCAGACCGGAATCCAAGTACACCAAGGCCAAGAGAGCGCTCCGATCCCTCGCCGTCTCCGTCGCCATTCCCCTCTCCCTCACAATCGCCGTCATCTTCCTCTT
CGGCCGCTCCTCCCGCCATTTCCCCAACCGGAACCGTCCGGTTTGGGTGGCGCCGCTCTGGTTCTTCCATCTCTCCTCGATCGGCTCCTCCTTCCTGATCGGCCTCGCCT
CCTGGCTCGTTTGGGCCGACGGCGGCTTCCACGGCGGTTCCAATGCCCTTCCGCTCTACATCGCGCATCTCTCGCTCAGCGTCGTTTGGAATCCTCTCGTGCTCGTGATG
CGCGCAGTTCCGCTTGCGTCTCTGTTCTGCGCCTTGGATTTTGTGACTCTGTTTGCTTGTTATCGGACCTTCAAGCGAGTGAATCCCTTCGCTAAGGATCTGATTAAGCC
CTGTTTGGCTTGGACTGCCTATCTCTCTGCTGTTACTTATTGGGTGCGGATTGAACCTCTGACTTCTTGTGCTCGCGCTCTCCTCGTCGGCGCTCGTGCTCCCGCTTTCC
TCGTCGGCGCTCGTGGTCATGGGTCTCACTTGTTCCGTTGGTGCTCGTCGCTGGCTCTCGCCCAGATTAACCCACAGTTCTGTCGTTCCGTTCGTGCATGCTCGATTTTT
CCAGGCTCCATTGTTGTTCAGTTCCGTTGTGGTCTCGTCGCCGGCGCCATCCGTTGTGGTCTCGATTTTTCCTCACCGGTTTTAGCTTTTGCCATTGCTTCGATATCAGT
CCAAGGAGTGAATTCATTGAGTGAATTCATTGTTGTCGATAAATTAATGGATGTTCTTGCCAAGCACGACTTCATCGTCGTTGAGTTCTACGCCTCTGTGGTGTGGGAAT
TGCAAGAAATTGGCAGCAGAGATAGTGCTCAAATTCTTGATCTTAAGCTTGAAATTTTGTTAATTCAATATGGTATCTTCATGGAATAA

mRNA sequence

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Protein sequence

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MTSRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSSRHFPNRNRPVWVAPLWFFHLSSIGSSFLIGLASWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVM
RAVPLASLFCALDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYWVRIEPLTSCARALLVGARAPAFLVGARGHGSHLFRWCSSLALAQINPQFCRSVRACSIF
PGSIVVQFRCGLVAGAIRCGLDFSSPVLAFAIASISVQGVNSLSEFIVVDKLMDVLAKHDFIVVEFYASVVWELQEIGSRDSAQILDLKLEILLIQYGIFME

Spg031589 (gene) of Sponge gourd (cylindrica) v1 genome