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Spg031617 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031617
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalmodulin-binding transcription activator 3
Genome locationscaffold11:36603617..36621279
RNA-Seq ExpressionSpg031617
SyntenySpg031617
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005516 - calmodulin binding (molecular function)
InterPro domainsIPR005559 - CG-1 DNA-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038882529.1 calmodulin-binding transcription activator 3-like isoform X1 [Benincasa hispida]1.3e-3697.44Show/hide
Query:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK
        L+QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGK VKEAHEKLK
Subjt:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK

XP_038882531.1 calmodulin-binding transcription activator 3-like isoform X2 [Benincasa hispida]1.3e-3697.44Show/hide
Query:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK
        L+QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGK VKEAHEKLK
Subjt:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK

XP_038882532.1 calmodulin-binding transcription activator 3-like isoform X3 [Benincasa hispida]1.3e-3697.44Show/hide
Query:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK
        L+QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGK VKEAHEKLK
Subjt:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK

XP_038882533.1 calmodulin-binding transcription activator 3-like isoform X4 [Benincasa hispida]1.3e-3697.44Show/hide
Query:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK
        L+QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGK VKEAHEKLK
Subjt:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK

XP_038882534.1 calmodulin-binding transcription activator 3-like isoform X5 [Benincasa hispida]1.3e-3697.44Show/hide
Query:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK
        L+QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGK VKEAHEKLK
Subjt:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK

TrEMBL top hitse value%identityAlignment
A0A6J1GU72 calmodulin-binding transcription activator 3-like isoform X35.5e-3694.87Show/hide
Query:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK
        LVQILQEAQNRWLRPAEICEILRNY+KFQLAPDPPV+PPAGSLFLFDRKALRYFRKDGH+WRKKKDGK VKEAHEKLK
Subjt:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK

A0A6J1GWP9 calmodulin-binding transcription activator 3-like isoform X15.5e-3694.87Show/hide
Query:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK
        LVQILQEAQNRWLRPAEICEILRNY+KFQLAPDPPV+PPAGSLFLFDRKALRYFRKDGH+WRKKKDGK VKEAHEKLK
Subjt:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK

A0A6J1IRH0 calmodulin-binding transcription activator 3-like isoform X35.5e-3694.87Show/hide
Query:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK
        LVQILQEAQNRWLRPAEICEILRNY+KFQLAPDPPV+PPAGSLFLFDRKALRYFRKDGH+WRKKKDGK VKEAHEKLK
Subjt:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK

A0A6J1IU03 calmodulin-binding transcription activator 3-like isoform X25.5e-3694.87Show/hide
Query:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK
        LVQILQEAQNRWLRPAEICEILRNY+KFQLAPDPPV+PPAGSLFLFDRKALRYFRKDGH+WRKKKDGK VKEAHEKLK
Subjt:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK

A0A6J1IX93 calmodulin-binding transcription activator 3-like isoform X15.5e-3694.87Show/hide
Query:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK
        LVQILQEAQNRWLRPAEICEILRNY+KFQLAPDPPV+PPAGSLFLFDRKALRYFRKDGH+WRKKKDGK VKEAHEKLK
Subjt:  LVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK

SwissProt top hitse value%identityAlignment
Q6NPP4 Calmodulin-binding transcription activator 21.6e-3281.82Show/hide
Query:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV
        Q+L EAQ+RWLRPAEICEILRN++KF +A +PP RPP+GSLFLFDRK LRYFRKDGH WRKKKDGK VKEAHEKLKV
Subjt:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV

Q7XHR2 Calmodulin-binding transcription activator CBT1.0e-1851.81Show/hide
Query:  DWNYLVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV
        D NY  +++ EA  RW RP EI  IL N+ +F++   P  +P +G++ L+DRK +R FRKDGH W+KKKDG+ V+EAHEKLK+
Subjt:  DWNYLVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV

Q8GSA7 Calmodulin-binding transcription activator 34.8e-2972.37Show/hide
Query:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK
        QIL EA++RWLRP EICEIL+NY++FQ++ +PP  P +GS+F+FDRK LRYFRKDGH WRKKKDGK VKEAHE+LK
Subjt:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLK

Q9FY74 Calmodulin-binding transcription activator 14.3e-3075.32Show/hide
Query:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV
        Q+L EAQ+RWLRP EICEIL+NY KF +A + P RP +GSLFLFDRK LRYFRKDGH WRKKKDGK ++EAHEKLKV
Subjt:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV

Q9FYG2 Calmodulin-binding transcription activator 45.3e-2051.16Show/hide
Query:  DSDWNYLVQIL-QEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV
        DS + Y +  L QEA +RWL+P E+  IL+N+    L    P RP +GSL LF+++ L++FRKDGH+WR+K+DG+A+ EAHE+LKV
Subjt:  DSDWNYLVQIL-QEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV

Arabidopsis top hitse value%identityAlignment
AT5G09410.1 ethylene induced calmodulin binding protein3.1e-3175.32Show/hide
Query:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV
        Q+L EAQ+RWLRP EICEIL+NY KF +A + P RP +GSLFLFDRK LRYFRKDGH WRKKKDGK ++EAHEKLKV
Subjt:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV

AT5G09410.2 ethylene induced calmodulin binding protein3.1e-3175.32Show/hide
Query:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV
        Q+L EAQ+RWLRP EICEIL+NY KF +A + P RP +GSLFLFDRK LRYFRKDGH WRKKKDGK ++EAHEKLKV
Subjt:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV

AT5G09410.3 ethylene induced calmodulin binding protein3.1e-3175.32Show/hide
Query:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV
        Q+L EAQ+RWLRP EICEIL+NY KF +A + P RP +GSLFLFDRK LRYFRKDGH WRKKKDGK ++EAHEKLKV
Subjt:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV

AT5G64220.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains1.1e-3381.82Show/hide
Query:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV
        Q+L EAQ+RWLRPAEICEILRN++KF +A +PP RPP+GSLFLFDRK LRYFRKDGH WRKKKDGK VKEAHEKLKV
Subjt:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV

AT5G64220.2 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains1.1e-3381.82Show/hide
Query:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV
        Q+L EAQ+RWLRPAEICEILRN++KF +A +PP RPP+GSLFLFDRK LRYFRKDGH WRKKKDGK VKEAHEKLKV
Subjt:  QILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTCGTCGTCGGAGATTCTGATTGGAACTATCTAGTACAAATACTACAAGAAGCACAGAATCGGTGGCTTCGGCCCGCCGAGATTTGTGAAATTCTTCGAAACTACAGAAA
GTTTCAATTAGCACCAGATCCTCCAGTTCGGCCTCCAGCTGGATCCTTGTTCCTTTTTGATCGGAAAGCACTTAGATATTTTCGTAAGGATGGTCATAGATGGAGGAAGA
AGAAAGATGGAAAAGCTGTCAAAGAAGCCCATGAAAAGTTGAAGGTGTGCTGTTCAATCTGTTGGTAG
mRNA sequenceShow/hide mRNA sequence
GTCGTCGTCGGAGATTCTGATTGGAACTATCTAGTACAAATACTACAAGAAGCACAGAATCGGTGGCTTCGGCCCGCCGAGATTTGTGAAATTCTTCGAAACTACAGAAA
GTTTCAATTAGCACCAGATCCTCCAGTTCGGCCTCCAGCTGGATCCTTGTTCCTTTTTGATCGGAAAGCACTTAGATATTTTCGTAAGGATGGTCATAGATGGAGGAAGA
AGAAAGATGGAAAAGCTGTCAAAGAAGCCCATGAAAAGTTGAAGGTGTGCTGTTCAATCTGTTGGTAG
Protein sequenceShow/hide protein sequence
VVVGDSDWNYLVQILQEAQNRWLRPAEICEILRNYRKFQLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKAVKEAHEKLKVCCSICW