; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031644 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031644
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionB3 domain-containing protein
Genome locationscaffold11:42449686..42451391
RNA-Seq ExpressionSpg031644
SyntenySpg031644
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily
IPR044837 - B3 domain-containing protein REM16-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147119.1 B3 domain-containing protein Os04g0386900-like [Momordica charantia]7.6e-6380.82Show/hide
Query:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+EKP +E  T EP+N EI PL+ KP+HGVIL+KSHVAPI NM LPAKFHSVLPAI+I  VLYCG K+W +DYYGNRRGKSLDTR WRKFVNDNHLKS
Subjt:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI
        GDACVFEL+ECSSS LKFRVQILRGDIPV LHDKFSGE+KDTPI I
Subjt:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI

XP_022941967.1 B3 domain-containing protein Os04g0386900-like [Cucurbita moschata]2.3e-6481.51Show/hide
Query:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+EKP  E    +PQN  ILPL+GKPYHGVILSKSHVAPICNM LPAKFHSVLPAI+IPAVLYC  KKWKIDYYGNRRGK+LDT+QWRKFVNDNHLK 
Subjt:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI
        GDACVFEL+ECSSS++KFRVQILRGDIP  LH+KFSGE+++TPILI
Subjt:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI

XP_022974195.1 B3 domain-containing protein Os04g0386900-like [Cucurbita maxima]2.8e-6582.88Show/hide
Query:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+EKP TE    +PQN  ILPL+GKPYHGVILSKSHVAPICNM LPAKFHSVLPAI+IPAVLYC  KKWKIDYYGNRRGK+LDT+QWRKFVNDNHLK 
Subjt:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI
        GDACVFEL+ECSSS+LKFRVQILRGDIP  LH+KFSGE+++TPILI
Subjt:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI

XP_023539026.1 B3 domain-containing protein Os04g0386900-like [Cucurbita pepo subsp. pepo]8.1e-6581.51Show/hide
Query:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+EKP TE    +PQN  ILPL+GKPYHGVILSKSHVAPICNM +PAKFHSVLPAI+IPAVLYC  KKWKIDYYGNRRGK+LDT+QWRKFVNDNHLK 
Subjt:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI
        GDACVFEL+ECSSS++KFRVQILRGDIP  LH+KFSGE+++TPILI
Subjt:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI

XP_038903804.1 B3 domain-containing protein Os04g0386900-like [Benincasa hispida]3.1e-6480.82Show/hide
Query:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+ KP TE  T EPQ+ EILPL+GKPYH  ILSKSHVAPIC++VLPAKFHS+LPAI+IPAVL+C  KKW IDYYGNRRGK+LDT+QWRKFVNDN LKS
Subjt:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI
        GDACVFEL+ECSSS+LKFRVQILRGDIP  LHDKFSGETKDTPI +
Subjt:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI

TrEMBL top hitse value%identityAlignment
A0A0A0L3V3 TF-B3 domain-containing protein3.8e-6079.17Show/hide
Query:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS  KP TE  T EPQN E +PL+GKPYH  ILSKSHVAPI N+VLPAKFHS+LPAI+IPAVL C  KKWKIDY+GNRRGK+LD++QWRKFVNDN LKS
Subjt:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPI
        GDA VFELLECSSS+LKFRVQIL GDIP+ LHDKFSGETK+TPI
Subjt:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPI

A0A6J1CYN6 B3 domain-containing protein Os04g0386900-like1.5e-5672.6Show/hide
Query:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+EKP +E    EP+ DEI PL+ KP+HGVIL KSHVAP   M LPAKFHSVLPAI+I  V+YCG K+W++DYYGNRRG++LDTR WRKFV++NHLK 
Subjt:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI
        GDACVFEL+ECSSS++KFRVQILRGDIPV LHDKF GE++DTPI I
Subjt:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI

A0A6J1D033 B3 domain-containing protein Os04g0386900-like3.7e-6380.82Show/hide
Query:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+EKP +E  T EP+N EI PL+ KP+HGVIL+KSHVAPI NM LPAKFHSVLPAI+I  VLYCG K+W +DYYGNRRGKSLDTR WRKFVNDNHLKS
Subjt:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI
        GDACVFEL+ECSSS LKFRVQILRGDIPV LHDKFSGE+KDTPI I
Subjt:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI

A0A6J1FTK2 B3 domain-containing protein Os04g0386900-like1.1e-6481.51Show/hide
Query:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+EKP  E    +PQN  ILPL+GKPYHGVILSKSHVAPICNM LPAKFHSVLPAI+IPAVLYC  KKWKIDYYGNRRGK+LDT+QWRKFVNDNHLK 
Subjt:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI
        GDACVFEL+ECSSS++KFRVQILRGDIP  LH+KFSGE+++TPILI
Subjt:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI

A0A6J1IDC2 B3 domain-containing protein Os04g0386900-like1.3e-6582.88Show/hide
Query:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        MQS+EKP TE    +PQN  ILPL+GKPYHGVILSKSHVAPICNM LPAKFHSVLPAI+IPAVLYC  KKWKIDYYGNRRGK+LDT+QWRKFVNDNHLK 
Subjt:  MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI
        GDACVFEL+ECSSS+LKFRVQILRGDIP  LH+KFSGE+++TPILI
Subjt:  GDACVFELLECSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILI

SwissProt top hitse value%identityAlignment
Q2QMT5 B3 domain-containing protein LOC_Os12g400907.5e-0527.62Show/hide
Query:  TEPQNDEILPLT----GKPYHGVILSKSHVAPICNMVLPAKF---HSVLPAIIIPAVLYCGDKKWKIDYYG-NRRGKSLDTRQWRKFVNDNHLKSGDACV
        T  + DEI  L     G P   V+L  +HV     +++P +F   H    +  I  +     +KW + YY  +   +  +  +W KF+ +N L+ G+ C+
Subjt:  TEPQNDEILPLT----GKPYHGVILSKSHVAPICNMVLPAKF---HSVLPAIIIPAVLYCGDKKWKIDYYG-NRRGKSLDTRQWRKFVNDNHLKSGDACV

Query:  FELLE
        FEL++
Subjt:  FELLE

Q7XLP4 B3 domain-containing protein Os04g03869001.1e-1941.09Show/hide
Query:  ILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELL---ECSSSLLK
        +LPL GKPY   I+ KSHV P   +V+P  F  +LP+   PA L    + W + + G R  + L+   WR F  DN L+ GD CVFELL         ++
Subjt:  ILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELL---ECSSSLLK

Query:  FRVQILRGDIPVPLHDKFSGETKDTPILI
        FRVQ+LR +IP  +  +  G T  TPI+I
Subjt:  FRVQILRGDIPVPLHDKFSGETKDTPILI

Q8RYD1 B3 domain-containing protein REM166.1e-0734.34Show/hide
Query:  VILSKSHVAPICNMVLPAKFHSVLPAIII--PAVLYCGDKKW--KIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELLECSSSLLKFRVQILRGD
        V + +SHV   C + +P K+  V   +I     V+     KW  K + +G R    + T  W+KFV DN+L+ GD CVFE     +  L   V I RG+
Subjt:  VILSKSHVAPICNMVLPAKFHSVLPAIII--PAVLYCGDKKW--KIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELLECSSSLLKFRVQILRGD

Q9LHY9 B3 domain-containing protein Os06g01123005.0e-1741.27Show/hide
Query:  GKPYHGVILSKSHVAPICNMVLPAKFHSVL--PAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELLEC-SSSLLKFRVQI
        G P+   +++KSH+ P   M +P +F   L  P     AVL+ G K W   Y G+ + K LD   W +F  DN L  GDACVFEL+   ++  L+F+VQI
Subjt:  GKPYHGVILSKSHVAPICNMVLPAKFHSVL--PAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELLEC-SSSLLKFRVQI

Query:  LRGDIPVPLHDKFSGETKDTPILIID
        LRG +P  +     G T D PILI+D
Subjt:  LRGDIPVPLHDKFSGETKDTPILIID

Q9XIB5 B3 domain-containing protein REM192.2e-0430.08Show/hide
Query:  QSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKF-HSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        +  E+     +T EP N         PY  V+L  S++   C M LP+ F    L  I     L  G+K+W +     + G++  ++ W +F  +N++  
Subjt:  QSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKF-HSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELLECSSSLLK---FRV
        GD CVFELL     +L+   FRV
Subjt:  GDACVFELLECSSSLLK---FRV

Arabidopsis top hitse value%identityAlignment
AT1G49480.1 related to vernalization1 11.5e-0530.08Show/hide
Query:  QSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKF-HSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        +  E+     +T EP N         PY  V+L  S++   C M LP+ F    L  I     L  G+K+W +     + G++  ++ W +F  +N++  
Subjt:  QSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKF-HSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELLECSSSLLK---FRV
        GD CVFELL     +L+   FRV
Subjt:  GDACVFELLECSSSLLK---FRV

AT3G18990.1 AP2/B3-like transcriptional factor family protein1.0e-0429.27Show/hide
Query:  QSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKF-HSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS
        +  E+     +T EP N         P+  V+L  S++   C M LP+ F    L  I     +   +K+W +     + G++  ++ W +F  +N+L  
Subjt:  QSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKF-HSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKS

Query:  GDACVFELLECSSSLLK---FRV
        GD CVFELL     +LK   FRV
Subjt:  GDACVFELLECSSSLLK---FRV

AT4G33280.1 AP2/B3-like transcriptional factor family protein4.3e-0834.34Show/hide
Query:  VILSKSHVAPICNMVLPAKFHSVLPAIII--PAVLYCGDKKW--KIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELLECSSSLLKFRVQILRGD
        V + +SHV   C + +P K+  V   +I     V+     KW  K + +G R    + T  W+KFV DN+L+ GD CVFE     +  L   V I RG+
Subjt:  VILSKSHVAPICNMVLPAKFHSVLPAIII--PAVLYCGDKKW--KIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELLECSSSLLKFRVQILRGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAGAAGAGAAACCTTCGACAGAGTTTGAAACGACGGAGCCGCAAAATGATGAAATTTTGCCCCTCACAGGAAAACCCTACCATGGCGTTATTCTTTCTAAATC
GCATGTCGCTCCCATTTGTAATATGGTTTTGCCAGCCAAATTTCATTCTGTTTTACCTGCTATCATAATCCCTGCGGTTCTTTACTGTGGGGACAAGAAATGGAAGATAG
ATTATTATGGGAACCGACGTGGTAAATCACTTGACACAAGACAGTGGAGGAAGTTTGTTAATGATAATCATCTCAAGTCTGGAGATGCTTGTGTATTTGAGCTATTAGAA
TGCAGCAGCAGCTTACTCAAATTCAGAGTTCAAATTCTCAGAGGTGACATCCCCGTCCCGCTGCACGACAAGTTCAGTGGGGAGACTAAAGACACCCCTATACTCATTAT
TGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCAGAAGAGAAACCTTCGACAGAGTTTGAAACGACGGAGCCGCAAAATGATGAAATTTTGCCCCTCACAGGAAAACCCTACCATGGCGTTATTCTTTCTAAATC
GCATGTCGCTCCCATTTGTAATATGGTTTTGCCAGCCAAATTTCATTCTGTTTTACCTGCTATCATAATCCCTGCGGTTCTTTACTGTGGGGACAAGAAATGGAAGATAG
ATTATTATGGGAACCGACGTGGTAAATCACTTGACACAAGACAGTGGAGGAAGTTTGTTAATGATAATCATCTCAAGTCTGGAGATGCTTGTGTATTTGAGCTATTAGAA
TGCAGCAGCAGCTTACTCAAATTCAGAGTTCAAATTCTCAGAGGTGACATCCCCGTCCCGCTGCACGACAAGTTCAGTGGGGAGACTAAAGACACCCCTATACTCATTAT
TGACTAG
Protein sequenceShow/hide protein sequence
MQSEEKPSTEFETTEPQNDEILPLTGKPYHGVILSKSHVAPICNMVLPAKFHSVLPAIIIPAVLYCGDKKWKIDYYGNRRGKSLDTRQWRKFVNDNHLKSGDACVFELLE
CSSSLLKFRVQILRGDIPVPLHDKFSGETKDTPILIID