; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031667 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031667
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-directed RNA polymerase III subunit rpc6-like
Genome locationscaffold11:41407379..41408086
RNA-Seq ExpressionSpg031667
SyntenySpg031667
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR007832 - RNA polymerase Rpc34
IPR016049 - RNA polymerase Rpc34-like
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13079.1 DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo var. makuwa]6.1e-10778.51Show/hide
Query:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL
        MS+SQGPSSLKRKRP+        GALI  EK+LYDLICSKQSMG+CTFDMKRET FAES VTKSLK+LQ KGL+K+VQHYQNKGKKFY+S DFEP+K L
Subjt:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL

Query:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVK
        TGG+WYRDG LDK+YINTLK VCARMIQ+KK++TIEGIVESFK+SGA KVEL++EQI+EIVNALVLD++V EVKS+G GEF+F+P+GKICYK+CS+GG+K
Subjt:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVK

Query:  GEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF
        GEPKTGAMASIPC VCP+I++CTPNGIISP TCVYYTKWLDF
Subjt:  GEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF

TYK19400.1 DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo var. makuwa]3.6e-10779.01Show/hide
Query:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL
        MS+SQGPSSLKRKRP+       GGALI  EK+LYDLICSKQSMG+CTFDMKRET FAES VTKSLK+LQ KGL+K+VQHYQNKGKKFY+S DFEP+K L
Subjt:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL

Query:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSK-GGV
        TGG+WYRDG LDK+YINTLK VCARMIQ+KK++TIEGIVESFK+SGA KVELS+EQI+EIVNALVLD++VMEVKS+G GEF+F+P+GKICYK+C++ GG+
Subjt:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSK-GGV

Query:  KGEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF
        KGEPK GAMASIPC VCP+I+YCTPNGIISP TCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF

XP_008439941.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo]6.1e-10778.51Show/hide
Query:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL
        MS+SQGPSSLKRKRP+        GALI  EK+LYDLICSKQSMG+CTFDMKRET FAES VTKSLK+LQ KGL+K+VQHYQNKGKKFY+S DFEP+K L
Subjt:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL

Query:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVK
        TGG+WYRDG LDK+YINTLK VCARMIQ+KK++TIEGIVESFK+SGA KVEL++EQI+EIVNALVLD++V EVKS+G GEF+F+P+GKICYK+CS+GG+K
Subjt:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVK

Query:  GEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF
        GEPKTGAMASIPC VCP+I++CTPNGIISP TCVYYTKWLDF
Subjt:  GEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF

XP_008448982.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo]3.6e-10779.01Show/hide
Query:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL
        MS+SQGPSSLKRKRP+       GGALI  EK+LYDLICSKQSMG+CTFDMKRET FAES VTKSLK+LQ KGL+K+VQHYQNKGKKFY+S DFEP+K L
Subjt:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL

Query:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSK-GGV
        TGG+WYRDG LDK+YINTLK VCARMIQ+KK++TIEGIVESFK+SGA KVELS+EQI+EIVNALVLD++VMEVKS+G GEF+F+P+GKICYK+C++ GG+
Subjt:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSK-GGV

Query:  KGEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF
        KGEPK GAMASIPC VCP+I+YCTPNGIISP TCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF

XP_022149571.1 DNA-directed RNA polymerase III subunit rpc6 isoform X1 [Momordica charantia]6.1e-10780.25Show/hide
Query:  MSRSQGPSSLKRKRPE---GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGD
        MSRSQGPSSLKRKRP+   GGALIEHEK+LYDLICSKQSMG+   D+KRET +A+S VTKSLKALQAKG++K+V+HYQNKGKKFY+SKDFEPSK LTGG+
Subjt:  MSRSQGPSSLKRKRPE---GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGD

Query:  WYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVKGEPK
        WY +G LD+EYINTLKG C RMIQK K+ TIEGIV+SFK+SGASKV+LS+EQIQEIVNALVLD+EVMEVKS G+GEFDF+P+GKICYK  +KGGVKGEPK
Subjt:  WYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVKGEPK

Query:  TGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF
        TGAMASIPC VCP+IS+CTPNG+ISP+TCVYYTKWLDF
Subjt:  TGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF

TrEMBL top hitse value%identityAlignment
A0A1S3BL06 DNA-directed RNA polymerase III subunit rpc6-like1.7e-10779.01Show/hide
Query:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL
        MS+SQGPSSLKRKRP+       GGALI  EK+LYDLICSKQSMG+CTFDMKRET FAES VTKSLK+LQ KGL+K+VQHYQNKGKKFY+S DFEP+K L
Subjt:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL

Query:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSK-GGV
        TGG+WYRDG LDK+YINTLK VCARMIQ+KK++TIEGIVESFK+SGA KVELS+EQI+EIVNALVLD++VMEVKS+G GEF+F+P+GKICYK+C++ GG+
Subjt:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSK-GGV

Query:  KGEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF
        KGEPK GAMASIPC VCP+I+YCTPNGIISP TCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF

A0A5A7UBI4 DNA-directed RNA polymerase III subunit RPC6-like2.9e-10778.51Show/hide
Query:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL
        MS+SQGPSSLKRKRP+        GALI  EK+LYDLICSKQSMG+CTFDMKRET FAES VTKSLK+LQ KGL+K+VQHYQNKGKKFY+S DFEP+K L
Subjt:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL

Query:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVK
        TGG+WYRDG LDK+YINTLK VCARMIQ+KK++TIEGIVESFK+SGA KVEL++EQI+EIVNALVLD++V EVKS+G GEF+F+P+GKICYK+CS+GG+K
Subjt:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVK

Query:  GEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF
        GEPKTGAMASIPC VCP+I++CTPNGIISP TCVYYTKWLDF
Subjt:  GEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF

A0A5D3CS47 DNA-directed RNA polymerase III subunit RPC6-like2.9e-10778.51Show/hide
Query:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL
        MS+SQGPSSLKRKRP+        GALI  EK+LYDLICSKQSMG+CTFDMKRET FAES VTKSLK+LQ KGL+K+VQHYQNKGKKFY+S DFEP+K L
Subjt:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL

Query:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVK
        TGG+WYRDG LDK+YINTLK VCARMIQ+KK++TIEGIVESFK+SGA KVEL++EQI+EIVNALVLD++V EVKS+G GEF+F+P+GKICYK+CS+GG+K
Subjt:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVK

Query:  GEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF
        GEPKTGAMASIPC VCP+I++CTPNGIISP TCVYYTKWLDF
Subjt:  GEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF

A0A5D3D7H7 DNA-directed RNA polymerase III subunit rpc6-like1.7e-10779.01Show/hide
Query:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL
        MS+SQGPSSLKRKRP+       GGALI  EK+LYDLICSKQSMG+CTFDMKRET FAES VTKSLK+LQ KGL+K+VQHYQNKGKKFY+S DFEP+K L
Subjt:  MSRSQGPSSLKRKRPE-------GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKAL

Query:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSK-GGV
        TGG+WYRDG LDK+YINTLK VCARMIQ+KK++TIEGIVESFK+SGA KVELS+EQI+EIVNALVLD++VMEVKS+G GEF+F+P+GKICYK+C++ GG+
Subjt:  TGGDWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSK-GGV

Query:  KGEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF
        KGEPK GAMASIPC VCP+I+YCTPNGIISP TCVYYTKWLDF
Subjt:  KGEPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF

A0A6J1D8D1 DNA-directed RNA polymerase III subunit rpc6 isoform X12.9e-10780.25Show/hide
Query:  MSRSQGPSSLKRKRPE---GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGD
        MSRSQGPSSLKRKRP+   GGALIEHEK+LYDLICSKQSMG+   D+KRET +A+S VTKSLKALQAKG++K+V+HYQNKGKKFY+SKDFEPSK LTGG+
Subjt:  MSRSQGPSSLKRKRPE---GGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGD

Query:  WYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVKGEPK
        WY +G LD+EYINTLKG C RMIQK K+ TIEGIV+SFK+SGASKV+LS+EQIQEIVNALVLD+EVMEVKS G+GEFDF+P+GKICYK  +KGGVKGEPK
Subjt:  WYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVKGEPK

Query:  TGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF
        TGAMASIPC VCP+IS+CTPNG+ISP+TCVYYTKWLDF
Subjt:  TGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF

SwissProt top hitse value%identityAlignment
P91529 Probable DNA-directed RNA polymerase III subunit RPC65.1e-1627.54Show/hide
Query:  GPSSLKRKRPEGGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGDWYRDGILD
        G   LK    E  A  E E+++Y LI   ++ G+   +++  +   +  + K+LK+L+ K L+K ++      +K Y+    EP  +LTGG +Y D  LD
Subjt:  GPSSLKRKRPEGGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGDWYRDGILD

Query:  KEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLD--------HEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVKGEPK
         E INTL  VC      ++   I+    + +    +     +E  Q I    VL+          ++EV +   G  +    GKI  + C          
Subjt:  KEYINTLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLD--------HEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVKGEPK

Query:  TGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWL
           + S+PCA+CP +  C P  +ISP++C Y   WL
Subjt:  TGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWL

Q2T9S3 DNA-directed RNA polymerase III subunit RPC66.3e-2230.25Show/hide
Query:  EKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGDWYRDGILDKEYINTLKGVCARMIQKK
        EK++Y +I    + G+ + D++ ++N   + + K LK L++K L+K V+      KK YM  + +P +++TGG WY D   + E++  L   C + +Q K
Subjt:  EKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGDWYRDGILDKEYINTLKGVCARMIQKK

Query:  KMITIEGIV-------ESFKRS----------GASKVELSKEQIQEIVNALVLDHEV----MEVKSNGTGEFD-----FMPVGKICYKFCSKGGVKGEPK
             E           SF  S          G SKVELS E I+ I+N L+ D +V    +  K    G  D     +  V  I             P 
Subjt:  KMITIEGIV-------ESFKRS----------GASKVELSKEQIQEIVNALVLDHEV----MEVKSNGTGEFD-----FMPVGKICYKFCSKGGVKGEPK

Query:  TGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF
        TG +   PC +CP    C   G ISP  C+Y T+WL+F
Subjt:  TGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF

Q86JM3 DNA-directed RNA polymerase III subunit rpc63.3e-2328.75Show/hide
Query:  MSRSQGPSSLKRKRPEGGA----LIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGG
        +  S   +S K   PE  A    L   + ++Y LI +  + G  T ++K  + + +  +TK LK L+++ L+K V+  Q+  KK YM  + EPS+ +TGG
Subjt:  MSRSQGPSSLKRKRPEGGA----LIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGG

Query:  DWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKR--SGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVKG
          Y D   D +YI  +K      +  K  + +  I+   ++    A+   L  E IQ +VN ++ D ++ E++    G       G I YK       K 
Subjt:  DWYRDGILDKEYINTLKGVCARMIQKKKMITIEGIVESFKR--SGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVKG

Query:  EPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLD
                ++PC  CP    C+ NG++SPK CVY+ ++L+
Subjt:  EPKTGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLD

Q921X6 DNA-directed RNA polymerase III subunit RPC62.8e-2230.25Show/hide
Query:  EKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGDWYRDGILDKEYINTLKGVCARMIQKK
        EK++Y +I    + G+ + D++ ++N   + + K LK L++K L+K V+      KK YM  + +P +++TGG WY D   + E++  L   C + +Q K
Subjt:  EKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGDWYRDGILDKEYINTLKGVCARMIQKK

Query:  KMITIEG----IVE---SFKRS----------GASKVELSKEQIQEIVNALVLDHEV----MEVKSNGTGEFD-----FMPVGKICYKFCSKGGVKGEPK
             E     +++   SF  S          G SKVELS E I+ I+N L+ D +V    +  K    G  D     +  V  I             P 
Subjt:  KMITIEG----IVE---SFKRS----------GASKVELSKEQIQEIVNALVLDHEV----MEVKSNGTGEFD-----FMPVGKICYKFCSKGGVKGEPK

Query:  TGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF
        TG + + PC +CP    C   G ISP  C+Y T+WL+F
Subjt:  TGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF

Q9H1D9 DNA-directed RNA polymerase III subunit RPC66.3e-2230.25Show/hide
Query:  EKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGDWYRDGILDKEYINTLKGVCARMIQKK
        EK++Y +I    + G+ + D++ ++N   + + K LK L++K L+K V+      KK YM  + +P +++TGG WY D   + E++  L   C + +Q K
Subjt:  EKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGDWYRDGILDKEYINTLKGVCARMIQKK

Query:  KMITIEGIV-------ESFKRS----------GASKVELSKEQIQEIVNALVLDHEV----MEVKSNGTGEFD-----FMPVGKICYKFCSKGGVKGEPK
             E           SF  S          G SKVELS E I+ I+N L+ D +V    +  K    G  D     +  V  I             P 
Subjt:  KMITIEGIV-------ESFKRS----------GASKVELSKEQIQEIVNALVLDHEV----MEVKSNGTGEFD-----FMPVGKICYKFCSKGGVKGEPK

Query:  TGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF
        TG +   PC +CP    C   G ISP  C+Y T+WL+F
Subjt:  TGAMASIPCAVCPQISYCTPNGIISPKTCVYYTKWLDF

Arabidopsis top hitse value%identityAlignment
AT5G23710.1 DNA binding;DNA-directed RNA polymerases7.8e-5244.83Show/hide
Query:  KRKRPE----GGALIE-HEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGDWYRDGILD
        KRKRP+    GG L E HEK L DLI   Q  G   F++KRE     + VT+ + +L+ K L+K V +  NKG K Y++ +FEP   LTGG+WY DG LD
Subjt:  KRKRPE----GGALIE-HEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGDWYRDGILD

Query:  KEYINTLKGVCARMIQ--KKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVKGEPKTGAMAS
           I  LK  C  +++  +++++T+E +   F      + +LS +Q +EI+  L+LD+ +MEVKSNG  EF    +G++CY+   K    GEP+ GA AS
Subjt:  KEYINTLKGVCARMIQ--KKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVKGEPKTGAMAS

Query:  IPCAVCPQISYCTPNGIISPKTCVYYTKWLDF
        IPC VCP I+ C+P+G+ISP TCVY+ KWLDF
Subjt:  IPCAVCPQISYCTPNGIISPKTCVYYTKWLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGATCACAAGGGCCATCATCACTGAAAAGAAAAAGGCCAGAAGGAGGAGCTCTAATTGAGCATGAAAAAATGCTCTATGATCTGATTTGCAGCAAGCAAAGCAT
GGGGATGTGCACATTCGACATGAAAAGAGAGACAAATTTTGCTGAAAGCACAGTAACTAAATCACTCAAGGCCCTTCAAGCCAAAGGCCTGGTAAAAGTGGTTCAGCACT
ATCAGAACAAAGGGAAGAAATTCTACATGTCGAAAGATTTCGAACCATCGAAAGCGCTGACCGGAGGAGATTGGTACCGGGACGGGATTCTGGACAAGGAATATATCAAT
ACTCTGAAAGGGGTTTGTGCAAGAATGATACAGAAGAAGAAGATGATCACCATTGAAGGAATTGTGGAGTCTTTCAAGAGGAGTGGAGCTTCTAAAGTGGAGTTGTCTAA
GGAGCAAATTCAAGAGATTGTGAATGCTTTGGTGTTGGACCATGAAGTAATGGAGGTGAAGAGCAATGGAACAGGAGAATTTGATTTTATGCCTGTTGGGAAGATTTGTT
ATAAATTTTGTTCTAAAGGAGGAGTTAAAGGGGAGCCCAAAACAGGGGCAATGGCTTCTATTCCTTGTGCAGTTTGTCCACAGATTAGTTATTGTACACCAAATGGCATC
ATTTCGCCCAAGACTTGTGTGTATTACACCAAGTGGTTAGATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGATCACAAGGGCCATCATCACTGAAAAGAAAAAGGCCAGAAGGAGGAGCTCTAATTGAGCATGAAAAAATGCTCTATGATCTGATTTGCAGCAAGCAAAGCAT
GGGGATGTGCACATTCGACATGAAAAGAGAGACAAATTTTGCTGAAAGCACAGTAACTAAATCACTCAAGGCCCTTCAAGCCAAAGGCCTGGTAAAAGTGGTTCAGCACT
ATCAGAACAAAGGGAAGAAATTCTACATGTCGAAAGATTTCGAACCATCGAAAGCGCTGACCGGAGGAGATTGGTACCGGGACGGGATTCTGGACAAGGAATATATCAAT
ACTCTGAAAGGGGTTTGTGCAAGAATGATACAGAAGAAGAAGATGATCACCATTGAAGGAATTGTGGAGTCTTTCAAGAGGAGTGGAGCTTCTAAAGTGGAGTTGTCTAA
GGAGCAAATTCAAGAGATTGTGAATGCTTTGGTGTTGGACCATGAAGTAATGGAGGTGAAGAGCAATGGAACAGGAGAATTTGATTTTATGCCTGTTGGGAAGATTTGTT
ATAAATTTTGTTCTAAAGGAGGAGTTAAAGGGGAGCCCAAAACAGGGGCAATGGCTTCTATTCCTTGTGCAGTTTGTCCACAGATTAGTTATTGTACACCAAATGGCATC
ATTTCGCCCAAGACTTGTGTGTATTACACCAAGTGGTTAGATTTTTAA
Protein sequenceShow/hide protein sequence
MSRSQGPSSLKRKRPEGGALIEHEKMLYDLICSKQSMGMCTFDMKRETNFAESTVTKSLKALQAKGLVKVVQHYQNKGKKFYMSKDFEPSKALTGGDWYRDGILDKEYIN
TLKGVCARMIQKKKMITIEGIVESFKRSGASKVELSKEQIQEIVNALVLDHEVMEVKSNGTGEFDFMPVGKICYKFCSKGGVKGEPKTGAMASIPCAVCPQISYCTPNGI
ISPKTCVYYTKWLDF