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Spg031672 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031672
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLIM domain-containing protein PLIM2b-like
Genome locationscaffold11:43190470..43191282
RNA-Seq ExpressionSpg031672
SyntenySpg031672
Gene Ontology termsGO:0051017 - actin filament bundle assembly (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR001781 - Zinc finger, LIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048980.1 LIM domain-containing protein PLIM2b-like [Cucumis melo var. makuwa]4.2e-4392.47Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQ-SSTTLLPISPNFLSL
        MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVL+CKTHFEQLFKESGNFSKNFQ SSTT+LPISP F  L
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQ-SSTTLLPISPNFLSL

XP_004133874.1 LIM domain-containing protein PLIM2b [Cucumis sativus]3.7e-3990.48Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSSTTLLP
        MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVL+CKTHFEQLFKESGNFSKNFQ+ ++  P
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSSTTLLP

XP_008438068.1 PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo]8.2e-3996.15Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQS
        MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVL+CKTHFEQLFKESGNFSKNFQ+
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQS

XP_038891725.1 LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida]2.8e-3997.47Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSS
        MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHK CFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQS+
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSS

XP_038891791.1 LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida]8.2e-3997.44Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQS
        MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHK CFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQ+
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQS

TrEMBL top hitse value%identityAlignment
A0A0A0L6A8 Uncharacterized protein1.8e-3990.48Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSSTTLLP
        MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVL+CKTHFEQLFKESGNFSKNFQ+ ++  P
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSSTTLLP

A0A1S3AVG8 LIM domain-containing protein PLIM2b-like4.0e-3996.15Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQS
        MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVL+CKTHFEQLFKESGNFSKNFQ+
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQS

A0A5D3D2N0 LIM domain-containing protein PLIM2b-like2.0e-4392.47Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQ-SSTTLLPISPNFLSL
        MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVL+CKTHFEQLFKESGNFSKNFQ SSTT+LPISP F  L
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQ-SSTTLLPISPNFLSL

A0A6J1F6K2 LIM domain-containing protein PLIM2c-like1.5e-3893.67Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSS
        M+FTGTLDKCKACDKTVYVV+LLSLEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVL+CKTHFEQLFKESGNFSKNFQ+S
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSS

A0A6J1IIB7 LIM domain-containing protein PLIM2c-like1.5e-3893.67Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSS
        M+FTGTLDKCKACDKTVYVV+LLSLEGNPYHK+CFKCSHCKGTLSMSSYSWMDGVL+CKTHFEQLFKESGNFSKNFQ+S
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSS

SwissProt top hitse value%identityAlignment
O80839 LIM domain-containing protein PLIM2a2.6e-3577.38Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSSTTLLP
        M+FTGTLDKCKACDKTVYV+DLL+LEGN YHK+CF+C+HCKGTL +S+YS MDGVL+CK HFEQLFKESGN+SKNFQ+  T  P
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSSTTLLP

Q1ECF5 LIM domain-containing protein PLIM2b5.2e-3678.57Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSSTTLLP
        M+FTGTLDKC  CDKTVYVVD+LS+EG PYHK+CF+C+HCKGTL MS+YS MDGVL+CKTHFEQLFKESGNFSKNFQ   T  P
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSSTTLLP

Q500W4 LIM domain-containing protein PLIM2c6.4e-3479.49Show/hide
Query:  AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSS
        AFTGT DKCKACDKTVYV+DL++LEG PYHK+CF+CSHC GTL + +YS MDGVL+CKTHFEQLFKESGNFSKNFQ++
Subjt:  AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSS

Q7F9R9 LIM domain-containing protein PLIM2b8.6e-3176.32Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNF
        M+FTGT DKC ACDKTV+ +DLL+ +G PYHK CFKCSHCKG LSM SYS MDGVL+CKTHFEQLFKE+G+FSK F
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNF

Q9M047 LIM domain-containing protein WLIM2b2.1e-2971.79Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQS
        M+FTGT  KCKAC+KTVY V+LLS +G  YHK+CFKC+HCK  L +SSYS M+GVL+CK HFEQLFKESG+F+KNFQS
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQS

Arabidopsis top hitse value%identityAlignment
AT1G01780.1 GATA type zinc finger transcription factor family protein3.7e-3778.57Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSSTTLLP
        M+FTGTLDKC  CDKTVYVVD+LS+EG PYHK+CF+C+HCKGTL MS+YS MDGVL+CKTHFEQLFKESGNFSKNFQ   T  P
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSSTTLLP

AT2G45800.1 GATA type zinc finger transcription factor family protein1.8e-3677.38Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSSTTLLP
        M+FTGTLDKCKACDKTVYV+DLL+LEGN YHK+CF+C+HCKGTL +S+YS MDGVL+CK HFEQLFKESGN+SKNFQ+  T  P
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSSTTLLP

AT3G55770.1 GATA type zinc finger transcription factor family protein1.5e-3071.79Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQS
        M+FTGT  KCKAC+KTVY V+LLS +G  YHK+CFKC+HCK  L +SSYS M+GVL+CK HFEQLFKESG+F+KNFQS
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQS

AT3G55770.2 GATA type zinc finger transcription factor family protein1.5e-3071.79Show/hide
Query:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQS
        M+FTGT  KCKAC+KTVY V+LLS +G  YHK+CFKC+HCK  L +SSYS M+GVL+CK HFEQLFKESG+F+KNFQS
Subjt:  MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQS

AT3G61230.1 GATA type zinc finger transcription factor family protein4.5e-3579.49Show/hide
Query:  AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSS
        AFTGT DKCKACDKTVYV+DL++LEG PYHK+CF+CSHC GTL + +YS MDGVL+CKTHFEQLFKESGNFSKNFQ++
Subjt:  AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTACGTCGTTGATTTGTTGTCCCTTGAAGGGAATCCTTATCACAAGAATTGCTTCAAATG
CAGCCATTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGACGGTGTCTTGTTTTGCAAGACTCATTTCGAGCAGCTCTTTAAAGAATCTGGAAATTTCAGCA
AGAACTTTCAAAGTAGTACAACATTACTTCCCATTTCTCCCAATTTTTTATCTCTTTTTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTACGTCGTTGATTTGTTGTCCCTTGAAGGGAATCCTTATCACAAGAATTGCTTCAAATG
CAGCCATTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGACGGTGTCTTGTTTTGCAAGACTCATTTCGAGCAGCTCTTTAAAGAATCTGGAAATTTCAGCA
AGAACTTTCAAAGTAGTACAACATTACTTCCCATTTCTCCCAATTTTTTATCTCTTTTTGTCTGA
Protein sequenceShow/hide protein sequence
MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSSTTLLPISPNFLSLFV