; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031695 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031695
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase RBBP6 isoform X2
Genome locationscaffold11:38126145..38127171
RNA-Seq ExpressionSpg031695
SyntenySpg031695
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582225.1 hypothetical protein SDJN03_22227, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5468.13Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPE
        M+DL+EEERRALRGSKFAPLPSQPTSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDP+GLS+INP ILELAV+NAKASVLS SGTNIRHVD+FDDPE
Subjt:  MDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPE

Query:  GCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL
          FD+GEA+NSEPKK+K   K KK KK K +K                       +     ++IVEDS C VGK+PKKKL L
Subjt:  GCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL

XP_022956118.1 uncharacterized protein LOC111457905 isoform X1 [Cucurbita moschata]6.5e-5669.23Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPE
        M+DL+EEERRALRGSKFAPLPSQPTSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDP+GLSSINP ILELAV+NAKASVLS SGTNIRHVD+FDDPE
Subjt:  MDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPE

Query:  GCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL
          FD+GEA+NSEPKK+K   KK KK K K+ K                             ++IVEDS CGVGK+PKKKL L
Subjt:  GCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL

XP_022956119.1 uncharacterized protein LOC111457905 isoform X2 [Cucurbita moschata]1.9e-5569.23Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPE
        M+DL+EEERRALRGSKFAPLPSQPTSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDP+GLSSINP ILELAV+NAKASVLS SGTNIRHVD+FDDPE
Subjt:  MDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPE

Query:  GCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL
          FD+GEA+NSEPKK+K   KK KK K K+ K                             ++IVEDS CGVGK+PKKKL L
Subjt:  GCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL

XP_022979960.1 uncharacterized protein LOC111479494 [Cucurbita maxima]8.5e-5669.89Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPE
        M+DL+EEERRALRGSKFAPLPSQPTSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDP+GLSSINP ILELAV+NAKASVLS SGTNIRHVD+FDDPE
Subjt:  MDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPE

Query:  GCFDEGEAVNSEPKKR----KKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL
          FD+GEA+NSEPKK+    KK+KK KK KK KRQK                               IVEDS CGVGK+PKKKL L
Subjt:  GCFDEGEAVNSEPKKR----KKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL

XP_023527659.1 uncharacterized protein LOC111790822 isoform X1 [Cucurbita pepo subsp. pepo]1.2e-5468.85Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPT-SSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDP
        M+DL+EEERRALRGSKFAPLPSQPT SSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDP+GLSSINP ILELAV+NAKASVLS SGTNIRHVD+FDDP
Subjt:  MDDLTEEERRALRGSKFAPLPSQPT-SSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDP

Query:  EGCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL
        E  FD+GEA+NSEPKK+K   KK KK K K+ K                             ++IVEDS CGVGK+PKKKL L
Subjt:  EGCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL

TrEMBL top hitse value%identityAlignment
A0A0A0LAK0 Uncharacterized protein1.2e-5267.39Show/hide
Query:  MAMDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDD
        M M+DLTEEERRALRGSKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL RKL+QDP+ LSSINP IL+LAV+NAKASV S SGTNIRHVD+FDD
Subjt:  MAMDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDD

Query:  PEGCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL
        PE  FDEGE++NSEPKK+KK  KKKK K KK ++                             ++IVEDS+CGVG KPKKKL L
Subjt:  PEGCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL

A0A1S3AY37 uncharacterized protein LOC1034838322.3e-5166.3Show/hide
Query:  MAMDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDD
        M M+DLTEEERRALRGSKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL RKLHQDP+  SSINP IL+LAV+NAKASV S SGTNIRHVD+FDD
Subjt:  MAMDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDD

Query:  PEGCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKK
        PE  FDEGE++NSEPKK+KK  KKKK K KK ++                             ++IVEDS+CGVGK P  K
Subjt:  PEGCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKK

A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X13.2e-5669.23Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPE
        M+DL+EEERRALRGSKFAPLPSQPTSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDP+GLSSINP ILELAV+NAKASVLS SGTNIRHVD+FDDPE
Subjt:  MDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPE

Query:  GCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL
          FD+GEA+NSEPKK+K   KK KK K K+ K                             ++IVEDS CGVGK+PKKKL L
Subjt:  GCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL

A0A6J1GY51 uncharacterized protein LOC111457905 isoform X29.2e-5669.23Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPE
        M+DL+EEERRALRGSKFAPLPSQPTSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDP+GLSSINP ILELAV+NAKASVLS SGTNIRHVD+FDDPE
Subjt:  MDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPE

Query:  GCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL
          FD+GEA+NSEPKK+K   KK KK K K+ K                             ++IVEDS CGVGK+PKKKL L
Subjt:  GCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL

A0A6J1IUT6 uncharacterized protein LOC1114794944.1e-5669.89Show/hide
Query:  MDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPE
        M+DL+EEERRALRGSKFAPLPSQPTSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDP+GLSSINP ILELAV+NAKASVLS SGTNIRHVD+FDDPE
Subjt:  MDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPE

Query:  GCFDEGEAVNSEPKKR----KKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL
          FD+GEA+NSEPKK+    KK+KK KK KK KRQK                               IVEDS CGVGK+PKKKL L
Subjt:  GCFDEGEAVNSEPKKR----KKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18540.1 unknown protein2.0e-3463.24Show/hide
Query:  DDLTEEERRALRGSKFAPLPSQPTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVL----SGSGTNIRHVDSF
        ++LTE+E+RALRGSKFAPL S P+SSRS+ PRLAHPGGPLKTNKAAALAKFLERKL QDP+GL+SI+P ++ELAVKNAK +V+    S SG  I+HV SF
Subjt:  DDLTEEERRALRGSKFAPLPSQPTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVL----SGSGTNIRHVDSF

Query:  DDPEGCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQK
        +D E   D+ +  N++  K+KK K  KKKK++K++K
Subjt:  DDPEGCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQK

AT5G18540.2 unknown protein2.0e-3463.24Show/hide
Query:  DDLTEEERRALRGSKFAPLPSQPTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVL----SGSGTNIRHVDSF
        ++LTE+E+RALRGSKFAPL S P+SSRS+ PRLAHPGGPLKTNKAAALAKFLERKL QDP+GL+SI+P ++ELAVKNAK +V+    S SG  I+HV SF
Subjt:  DDLTEEERRALRGSKFAPLPSQPTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVL----SGSGTNIRHVDSF

Query:  DDPEGCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQK
        +D E   D+ +  N++  K+KK K  KKKK++K++K
Subjt:  DDPEGCFDEGEAVNSEPKKRKKDKKKKKKKKKKRQK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGACGATCTAACCGAAGAAGAAAGACGCGCTTTACGGGGCAGCAAATTCGCGCCGCTCCCATCCCAACCCACTTCCTCTCGATCTCAGCCAAGGTTGGCTCA
CCCAGGTGGACCATTGAAGACCAACAAGGCGGCGGCTCTGGCCAAGTTTCTCGAGAGAAAGTTGCACCAAGATCCCCATGGCTTGTCTTCCATCAATCCTGACATTTTGG
AGCTCGCCGTCAAGAATGCCAAGGCCTCTGTTCTTTCTGGTTCTGGCACAAATATTCGCCATGTGGATTCGTTTGATGACCCTGAGGGCTGTTTTGATGAAGGGGAAGCC
GTGAATTCTGAGCCTAAAAAGCGAAAGAAGGACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCAAAAGGTTGGAATTCCTTCATGGTTTTGTGTTAAGCTCTATAT
AGTTCTAGTGTTGCCTCTATTTCCTCGTGATAGATATGTTGTGCTTGTGCGGCAGATTGTTGAGGACTCCGATTGTGGCGTTGGGAAAAAGCCCAAAAAGAAGTTGATAT
TGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATGGACGATCTAACCGAAGAAGAAAGACGCGCTTTACGGGGCAGCAAATTCGCGCCGCTCCCATCCCAACCCACTTCCTCTCGATCTCAGCCAAGGTTGGCTCA
CCCAGGTGGACCATTGAAGACCAACAAGGCGGCGGCTCTGGCCAAGTTTCTCGAGAGAAAGTTGCACCAAGATCCCCATGGCTTGTCTTCCATCAATCCTGACATTTTGG
AGCTCGCCGTCAAGAATGCCAAGGCCTCTGTTCTTTCTGGTTCTGGCACAAATATTCGCCATGTGGATTCGTTTGATGACCCTGAGGGCTGTTTTGATGAAGGGGAAGCC
GTGAATTCTGAGCCTAAAAAGCGAAAGAAGGACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCAAAAGGTTGGAATTCCTTCATGGTTTTGTGTTAAGCTCTATAT
AGTTCTAGTGTTGCCTCTATTTCCTCGTGATAGATATGTTGTGCTTGTGCGGCAGATTGTTGAGGACTCCGATTGTGGCGTTGGGAAAAAGCCCAAAAAGAAGTTGATAT
TGTGA
Protein sequenceShow/hide protein sequence
MAMDDLTEEERRALRGSKFAPLPSQPTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPHGLSSINPDILELAVKNAKASVLSGSGTNIRHVDSFDDPEGCFDEGEA
VNSEPKKRKKDKKKKKKKKKKRQKVGIPSWFCVKLYIVLVLPLFPRDRYVVLVRQIVEDSDCGVGKKPKKKLIL