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Spg031703 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031703
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDynein light chain
Genome locationscaffold11:37813924..37816675
RNA-Seq ExpressionSpg031703
SyntenySpg031703
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030286 - dynein complex (cellular component)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597532.1 Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3994.44Show/hide
Query:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        MN DSKRSNP PLMVKPESEDRKPSSAA VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNF
Subjt:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF

KAG7028990.1 Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3994.44Show/hide
Query:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        MN DSKRSNP PLMVKPESEDRKPSSAA VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNF
Subjt:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF

XP_022945423.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]1.3e-3994.44Show/hide
Query:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        MN DSKRSNP PLMVKPESEDRKPSSAA VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNF
Subjt:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF

XP_022973755.1 dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita maxima]1.6e-3793.33Show/hide
Query:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        MN DSKRSNP  LMVKPESEDRKPSSAA VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNF
Subjt:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF

XP_022973756.1 dynein light chain 1, cytoplasmic-like isoform X2 [Cucurbita maxima]5.5e-3890.43Show/hide
Query:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFDDAL
        MN DSKRSNP  LMVKPESEDRKPSSAA VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNF  A+
Subjt:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFDDAL

TrEMBL top hitse value%identityAlignment
A0A6J1G0U9 Dynein light chain6.4e-4094.44Show/hide
Query:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        MN DSKRSNP PLMVKPESEDRKPSSAA VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNF
Subjt:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF

A0A6J1GVA3 Dynein light chain2.5e-3691.21Show/hide
Query:  MNQDSKRSNPGPLMVKPESEDRKPSS-AAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        MNQ+SKRSNP PLMVKPESEDRK SS AAA  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAE IKKEFD+RHGPTWHCIVGRNF
Subjt:  MNQDSKRSNPGPLMVKPESEDRKPSS-AAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF

A0A6J1I9I2 Dynein light chain2.7e-3890.43Show/hide
Query:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFDDAL
        MN DSKRSNP  LMVKPESEDRKPSSAA VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNF  A+
Subjt:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFDDAL

A0A6J1IC60 Dynein light chain7.8e-3893.33Show/hide
Query:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        MN DSKRSNP  LMVKPESEDRKPSSAA VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHC++GRNF
Subjt:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF

A0A6J1IQ69 Dynein light chain5.0e-3791.11Show/hide
Query:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        MNQ+SKRSNP PLMVKPESEDRK SS AA  KKIVIKSADMFG MQKEAVDIAIAAFEKHSVEKDVAEQIKKEFD+RHGPTWHCIVGRNF
Subjt:  MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF

SwissProt top hitse value%identityAlignment
Q22799 Dynein light chain 1, cytoplasmic5.6e-1763.93Show/hide
Query:  VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        V +K VIK+ADM  DMQ++A+D A  A EK+++EKD+A  IKKEFDK++ PTWHCIVGRNF
Subjt:  VGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF

Q3MHR3 Dynein light chain 2, cytoplasmic1.2e-1666.1Show/hide
Query:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        +K VIK+ADM  DMQ++AVD A  A EK+++EKD+A  IKKEFDK++ PTWHCIVGRNF
Subjt:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF

Q78P75 Dynein light chain 2, cytoplasmic1.2e-1666.1Show/hide
Query:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        +K VIK+ADM  DMQ++AVD A  A EK+++EKD+A  IKKEFDK++ PTWHCIVGRNF
Subjt:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF

Q96FJ2 Dynein light chain 2, cytoplasmic1.2e-1666.1Show/hide
Query:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        +K VIK+ADM  DMQ++AVD A  A EK+++EKD+A  IKKEFDK++ PTWHCIVGRNF
Subjt:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF

Q9D0M5 Dynein light chain 2, cytoplasmic1.2e-1666.1Show/hide
Query:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        +K VIK+ADM  DMQ++AVD A  A EK+++EKD+A  IKKEFDK++ PTWHCIVGRNF
Subjt:  KKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 115.9e-0641.67Show/hide
Query:  KIVIKSADMFGDMQKEAVDIAIAAFEKHSVE--KDVAEQIKKEFDKRHGPTWHCIVGRNF
        K +++ +DM   MQ +A+  A  A +   V   K +A  IKKEFD+R+G  W C+VG NF
Subjt:  KIVIKSADMFGDMQKEAVDIAIAAFEKHSVE--KDVAEQIKKEFDKRHGPTWHCIVGRNF

AT3G16120.1 Dynein light chain type 1 family protein2.9e-0540Show/hide
Query:  KIVIKSADMFGDMQKEAVDIAIAAFEKHSV--EKDVAEQIKKEFDKRHGPTWHCIVGRNF
        K  ++  DM   MQ +A+ IA  + +   V     +A  IKKEFD+R+G  W C+VG NF
Subjt:  KIVIKSADMFGDMQKEAVDIAIAAFEKHSV--EKDVAEQIKKEFDKRHGPTWHCIVGRNF

AT4G15930.1 Dynein light chain type 1 family protein2.0e-2260Show/hide
Query:  KRSNPGPLMVKPESEDRKPS-----SAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        K+S  G    +   +DR+ S     ++   GK+ VIKSADM  DMQKEA++IAI+AFEK+SVEKD+AE IKKEFDK+HG TWHCIVGRNF
Subjt:  KRSNPGPLMVKPESEDRKPS-----SAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF

AT4G27360.1 Dynein light chain type 1 family protein1.5e-0438.33Show/hide
Query:  KIVIKSADMFGDMQKEAVDIAIAAFEKHSVEK--DVAEQIKKEFDKRHGPTWHCIVGRNF
        K V+   DM   M+++A+ +A  A +   V +   +A  IKKEFD+ +G  W CIVG +F
Subjt:  KIVIKSADMFGDMQKEAVDIAIAAFEKHSVEK--DVAEQIKKEFDKRHGPTWHCIVGRNF

AT5G20110.1 Dynein light chain type 1 family protein9.2e-0747.76Show/hide
Query:  AAAVGKKIVIKSADMFGDMQKEAVDIA---IAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF
        AAA    + I +ADM G MQ  A   A   + + EK S  K +A  +KKEFDK +GP WHCIVG +F
Subjt:  AAAVGKKIVIKSADMFGDMQKEAVDIA---IAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAAGATTCCAAGCGAAGCAATCCGGGACCTCTAATGGTGAAACCTGAATCTGAGGATCGCAAACCCTCGTCTGCCGCTGCCGTCGGCAAGAAAATCGTCATCAA
GAGCGCCGATATGTTCGGAGACATGCAGAAGGAGGCTGTTGACATTGCCATAGCGGCATTTGAGAAGCATTCCGTCGAGAAGGATGTTGCCGAGCAGATAAAGAAGGAGT
TCGATAAGAGGCATGGCCCGACCTGGCATTGCATCGTCGGTCGTAATTTTGATGATGCTTTGAGCTTAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAAGATTCCAAGCGAAGCAATCCGGGACCTCTAATGGTGAAACCTGAATCTGAGGATCGCAAACCCTCGTCTGCCGCTGCCGTCGGCAAGAAAATCGTCATCAA
GAGCGCCGATATGTTCGGAGACATGCAGAAGGAGGCTGTTGACATTGCCATAGCGGCATTTGAGAAGCATTCCGTCGAGAAGGATGTTGCCGAGCAGATAAAGAAGGAGT
TCGATAAGAGGCATGGCCCGACCTGGCATTGCATCGTCGGTCGTAATTTTGATGATGCTTTGAGCTTAAGTTGA
Protein sequenceShow/hide protein sequence
MNQDSKRSNPGPLMVKPESEDRKPSSAAAVGKKIVIKSADMFGDMQKEAVDIAIAAFEKHSVEKDVAEQIKKEFDKRHGPTWHCIVGRNFDDALSLS