CuGenDBv2

Gene ID	Spg031755
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	LYR motif-containing 5A
Genome location	scaffold11:36645649..36649600
RNA-Seq Expression	Spg031755
Synteny	Spg031755
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008011 - Complex 1 LYR protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_017975552.1 PREDICTED: uncharacterized protein LOC18603731 isoform X1 [Theobroma cacao]

7.5e-40

74.58

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Query:  LSGFLFSSAKRATKPSRGATGGVKRAEMPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLIN
        L   ++ ++K+ +K  +   G  ++ EMPSLQTALPPELANNVIRLYRECLRRAKYIGH+QHNT LVV MVRQQF+K+MHETDPEKIQKLKDDAARGLIN
Subjt:  LSGFLFSSAKRATKPSRGATGGVKRAEMPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLIN

Query:  HILYESERLSGRKFSQSS
        HILYESE++SGRKFS+SS
Subjt:  HILYESERLSGRKFSQSS

XP_022138283.1 uncharacterized protein LOC111009499 [Momordica charantia]

4.7e-42

98.9

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNT+LVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS

XP_022964695.1 uncharacterized protein LOC111464671 [Cucurbita moschata]

3.4e-40

94.51

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRAK+IGH+QHNTDLVVSMV+QQFRKNMHETDPEKIQKLKDDAARGLINHILYESERL+GRK SQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS

XP_022972196.1 uncharacterized protein LOC111470803 [Cucurbita maxima]

1.2e-40

95.6

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRAKYIGH+QHNTDLVVSMV+QQFRKNMHETDPEKIQKLKDDAARGLINHILYESERL+GRK SQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS

XP_038878962.1 uncharacterized protein LOC120071039 [Benincasa hispida]

1.5e-40

95.6

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNT+L+VSMVRQQFRKNM ETDPEKIQKLKDDAARGLINHILYESER+SGRKFSQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS

TrEMBL top hits

e value

%identity

Alignment

A0A5D2HD62 Uncharacterized protein

2.4e-39

88.42

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Query:  KRAEMPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS
        K+ +MPSLQTALPPELANNVIRLYRECLRRAKYIGH+QHNT LVV MVRQQF+K+MHETDPEKIQKLKDDAARGLINHILYESE+LSGRKF  SS
Subjt:  KRAEMPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS

A0A5J5WM40 Uncharacterized protein

2.4e-39

88.42

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Query:  KRAEMPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS
        K+ +MPSLQTALPPELANNVIRLYRECLRRAKYIGH+QHNT LVV MVRQQF+K+MHETDPEKIQKLKDDAARGLINHILYESE+LSGRKF  SS
Subjt:  KRAEMPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS

A0A6J1C9Q7 uncharacterized protein LOC111009499

2.3e-42

98.9

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNT+LVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS

A0A6J1HLJ6 uncharacterized protein LOC111464671

1.6e-40

94.51

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRAK+IGH+QHNTDLVVSMV+QQFRKNMHETDPEKIQKLKDDAARGLINHILYESERL+GRK SQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS

A0A6J1I5B4 uncharacterized protein LOC111470803

5.6e-41

95.6

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS
        MPSLQTALPPELANNVIRLYRECLRRAKYIGH+QHNTDLVVSMV+QQFRKNMHETDPEKIQKLKDDAARGLINHILYESERL+GRK SQSS
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G17300.1 unknown protein

1.7e-37

81.32

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Query:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS
        MPSLQT+LPPELANNV+RLYRECLRRAK+IG QQHNT+LVV MVRQQF+K+M+ETDPEKIQKLKDDAARGLINH+L+ES +L+G K SQ S
Subjt:  MPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS

AT3G17300.2 unknown protein

2.1e-19

77.59

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Query:  QHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS
        QHNT+LVV MVRQQF+K+M+ETDPEKIQKLKDDAARGLINH+L+ES +L+G K SQ S
Subjt:  QHNTDLVVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS

Sequences

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CDS sequence

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ATGCGCTCACCCCTTCTGATCGACTTCTCCCACTCTGAAACTCCAACCAACTCTTCAAATCAAATTCGGGAGCTTGGTTGTGTGCAGGTTCTTACAAGAATTCACGAGGG
CAGATTTTCTTCATCCTTCTCTCTTTCCGGTTTCCTTTTTTCCTCTGCCAAGCGCGCTACAAAGCCATCAAGAGGAGCCACAGGAGGTGTGAAAAGGGCGGAAATGCCAT
CTCTACAGACTGCTCTACCTCCTGAGCTTGCGAATAATGTCATTAGGCTTTACCGTGAGTGCCTTCGAAGAGCCAAGTATATTGGTCATCAGCAACATAACACCGATCTT
GTGGTTAGTATGGTGAGGCAACAATTTAGAAAGAACATGCATGAGACTGATCCAGAGAAAATTCAGAAGTTGAAAGATGATGCGGCAAGGGGACTCATAAACCATATTCT
ATACGAATCTGAGAGACTGTCAGGTCGAAAATTCAGCCAAAGTTCTTGA

mRNA sequence

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Protein sequence

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MRSPLLIDFSHSETPTNSSNQIRELGCVQVLTRIHEGRFSSSFSLSGFLFSSAKRATKPSRGATGGVKRAEMPSLQTALPPELANNVIRLYRECLRRAKYIGHQQHNTDL
VVSMVRQQFRKNMHETDPEKIQKLKDDAARGLINHILYESERLSGRKFSQSS

Spg031755 (gene) of Sponge gourd (cylindrica) v1 genome