; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031757 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031757
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCopper ion binding protein
Genome locationscaffold11:43830669..43831418
RNA-Seq ExpressionSpg031757
SyntenySpg031757
Gene Ontology termsGO:0005762 - mitochondrial large ribosomal subunit (cellular component)
InterPro domainsIPR039145 - 39S ribosomal protein L40, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147522.1 uncharacterized protein LOC111016425 [Momordica charantia]5.6e-7668.57Show/hide
Query:  MIRFAKLKSLSLTADSGAHQLLQRCW--------------------------------------------------------------PRDREREAEREK
        MIR  KLKS++  ADSG HQL+QRCW                                                              P+DREREAEREK
Subjt:  MIRFAKLKSLSLTADSGAHQLLQRCW--------------------------------------------------------------PRDREREAEREK

Query:  LGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPEHLK
        LGLISK+RQREIEMMKMDKSKLGISDSPSI+GT+GLDLISLGVVDADKIPKYELT EDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPEHLK
Subjt:  LGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPEHLK

Query:  AAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR
        AAA+VPDLTPFPPNRFMATLTPPIEGYIEKV EAARRSSGKEKLR
Subjt:  AAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR

XP_022924790.1 uncharacterized protein LOC111432182 [Cucurbita moschata]1.3e-7568.15Show/hide
Query:  MIRFAKLKSLSLTADSGAHQLLQRCW-----------------------------------------------------------------PRDREREAE
        MIRFAKLKSL  +ADSG++ LLQRCW                                                                 P+DREREAE
Subjt:  MIRFAKLKSLSLTADSGAHQLLQRCW-----------------------------------------------------------------PRDREREAE

Query:  REKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPE
        REKLGLISKERQREIEMMKMDKSKLG+SDSPSIIGTMGLDLI+LGVVDADKIPKYELT EDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPE
Subjt:  REKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPE

Query:  HLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR
        HLKAAALVPDLTPFP NRFMATLTPPIEGYIEK+ EAA+RSSGKEKLR
Subjt:  HLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR

XP_022980123.1 uncharacterized protein LOC111479606 [Cucurbita maxima]7.4e-7668.55Show/hide
Query:  MIRFAKLKSLSLTADSGAHQLLQRCW-----------------------------------------------------------------PRDREREAE
        MIRFAKLKSL  +ADSG+H LLQRCW                                                                 P+DREREAE
Subjt:  MIRFAKLKSLSLTADSGAHQLLQRCW-----------------------------------------------------------------PRDREREAE

Query:  REKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPE
        REKLGLISKERQREIEMMKMDKSKLG+SDSPSIIGTMGLDLI+LGVVDADKIPKYELT EDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPE
Subjt:  REKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPE

Query:  HLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR
        HLKAAALVPDLTPFP NRFMATLTPPIEGYIEKV EAA+ SSGKEKLR
Subjt:  HLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR

XP_023527048.1 uncharacterized protein LOC111790399 [Cucurbita pepo subsp. pepo]2.1e-7567.74Show/hide
Query:  MIRFAKLKSLSLTADSGAHQLLQRCW-----------------------------------------------------------------PRDREREAE
        MIRFAKLKSL  +ADSG+H LLQRCW                                                                 P+DREREAE
Subjt:  MIRFAKLKSLSLTADSGAHQLLQRCW-----------------------------------------------------------------PRDREREAE

Query:  REKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPE
        REKLGLISKERQREIEMMKMDKSKLG+SDSPSIIGTMGLDLI+LGVVDADKIPKYELT EDGRRLAKEYSRVLMRRHRARQAAESTLL+MKKDAIEALPE
Subjt:  REKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPE

Query:  HLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR
        HLKAAALVPDLTPFP NRFMATLTPPIEGYIEK+ E A+RSSGKEKLR
Subjt:  HLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR

XP_038906439.1 uncharacterized protein LOC120092349 [Benincasa hispida]8.1e-7567.61Show/hide
Query:  MIRFAKLKSLSLTADSGAHQLLQRCW----------------------------------------------------------------PRDREREAER
        MIRF K KSL+L+ADSG HQLLQRCW                                                                P+DREREAER
Subjt:  MIRFAKLKSLSLTADSGAHQLLQRCW----------------------------------------------------------------PRDREREAER

Query:  EKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPEH
        EKLGLISKERQREIEMMKMDKSKLG+SD+PSIIGT+GLDLISLG+VDADKIPKYELT EDGRRLAKEYSRVLMRRHRAR+AAESTLLQMKK+AIEALPEH
Subjt:  EKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPEH

Query:  LKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR
        LKAAALVPDLT FP NRFMATLTPPIEGYIEKV EAARRSSGKEKLR
Subjt:  LKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR

TrEMBL top hitse value%identityAlignment
A0A5D3D1D4 Copper ion binding isoform 25.9e-7164.78Show/hide
Query:  MIRFAKLKSLSLTADSGAHQLLQRCW----------------------------------------------------------------PRDREREAER
        MIRF K KSLSL ADS AHQLLQRCW                                                                 ++REREAER
Subjt:  MIRFAKLKSLSLTADSGAHQLLQRCW----------------------------------------------------------------PRDREREAER

Query:  EKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPEH
        EKLGL+SKERQREIEMMKMDKSKLGISDSPSIIGT GLDLISLGVVDADKIPKYELT EDGRRLAKEYSRVLMR+HRAR+AAESTLL+MKK+AIEALP+H
Subjt:  EKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPEH

Query:  LKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR
        LKAAALVPD+TPFP +RFMATLTPPIEGY+EK+ EAA+RSS KEKLR
Subjt:  LKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR

A0A6J1D2K4 uncharacterized protein LOC1110164252.7e-7668.57Show/hide
Query:  MIRFAKLKSLSLTADSGAHQLLQRCW--------------------------------------------------------------PRDREREAEREK
        MIR  KLKS++  ADSG HQL+QRCW                                                              P+DREREAEREK
Subjt:  MIRFAKLKSLSLTADSGAHQLLQRCW--------------------------------------------------------------PRDREREAEREK

Query:  LGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPEHLK
        LGLISK+RQREIEMMKMDKSKLGISDSPSI+GT+GLDLISLGVVDADKIPKYELT EDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPEHLK
Subjt:  LGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPEHLK

Query:  AAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR
        AAA+VPDLTPFPPNRFMATLTPPIEGYIEKV EAARRSSGKEKLR
Subjt:  AAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR

A0A6J1EG20 uncharacterized protein LOC1114321826.1e-7668.15Show/hide
Query:  MIRFAKLKSLSLTADSGAHQLLQRCW-----------------------------------------------------------------PRDREREAE
        MIRFAKLKSL  +ADSG++ LLQRCW                                                                 P+DREREAE
Subjt:  MIRFAKLKSLSLTADSGAHQLLQRCW-----------------------------------------------------------------PRDREREAE

Query:  REKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPE
        REKLGLISKERQREIEMMKMDKSKLG+SDSPSIIGTMGLDLI+LGVVDADKIPKYELT EDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPE
Subjt:  REKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPE

Query:  HLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR
        HLKAAALVPDLTPFP NRFMATLTPPIEGYIEK+ EAA+RSSGKEKLR
Subjt:  HLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR

A0A6J1IYC8 uncharacterized protein LOC1114796063.6e-7668.55Show/hide
Query:  MIRFAKLKSLSLTADSGAHQLLQRCW-----------------------------------------------------------------PRDREREAE
        MIRFAKLKSL  +ADSG+H LLQRCW                                                                 P+DREREAE
Subjt:  MIRFAKLKSLSLTADSGAHQLLQRCW-----------------------------------------------------------------PRDREREAE

Query:  REKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPE
        REKLGLISKERQREIEMMKMDKSKLG+SDSPSIIGTMGLDLI+LGVVDADKIPKYELT EDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPE
Subjt:  REKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPE

Query:  HLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR
        HLKAAALVPDLTPFP NRFMATLTPPIEGYIEKV EAA+ SSGKEKLR
Subjt:  HLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR

E5GCH1 Uncharacterized protein5.9e-7164.78Show/hide
Query:  MIRFAKLKSLSLTADSGAHQLLQRCW----------------------------------------------------------------PRDREREAER
        MIRF K KSLSL ADS AHQLLQRCW                                                                 ++REREAER
Subjt:  MIRFAKLKSLSLTADSGAHQLLQRCW----------------------------------------------------------------PRDREREAER

Query:  EKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPEH
        EKLGL+SKERQREIEMMKMDKSKLGISDSPSIIGT GLDLISLGVVDADKIPKYELT EDGRRLAKEYSRVLMR+HRAR+AAESTLL+MKK+AIEALP+H
Subjt:  EKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPEH

Query:  LKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR
        LKAAALVPD+TPFP +RFMATLTPPIEGY+EK+ EAA+RSS KEKLR
Subjt:  LKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G05400.1 copper ion binding1.4e-5368.35Show/hide
Query:  PRDREREAEREKLGLISKERQREIEMMKM-DKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQM
        P++ EREA+REKLGLISKE+QR++E+ K    + +G++D P  IGT GLD ISLG+ +A+++PKY+LTEEDG RLAKEYS+VLMR HR R+AAE+ LL +
Subjt:  PRDREREAEREKLGLISKERQREIEMMKM-DKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQM

Query:  KKDAIEALPEHLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR
        KK AIEALPE+LK AAL PDLTPFP NR MATLTPPIEGY+EKVM+AA++SS KEKLR
Subjt:  KKDAIEALPEHLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR

AT4G05400.2 copper ion binding1.4e-5368.35Show/hide
Query:  PRDREREAEREKLGLISKERQREIEMMKM-DKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQM
        P++ EREA+REKLGLISKE+QR++E+ K    + +G++D P  IGT GLD ISLG+ +A+++PKY+LTEEDG RLAKEYS+VLMR HR R+AAE+ LL +
Subjt:  PRDREREAEREKLGLISKERQREIEMMKM-DKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQM

Query:  KKDAIEALPEHLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR
        KK AIEALPE+LK AAL PDLTPFP NR MATLTPPIEGY+EKVM+AA++SS KEKLR
Subjt:  KKDAIEALPEHLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR

AT4G21140.1 BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2)9.1e-4864.78Show/hide
Query:  PRDREREAEREKLGLISKERQREIEMMKMDKS-KLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQM
        P++REREA REKLGLISK RQ+EI+  K   S  +G++ +P  IGT GLD ISLG+   D++PKY++T EDG RLAKEYSRVLMR HRAR+ AE +L++M
Subjt:  PRDREREAEREKLGLISKERQREIEMMKMDKS-KLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMRRHRARQAAESTLLQM

Query:  KKDAIEALPEHLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVME-AARRSSGKEKLR
        +  A+EALPE+LK AALV DLTPFP +R  ATLTPPIEGY+E++M  AAR+SSGKEKLR
Subjt:  KKDAIEALPEHLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVME-AARRSSGKEKLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCGTTTCGCGAAATTGAAATCTCTGTCCCTGACTGCAGATTCCGGCGCCCACCAATTGCTTCAAAGATGCTGGCCCAGAGATAGAGAACGCGAGGCGGAGCGGGA
GAAGCTGGGACTCATCAGCAAAGAGCGCCAGCGCGAGATTGAGATGATGAAGATGGATAAATCGAAATTGGGGATTTCTGATTCTCCGTCGATCATTGGAACTATGGGTT
TGGATCTGATATCACTGGGTGTGGTCGACGCGGATAAGATTCCGAAGTACGAATTGACAGAGGAAGATGGGCGGCGGCTTGCGAAGGAGTACAGTCGGGTGTTGATGAGG
CGGCACCGTGCGAGACAGGCAGCTGAATCGACGCTGTTGCAGATGAAGAAAGATGCCATTGAAGCATTGCCAGAGCATTTGAAAGCTGCTGCTTTGGTCCCAGATTTGAC
TCCGTTCCCACCGAACCGGTTCATGGCGACTTTGACGCCTCCAATTGAAGGCTACATTGAAAAGGTCATGGAAGCAGCCAGGAGGAGTAGCGGGAAAGAGAAGCTTAGAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGATCCGTTTCGCGAAATTGAAATCTCTGTCCCTGACTGCAGATTCCGGCGCCCACCAATTGCTTCAAAGATGCTGGCCCAGAGATAGAGAACGCGAGGCGGAGCGGGA
GAAGCTGGGACTCATCAGCAAAGAGCGCCAGCGCGAGATTGAGATGATGAAGATGGATAAATCGAAATTGGGGATTTCTGATTCTCCGTCGATCATTGGAACTATGGGTT
TGGATCTGATATCACTGGGTGTGGTCGACGCGGATAAGATTCCGAAGTACGAATTGACAGAGGAAGATGGGCGGCGGCTTGCGAAGGAGTACAGTCGGGTGTTGATGAGG
CGGCACCGTGCGAGACAGGCAGCTGAATCGACGCTGTTGCAGATGAAGAAAGATGCCATTGAAGCATTGCCAGAGCATTTGAAAGCTGCTGCTTTGGTCCCAGATTTGAC
TCCGTTCCCACCGAACCGGTTCATGGCGACTTTGACGCCTCCAATTGAAGGCTACATTGAAAAGGTCATGGAAGCAGCCAGGAGGAGTAGCGGGAAAGAGAAGCTTAGAT
GA
Protein sequenceShow/hide protein sequence
MIRFAKLKSLSLTADSGAHQLLQRCWPRDREREAEREKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTEEDGRRLAKEYSRVLMR
RHRARQAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPPNRFMATLTPPIEGYIEKVMEAARRSSGKEKLR