; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031758 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031758
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWIB domain-containing protein
Genome locationscaffold11:42488002..42490329
RNA-Seq ExpressionSpg031758
SyntenySpg031758
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582547.1 hypothetical protein SDJN03_22549, partial [Cucurbita argyrosperma subsp. sororia]3.4e-5881.05Show/hide
Query:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAV
        MSSGFSNGIRVFRGCR+LLAP KSSA VP  +  + + SK+ ++ KEK P  SD AAAAAPKPK +REMTRPTG+LKV QVSPAL NFLGVSEASRTDAV
Subjt:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAV

Query:  KQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN
        KQIWSYIKLHNLQNP+NKREI+CDDKLKAIFEGREKVGFLEIGKLL RHFVKN
Subjt:  KQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN

XP_022146901.1 upstream activation factor subunit spp27-like [Momordica charantia]7.8e-6387.9Show/hide
Query:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTT----SKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASR
        MSSG SNGIRVFRGCRALLAPSKSSA+VPAA   AA+KSK T    S+SKEK  PSSDTAAAAAPKPK+KREMTRP GILKVAQVSPAL NFLGV EASR
Subjt:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTT----SKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASR

Query:  TDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN
        TDAVKQIWSYIKLHNLQNPANKREI+CDDKLKAIFEGREKVGFLEIGKLLARHFVKN
Subjt:  TDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN

XP_022924718.1 upstream activation factor subunit spp27-like [Cucurbita moschata]2.0e-5881.05Show/hide
Query:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAV
        MSSGFSNGIRVFRGC +LLAP KSSA VP  +  + + SK+ ++ KEK PP SD AAAAAPKPK +REMTRPTG+LKV QVSPAL NFLGVSEASRTDAV
Subjt:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAV

Query:  KQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN
        KQIWSYIKLHNLQNP+NKREI+CDDKLKAIFEGREKVGFLEIGKLL RHFVKN
Subjt:  KQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN

XP_022980440.1 protein TRI1-like [Cucurbita maxima]3.3e-6184.97Show/hide
Query:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAV
        MSSGFSNGIRVFRGCRALLAPSKSSA VP A+  + + SK+ ++ KEK PP SD AAAAAPKPKVKREMTR TG LKV QVSPAL NFLGVSEASRTDAV
Subjt:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAV

Query:  KQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN
        KQIWSYIKLHNLQNPANKREI+CDDKLKAIFEGREKVGFLEIGKLL RHFVKN
Subjt:  KQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN

XP_038877222.1 upstream activation factor subunit UAF30 [Benincasa hispida]2.6e-5882.47Show/hide
Query:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTA-AAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDA
        MSSGFSNGIRVFR CRALLAPSKSSA V A +  + + SK   KSK K PP+SDTA  +A PKPK+KRE+TRPTGILKV QVSPALSNFLGVSEASR DA
Subjt:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTA-AAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDA

Query:  VKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN
        VKQIWSYIKLHNLQNPANKREI+CDDKLKAIFEGREKVGFLEIGKLLA HFVKN
Subjt:  VKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN

TrEMBL top hitse value%identityAlignment
A0A6J1D0R8 upstream activation factor subunit spp27-like3.8e-6387.9Show/hide
Query:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTT----SKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASR
        MSSG SNGIRVFRGCRALLAPSKSSA+VPAA   AA+KSK T    S+SKEK  PSSDTAAAAAPKPK+KREMTRP GILKVAQVSPAL NFLGV EASR
Subjt:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTT----SKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASR

Query:  TDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN
        TDAVKQIWSYIKLHNLQNPANKREI+CDDKLKAIFEGREKVGFLEIGKLLARHFVKN
Subjt:  TDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN

A0A6J1EDA2 upstream activation factor subunit spp27-like9.6e-5981.05Show/hide
Query:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAV
        MSSGFSNGIRVFRGC +LLAP KSSA VP  +  + + SK+ ++ KEK PP SD AAAAAPKPK +REMTRPTG+LKV QVSPAL NFLGVSEASRTDAV
Subjt:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAV

Query:  KQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN
        KQIWSYIKLHNLQNP+NKREI+CDDKLKAIFEGREKVGFLEIGKLL RHFVKN
Subjt:  KQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN

A0A6J1GFF6 upstream activation factor subunit UAF30-like1.3e-5581.17Show/hide
Query:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSS-DTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDA
        MSSGFSNGIRVFRGCRALLAPSKSSAAVPAA            KSKEKAPPSS D  +AAAPKPK+KR  TR TGILKV +VSPALSNFLGVSE SRT+A
Subjt:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSS-DTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDA

Query:  VKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN
        VKQIWSYIKL+NLQNPANKREIFCDDKLKAIFEGREKVGFLEI KLL  HFVK+
Subjt:  VKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN

A0A6J1IKQ4 protein TRI1-like4.5e-5681.82Show/hide
Query:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSS-DTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDA
        MSSGFSNGIRVFRGC ALLAPSKSSAAVP     A+ KSK TSKSKEKAPPSS D  +AAAPKP +KR  TR TGILKV +VSPALSNFLGVSE SRT+A
Subjt:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSS-DTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDA

Query:  VKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN
        VKQIWSYIKL+NLQNPANKREIFCDDKLKAIFEGREKVGFLEI K L+ HFVK+
Subjt:  VKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN

A0A6J1IWB1 protein TRI1-like1.6e-6184.97Show/hide
Query:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAV
        MSSGFSNGIRVFRGCRALLAPSKSSA VP A+  + + SK+ ++ KEK PP SD AAAAAPKPKVKREMTR TG LKV QVSPAL NFLGVSEASRTDAV
Subjt:  MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAV

Query:  KQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN
        KQIWSYIKLHNLQNPANKREI+CDDKLKAIFEGREKVGFLEIGKLL RHFVKN
Subjt:  KQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp277.5e-0838.14Show/hide
Query:  APS-KSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAA---AAPKPKVKREMTRPTGIL-KVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQN
        APS K S    A +     K  T + ++E   P+  T           K KR        L K  ++SP L+ FLG+ + SR   VK++W YIK H+LQ+
Subjt:  APS-KSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAA---AAPKPKVKREMTRPTGIL-KVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQN

Query:  PANKREIFCDDKLKAIFE
        P +KR I CDDKLK++FE
Subjt:  PANKREIFCDDKLKAIFE

Q05024 Protein TRI14.7e-1037.5Show/hide
Query:  KSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKV
        KS++ SK K+K   S D+ + +  K                  +S  L  FLG  E  RT  VK IW YIK H+LQNP ++REI CD+K++ IF   +K+
Subjt:  KSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKV

Query:  GFLEIGKLLARH
            + KLL +H
Subjt:  GFLEIGKLLARH

Q08747 Upstream activation factor subunit UAF301.0e-0933.62Show/hide
Query:  SKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREK
        +K  T SK +      +D+        K K  +++     +   +S +L++ LG  E +RT+ V+++W+YIK HNLQNP NK+EI CD+KL+ I    + 
Subjt:  SKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREK

Query:  VGFLEIGKLLARHFVK
            E+ K+LA H  +
Subjt:  VGFLEIGKLLARHFVK

Q2TBN1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 12.0e-0534.33Show/hide
Query:  QVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLL
        ++ P L+  LG+   +R   ++ +W YIK H LQ+P  +  + CD  L+ IFE  +++ F EI + L
Subjt:  QVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLL

Q9P7S3 SWI/SNF and RSC complexes subunit ssr31.7e-0740.58Show/hide
Query:  QVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLAR
        ++S A +N LG+ E +R D V  +W YIK H LQ+   KR I CD  L+ +FE  +++ F  I +L+ R
Subjt:  QVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLAR

Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein1.4e-2258.75Show/hide
Query:  GILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN
        GI K   VS  L++F G  E +R  A+K++W Y+KLHNLQNPANK+EI CDDKLK IF+G++KVG  EI KLL+ HF K+
Subjt:  GILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN

AT2G14880.1 SWIB/MDM2 domain superfamily protein5.5e-2250.52Show/hide
Query:  TAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFV
        T+A  + +P    +   P GI+K   VSP + + + + E +RT A+K+IW+YIK H+LQ+P NKREI CD+KLK IFEGR++VGFLEI KL+  HF+
Subjt:  TAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFV

AT2G35605.1 SWIB/MDM2 domain superfamily protein2.8e-2666.67Show/hide
Query:  TGILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN
        TGILKV  VS  L+NF+G +E SRT AVK+IW YIKL+NLQNP NKREI CD++LK IF G++ VGFLEI KLL++HF K+
Subjt:  TGILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN

AT3G03590.1 SWIB/MDM2 domain superfamily protein1.5e-3254.55Show/hide
Query:  VFRGCRALLAP-SKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKL
        VFRG R+LLAP S++++++ +A  T    +K  +K+K K    SD+ A   P         R TGI KV  VSP L+ FLG  E SRTDA+K IW+YIK 
Subjt:  VFRGCRALLAP-SKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKL

Query:  HNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVK
        H+LQNPA+KREIFCD+ LK IFEG++KVGFLEI KLL+ HFVK
Subjt:  HNLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVK

AT4G34290.1 SWIB/MDM2 domain superfamily protein9.3e-2246.97Show/hide
Query:  APSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKR
        AP +SS   P  S    S +  T+    +A  S   AAAA+  P    +   P GI+K   VS A+ + +GV E  RT A+K+IW+YIK H+LQ+P NKR
Subjt:  APSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLHNLQNPANKR

Query:  EIFCDDKLKAIFEGREKVGFLEIGKLLARHFV
        +I CD+KLK IFEG+E+VGFLEI KL+  HF+
Subjt:  EIFCDDKLKAIFEGREKVGFLEIGKLLARHFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCTGGATTCAGCAATGGCATTAGGGTTTTCAGAGGCTGTAGAGCTCTATTAGCTCCGTCGAAATCCTCAGCAGCCGTTCCCGCCGCTTCCGGTACTGCGGCATC
CAAATCGAAGACGACCTCGAAATCGAAGGAGAAGGCTCCACCGAGCTCCGATACTGCTGCTGCAGCCGCGCCCAAGCCGAAAGTCAAAAGGGAAATGACTCGACCGACGG
GGATTTTGAAGGTCGCCCAGGTTTCTCCGGCGTTGAGCAACTTCTTGGGAGTATCGGAGGCTTCTCGCACCGACGCCGTCAAGCAGATCTGGTCCTACATCAAGCTCCAT
AACCTTCAGAATCCTGCTAACAAAAGAGAGATCTTCTGCGACGATAAACTCAAAGCCATATTTGAAGGAAGGGAAAAGGTCGGTTTCTTAGAGATTGGAAAATTGCTCGC
TCGCCATTTCGTGAAGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCTGGATTCAGCAATGGCATTAGGGTTTTCAGAGGCTGTAGAGCTCTATTAGCTCCGTCGAAATCCTCAGCAGCCGTTCCCGCCGCTTCCGGTACTGCGGCATC
CAAATCGAAGACGACCTCGAAATCGAAGGAGAAGGCTCCACCGAGCTCCGATACTGCTGCTGCAGCCGCGCCCAAGCCGAAAGTCAAAAGGGAAATGACTCGACCGACGG
GGATTTTGAAGGTCGCCCAGGTTTCTCCGGCGTTGAGCAACTTCTTGGGAGTATCGGAGGCTTCTCGCACCGACGCCGTCAAGCAGATCTGGTCCTACATCAAGCTCCAT
AACCTTCAGAATCCTGCTAACAAAAGAGAGATCTTCTGCGACGATAAACTCAAAGCCATATTTGAAGGAAGGGAAAAGGTCGGTTTCTTAGAGATTGGAAAATTGCTCGC
TCGCCATTTCGTGAAGAACTGA
Protein sequenceShow/hide protein sequence
MSSGFSNGIRVFRGCRALLAPSKSSAAVPAASGTAASKSKTTSKSKEKAPPSSDTAAAAAPKPKVKREMTRPTGILKVAQVSPALSNFLGVSEASRTDAVKQIWSYIKLH
NLQNPANKREIFCDDKLKAIFEGREKVGFLEIGKLLARHFVKN