; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031785 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031785
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAlba domain-containing protein
Genome locationscaffold11:40018453..40021600
RNA-Seq ExpressionSpg031785
SyntenySpg031785
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018769.1 hypothetical protein SDJN02_20642 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-6089.4Show/hide
Query:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGM--AIPTVVTIAEILKK
        MESGMVVSE  +EVKNEIR NE+EKLLVVAPDGEVKEIAVLTE KKK+NQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGM   IPTVVTIAEILKK
Subjt:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGM--AIPTVVTIAEILKK

Query:  NGLAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED
        NGLAFQK LTISSVSLKNGENDRLVMKPKIEIAL+ AEK+K I+TATTSED
Subjt:  NGLAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED

XP_022147424.1 uncharacterized protein At2g34160-like [Momordica charantia]1.4e-6191.33Show/hide
Query:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
        MES +VVSE  TEVK+EIR NE+EKLLVVAPDG+VKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
Subjt:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG

Query:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSEDC
        LA +KNLTISSVSLKNGENDRLVMKPKIEIALV AEK KNI TATTSEDC
Subjt:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSEDC

XP_022924600.1 uncharacterized protein At2g34160-like [Cucurbita moschata]2.9e-6290.6Show/hide
Query:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
        MESGMVVSE  +E+KNEIR NE+EKLLVVAPDGEVKEIAVLTE KKK+NQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
Subjt:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG

Query:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED
        LAFQK LTISSVSLKNGENDRLVMKPKIEIAL+ AEK+K I+TATTSED
Subjt:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED

XP_022980835.1 uncharacterized protein At2g34160-like [Cucurbita maxima]2.9e-6291.28Show/hide
Query:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
        MESGMVVSE T+EVKNEIR NE+EKLLVVAPD EVKEIAVLTE KKK+NQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
Subjt:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG

Query:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED
        LAFQK LTISSVSLKNGENDRLVMKPKIEIAL+ AEK+K I+TATTSED
Subjt:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED

XP_038877187.1 uncharacterized protein At2g34160-like [Benincasa hispida]1.4e-6190.6Show/hide
Query:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
        MESGMVVSEGT EVKNEIR +E+EKLLVVA DGEVKEIAVLTEFKKK+NQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NG
Subjt:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG

Query:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED
        LAFQK LTISSVSLK GEND+LVMKPKIEIALV AEKIKNI+TA TSED
Subjt:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED

TrEMBL top hitse value%identityAlignment
A0A1S3AXD3 uncharacterized protein At2g34160-like1.0e-6088.59Show/hide
Query:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
        M+SG VVSE T EVKNEI+ NE+EKLLV APD EVKEIAVLTEFKKK+NQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NG
Subjt:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG

Query:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED
        LAFQKNLTISSVSLKNGEN +LVMKPKIEIALV AEKIKNI+TA TSED
Subjt:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED

A0A5D3CZ81 Alba DNA/RNA-binding protein1.0e-6088.59Show/hide
Query:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
        M+SG VVSE T EVKNEI+ NE+EKLLV APD EVKEIAVLTEFKKK+NQIQVSNVKKPFFYYYNLSKR+IKQYNEVELSALGMAIPTVVTIAEILK+NG
Subjt:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG

Query:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED
        LAFQKNLTISSVSLKNGEN +LVMKPKIEIALV AEKIKNI+TA TSED
Subjt:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED

A0A6J1D0Y9 uncharacterized protein At2g34160-like7.0e-6291.33Show/hide
Query:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
        MES +VVSE  TEVK+EIR NE+EKLLVVAPDG+VKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
Subjt:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG

Query:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSEDC
        LA +KNLTISSVSLKNGENDRLVMKPKIEIALV AEK KNI TATTSEDC
Subjt:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSEDC

A0A6J1EFH1 uncharacterized protein At2g34160-like1.4e-6290.6Show/hide
Query:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
        MESGMVVSE  +E+KNEIR NE+EKLLVVAPDGEVKEIAVLTE KKK+NQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
Subjt:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG

Query:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED
        LAFQK LTISSVSLKNGENDRLVMKPKIEIAL+ AEK+K I+TATTSED
Subjt:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED

A0A6J1IXN8 uncharacterized protein At2g34160-like1.4e-6291.28Show/hide
Query:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
        MESGMVVSE T+EVKNEIR NE+EKLLVVAPD EVKEIAVLTE KKK+NQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG
Subjt:  MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNG

Query:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED
        LAFQK LTISSVSLKNGENDRLVMKPKIEIAL+ AEK+K I+TATTSED
Subjt:  LAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSED

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341603.3e-2457.28Show/hide
Query:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTAT
        +KKN+IQVSN KKP F+Y NL+KRY++QYN+VELSALGMAI TVVT+ EILK NG A +K +  S+V +K+    R V K KIEI LV +EK   +  A 
Subjt:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTAT

Query:  TSE
          E
Subjt:  TSE

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein8.8e-2556.31Show/hide
Query:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTAT
        +KKN+IQVSN KKP F+Y NL+KRY++QY +VELSALGMAI TVVT+AEILK NG A +K +  S+V +K+    R V K KIEI L  +EK   +  A 
Subjt:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTAT

Query:  TSE
          E
Subjt:  TSE

AT2G34160.1 Alba DNA/RNA-binding protein2.3e-2557.28Show/hide
Query:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTAT
        +KKN+IQVSN KKP F+Y NL+KRY++QYN+VELSALGMAI TVVT+ EILK NG A +K +  S+V +K+    R V K KIEI LV +EK   +  A 
Subjt:  KKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGENDRLVMKPKIEIALVIAEKIKNITTAT

Query:  TSE
          E
Subjt:  TSE

AT3G04620.1 Alba DNA/RNA-binding protein5.2e-2551.61Show/hide
Query:  EKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGENDRLV
        E+ +V+AP        V T    KKN+IQVSN KKP F+Y NL+KRYI+Q+NEVELSALGMAI TVVTI+EILK NGLA +K +  S+V +K+    ++V
Subjt:  EKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTISSVSLKNGENDRLV

Query:  MKPKIEIALVIAEKIKNITTATTS
         K KIEI L  ++K  ++    T+
Subjt:  MKPKIEIALVIAEKIKNITTATTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCCGGCATGGTCGTCTCAGAAGGCACCACTGAGGTCAAGAATGAAATCCGCGATAACGAGGATGAAAAGCTCCTCGTCGTTGCCCCCGATGGTGAGGTTAAGGA
GATTGCTGTTCTGACCGAGTTTAAGAAGAAGAAGAACCAAATTCAGGTTTCCAATGTCAAGAAGCCATTCTTCTACTACTACAATCTTTCTAAGAGGTACATTAAGCAGT
ACAACGAAGTTGAGCTCTCTGCCTTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAAGAATGGATTGGCATTTCAAAAGAACTTGACGATATCT
TCTGTCAGTTTGAAGAATGGGGAAAATGACAGGCTGGTTATGAAACCTAAGATTGAGATTGCACTGGTAATTGCAGAGAAGATCAAGAACATTACGACTGCTACAACAAG
TGAAGATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCCGGCATGGTCGTCTCAGAAGGCACCACTGAGGTCAAGAATGAAATCCGCGATAACGAGGATGAAAAGCTCCTCGTCGTTGCCCCCGATGGTGAGGTTAAGGA
GATTGCTGTTCTGACCGAGTTTAAGAAGAAGAAGAACCAAATTCAGGTTTCCAATGTCAAGAAGCCATTCTTCTACTACTACAATCTTTCTAAGAGGTACATTAAGCAGT
ACAACGAAGTTGAGCTCTCTGCCTTAGGAATGGCTATACCTACTGTAGTGACGATCGCCGAGATTCTGAAGAAGAATGGATTGGCATTTCAAAAGAACTTGACGATATCT
TCTGTCAGTTTGAAGAATGGGGAAAATGACAGGCTGGTTATGAAACCTAAGATTGAGATTGCACTGGTAATTGCAGAGAAGATCAAGAACATTACGACTGCTACAACAAG
TGAAGATTGTTGA
Protein sequenceShow/hide protein sequence
MESGMVVSEGTTEVKNEIRDNEDEKLLVVAPDGEVKEIAVLTEFKKKKNQIQVSNVKKPFFYYYNLSKRYIKQYNEVELSALGMAIPTVVTIAEILKKNGLAFQKNLTIS
SVSLKNGENDRLVMKPKIEIALVIAEKIKNITTATTSEDC