; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031813 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031813
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL28
Genome locationscaffold11:38563593..38569219
RNA-Seq ExpressionSpg031813
SyntenySpg031813
Gene Ontology termsGO:0007283 - spermatogenesis (biological process)
GO:0009987 - cellular process (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR000221 - Protamine P1
IPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018652.1 Serine/arginine-rich SC35-like splicing factor SCL28 [Cucurbita argyrosperma subsp. argyrosperma]7.3e-6769.91Show/hide
Query:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT----GVSTPENRV
        MARYRSRSRSYSPRRRSR+PPRGRKRYDD+PR+RYRESRS+RDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT    G    + R 
Subjt:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT----GVSTPENRV

Query:  AGATEGVLQE------GLRDGGIVLTHAHLHLPGMIQEVKH--------------WNRGARDEYLSPARSRSISRSRSPRDRRDYSRSPSPKENGRSPRD
        A       Q+      G R+  IV    +   P  ++  K                +RGARDEYLSPARSRSISRS SPRDRRDYSRSP+PKENGRSPR 
Subjt:  AGATEGVLQE------GLRDGGIVLTHAHLHLPGMIQEVKH--------------WNRGARDEYLSPARSRSISRSRSPRDRRDYSRSPSPKENGRSPRD

Query:  VDIARSRSRSPRAVSRSPSGSRSRSY
        VDIARSRSRSPRA SRSPSGSRSRSY
Subjt:  VDIARSRSRSPRAVSRSPSGSRSRSY

XP_022137875.1 serine/arginine-rich SC35-like splicing factor SCL28 [Momordica charantia]6.4e-6364.08Show/hide
Query:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT----GVSTPENRV
        MARYRSRSRSYSPRRRSRSPPRGRKRYDD+PR+RY ESRSYRDRRSPAPSGLLVRNLPLDARPEDLR PFERFGPVKDVYLPKNYYT    G    + R 
Subjt:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT----GVSTPENRV

Query:  AGATEGVLQE------GLRDGGIVLTHAHLHLPGMIQ-------------------------------EVKH--WNRGARDEYLSPARSRSISRSRSPRD
        A       Q+      G R+  IV    +   P  ++                                 +H   NRGARDEYLSPARSRSISRSRSP D
Subjt:  AGATEGVLQE------GLRDGGIVLTHAHLHLPGMIQ-------------------------------EVKH--WNRGARDEYLSPARSRSISRSRSPRD

Query:  RRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY
        RRDYSRSPSPKENGRSPR+VDI RSRSRS RA SRSPSGSRS+SY
Subjt:  RRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY

XP_022955785.1 serine/arginine-rich SC35-like splicing factor SCL28 [Cucurbita moschata]1.3e-6363.01Show/hide
Query:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG------------
        MA+YRSRSRSYSPRRRSR+PPRGRKRYDD+PR+RYRESRS+RDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG            
Subjt:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG------------

Query:  ---------------VSTPENRVAGATEG-----VLQEGLRDGGIVLT------------HAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPR
                       +   E R+  A E       ++   R  G                H++   P   +     +RGARDEYLSPARSRSISRS SPR
Subjt:  ---------------VSTPENRVAGATEG-----VLQEGLRDGGIVLT------------HAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPR

Query:  DRRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY
        DRRDYSRSP+PKENGRSPR VD ARSRSRSPRA SRSPSGSRSRSY
Subjt:  DRRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY

XP_022979912.1 serine/arginine-rich SC35-like splicing factor SCL28 [Cucurbita maxima]1.5e-6463.82Show/hide
Query:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG------------
        MARYRSRSRSYSPRRRSR+PPRGRKRYDD+PR+RYRESRS+RDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG            
Subjt:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG------------

Query:  ---------------VSTPENRVAGATEG-----VLQEGLRDGGIVLT------------HAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPR
                       +   E R+  A E       ++   R  G                H++   P   +     +RGARDEYLSPARSRSISRS SPR
Subjt:  ---------------VSTPENRVAGATEG-----VLQEGLRDGGIVLT------------HAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPR

Query:  DRRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY
        DRRDYSRSP+PKENGRSPR VDIARSRSRSPRA SRSPSGSRSRSY
Subjt:  DRRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY

XP_023527505.1 serine/arginine-rich SC35-like splicing factor SCL28 [Cucurbita pepo subsp. pepo]4.4e-6463.41Show/hide
Query:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG------------
        MARYRSRSRSYSPRRRSR+PPRGRKRYDD+PR+RYRESRS+RDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG            
Subjt:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG------------

Query:  ---------------VSTPENRVAGATEG-----VLQEGLRDGGIVLT------------HAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPR
                       +   E R+  A E       ++   R  G                H++   P   +     +RGARDEYLSPARSRSISRS SPR
Subjt:  ---------------VSTPENRVAGATEG-----VLQEGLRDGGIVLT------------HAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPR

Query:  DRRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY
        DRRDYSRSP+PKENGRSPR VDIARSRSRSPRA SRSPSGSRSRS+
Subjt:  DRRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY

TrEMBL top hitse value%identityAlignment
A0A1S3AXW0 serine/arginine-rich SC35-like splicing factor SCL282.6e-6262.45Show/hide
Query:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT----GVSTPENRV
        MARYRSRSRSYSPRRRSR+PPRGRKRYDD+PR+RYRESRS+RDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT    G    + R 
Subjt:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT----GVSTPENRV

Query:  AGATEGVLQE------GLRDGGIVLTHAHLHLPGMIQ-------------------------------EVKH--WNRGARDEYLSPARSRSISRSRSPRD
        A       Q+      G R+  IV    +   P  ++                                 +H   +RGARDEYLSPARSRSIS SRSPRD
Subjt:  AGATEGVLQE------GLRDGGIVLTHAHLHLPGMIQ-------------------------------EVKH--WNRGARDEYLSPARSRSISRSRSPRD

Query:  RRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY
        R+DYSRSP+PK+NGRSPR+VD ARSRSRSP+  SRSPSGSRSRSY
Subjt:  RRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY

A0A5D3CXM8 Serine/arginine-rich SC35-like splicing factor SCL286.9e-6362.6Show/hide
Query:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT----GVSTPENRV
        MARYRSRSRSYSPRRRSR+PPRGRKRYDD+PR+RYRESRS+RDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT    G    + R 
Subjt:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT----GVSTPENRV

Query:  AGATEGVLQE------GLRDGGIVLTHAHLHLPGMIQ-------------------------------EVKH--WNRGARDEYLSPARSRSISRSRSPRD
        A       Q+      G R+  IV    +   P  ++                                 +H   +RGARDEYLSPARSRSIS SRSPRD
Subjt:  AGATEGVLQE------GLRDGGIVLTHAHLHLPGMIQ-------------------------------EVKH--WNRGARDEYLSPARSRSISRSRSPRD

Query:  RRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSYR
        R+DYSRSP+PK+NGRSPR+VD ARSRSRSP+  SRSPSGSRSRSYR
Subjt:  RRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSYR

A0A6J1C7W4 serine/arginine-rich SC35-like splicing factor SCL283.1e-6364.08Show/hide
Query:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT----GVSTPENRV
        MARYRSRSRSYSPRRRSRSPPRGRKRYDD+PR+RY ESRSYRDRRSPAPSGLLVRNLPLDARPEDLR PFERFGPVKDVYLPKNYYT    G    + R 
Subjt:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT----GVSTPENRV

Query:  AGATEGVLQE------GLRDGGIVLTHAHLHLPGMIQ-------------------------------EVKH--WNRGARDEYLSPARSRSISRSRSPRD
        A       Q+      G R+  IV    +   P  ++                                 +H   NRGARDEYLSPARSRSISRSRSP D
Subjt:  AGATEGVLQE------GLRDGGIVLTHAHLHLPGMIQ-------------------------------EVKH--WNRGARDEYLSPARSRSISRSRSPRD

Query:  RRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY
        RRDYSRSPSPKENGRSPR+VDI RSRSRS RA SRSPSGSRS+SY
Subjt:  RRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY

A0A6J1GW11 serine/arginine-rich SC35-like splicing factor SCL286.2e-6463.01Show/hide
Query:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG------------
        MA+YRSRSRSYSPRRRSR+PPRGRKRYDD+PR+RYRESRS+RDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG            
Subjt:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG------------

Query:  ---------------VSTPENRVAGATEG-----VLQEGLRDGGIVLT------------HAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPR
                       +   E R+  A E       ++   R  G                H++   P   +     +RGARDEYLSPARSRSISRS SPR
Subjt:  ---------------VSTPENRVAGATEG-----VLQEGLRDGGIVLT------------HAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPR

Query:  DRRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY
        DRRDYSRSP+PKENGRSPR VD ARSRSRSPRA SRSPSGSRSRSY
Subjt:  DRRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY

A0A6J1IQ05 serine/arginine-rich SC35-like splicing factor SCL287.4e-6563.82Show/hide
Query:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG------------
        MARYRSRSRSYSPRRRSR+PPRGRKRYDD+PR+RYRESRS+RDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG            
Subjt:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG------------

Query:  ---------------VSTPENRVAGATEG-----VLQEGLRDGGIVLT------------HAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPR
                       +   E R+  A E       ++   R  G                H++   P   +     +RGARDEYLSPARSRSISRS SPR
Subjt:  ---------------VSTPENRVAGATEG-----VLQEGLRDGGIVLT------------HAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPR

Query:  DRRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY
        DRRDYSRSP+PKENGRSPR VDIARSRSRSPRA SRSPSGSRSRSY
Subjt:  DRRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSY

SwissProt top hitse value%identityAlignment
Q09511 Probable splicing factor, arginine/serine-rich 41.6e-0835Show/hide
Query:  SGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGVSTP-------ENRVA----GATEGVLQEGLRDGGIVLTHAHLHLPGMIQEVKHWNRGARD
        + L + NL     P DLR  FER+G + DV++P++ Y+  S         E R A      T+G L +G     + +T A    P   +  +    G R 
Subjt:  SGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGVSTP-------ENRVA----GATEGVLQEGLRDGGIVLTHAHLHLPGMIQEVKHWNRGARD

Query:  EYLSPARSRS--ISRSRSPRDRRDYSRSPSPKENGRSPRDVDIARSRSRSP---------------RAVSRSPSGSRSRS
              RSRS   SRSRSPR  R  +RSP  ++   SP   D +RSRSRSP               R+ SRSPS SRS S
Subjt:  EYLSPARSRS--ISRSRSPRDRRDYSRSPSPKENGRSPRDVDIARSRSRSP---------------RAVSRSPSGSRSRS

Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL283.8e-2645Show/hide
Query:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT----GVSTPENRV
        MAR RSRSRSYSPR R RSPPR RK YDD    R RE  S RD  S  PSGLL+RNLPLDARP DLR  FERFGP+KD+YLP+NYYT    G    + R 
Subjt:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT----GVSTPENRV

Query:  AGATEGVLQE------GLRDGGIVLTHAHLHLPGMIQEVKHWN--RGARDEYLSPARSRSISRSRSPRDR-RDYSRSPSP--KENGRSPRDVDIARSRSR
        A      ++       G R+  IV    +   P   QE++  N   G   +Y   +        RSPR R R +SRS SP  +E+  S    D   S  R
Subjt:  AGATEGVLQE------GLRDGGIVLTHAHLHLPGMIQEVKHWN--RGARDEYLSPARSRSISRSRSPRDR-RDYSRSPSP--KENGRSPRDVDIARSRSR

Query:  SPRAVSRSPSGSRSRSYRMK
          R++SRSP     R Y+ +
Subjt:  SPRAVSRSPSGSRSRSYRMK

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL302.1e-1636.14Show/hide
Query:  YSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG-------VSTPENRVAGATEGV
        YSP RR     RGR      PR  Y        RR  +   LLVRN+PLD RPE+LR PFERFGPV+DVY+P++YY+G       V   +   AG  +  
Subjt:  YSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG-------VSTPENRVAGATEGV

Query:  LQE----GLRDGGIVLTHAHLHLPGMIQEVKHWNR---GARDEYLSPARSRSISRSRSPR-------DRRDYSRSPSPKENGRSPR--------------
        +      G     +V + +      M  + +  +R   G+RD     +RSRSISRSRSPR         R  S SP+P+  G  PR              
Subjt:  LQE----GLRDGGIVLTHAHLHLPGMIQEVKHWNR---GARDEYLSPARSRSISRSRSPR-------DRRDYSRSPSPKENGRSPR--------------

Query:  ----------------DVDI-------ARSRSRSPRAVSRSPSGSRSRS
                        D +I       A  R R  RAVSRSPSGSRSRS
Subjt:  ----------------DVDI-------ARSRSRSPRAVSRSPSGSRSRS

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A6.3e-1338.79Show/hide
Query:  RSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG---------VSTPENRVA
        R RSY+P     SPPRG  R    P  R R   S   R S  P+ LLVRNL  D R EDLR PFE+FGPVKD+YLP++YYTG            P +   
Subjt:  RSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG---------VSTPENRVA

Query:  G--ATEGVLQEGLRDGGIVLTHAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSP---RDRRDYSRS---PSPKENGRSPRDVDIARSRSRSPRA
             +G L  G R+  +V    +   P    E++  +RG R       R      SRSP   R RR  SRS    SP       R V     R    R+
Subjt:  G--ATEGVLQEGLRDGGIVLTHAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSP---RDRRDYSRS---PSPKENGRSPRDVDIARSRSRSPRA

Query:  VSRSP--SGSRSRS
         SRSP  +GSR RS
Subjt:  VSRSP--SGSRSRS

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL335.7e-1437.91Show/hide
Query:  RSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG---------VSTPENRVA
        R RSY+P     SPPRG  R    P  R R    Y  R    P+ LLVRNL  D R EDLR  FE+FGPVKD+YLP++YYTG            P +   
Subjt:  RSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG---------VSTPENRVA

Query:  GA--TEGVLQEGLRDGGIVLTHAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPRDRRDYSRSP---SPKENGRSPRDVDIARSRSRSPRAVSR
             +G L  G R+  +V    +   P  ++  +      RD   +P R  S SRS  PR  R  SRS    SP      PR +     R    R+ SR
Subjt:  GA--TEGVLQEGLRDGGIVLTHAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPRDRRDYSRSP---SPKENGRSPRDVDIARSRSRSPRAVSR

Query:  SPS--GSRSRS
        SP+  GSR RS
Subjt:  SPS--GSRSRS

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 334.1e-1537.91Show/hide
Query:  RSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG---------VSTPENRVA
        R RSY+P     SPPRG  R    P  R R    Y  R    P+ LLVRNL  D R EDLR  FE+FGPVKD+YLP++YYTG            P +   
Subjt:  RSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG---------VSTPENRVA

Query:  GA--TEGVLQEGLRDGGIVLTHAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPRDRRDYSRSP---SPKENGRSPRDVDIARSRSRSPRAVSR
             +G L  G R+  +V    +   P  ++  +      RD   +P R  S SRS  PR  R  SRS    SP      PR +     R    R+ SR
Subjt:  GA--TEGVLQEGLRDGGIVLTHAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPRDRRDYSRSP---SPKENGRSPRDVDIARSRSRSPRAVSR

Query:  SPS--GSRSRS
        SP+  GSR RS
Subjt:  SPS--GSRSRS

AT1G55310.2 SC35-like splicing factor 334.1e-1537.91Show/hide
Query:  RSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG---------VSTPENRVA
        R RSY+P     SPPRG  R    P  R R    Y  R    P+ LLVRNL  D R EDLR  FE+FGPVKD+YLP++YYTG            P +   
Subjt:  RSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG---------VSTPENRVA

Query:  GA--TEGVLQEGLRDGGIVLTHAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPRDRRDYSRSP---SPKENGRSPRDVDIARSRSRSPRAVSR
             +G L  G R+  +V    +   P  ++  +      RD   +P R  S SRS  PR  R  SRS    SP      PR +     R    R+ SR
Subjt:  GA--TEGVLQEGLRDGGIVLTHAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPRDRRDYSRSP---SPKENGRSPRDVDIARSRSRSPRAVSR

Query:  SPS--GSRSRS
        SP+  GSR RS
Subjt:  SPS--GSRSRS

AT1G55310.3 SC35-like splicing factor 333.4e-1436.61Show/hide
Query:  RSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG--VSTPENRVAGATEGVL
        R RSY+P     SPPRG  R    P  R R    Y  R    P+ LLVRNL  D R EDLR  FE+FGPVKD+YLP++YYTG  + T   + +    G  
Subjt:  RSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG--VSTPENRVAGATEGVL

Query:  QEGLRDGGIVLTHAHLHLPGMI------------------QEVKHWNRGA----RDEYLSPARSRSISRSRSPRDRRDYSRSP---SPKENGRSPRDVDI
             D        H H+ G +                   E++   RG     RD   +P R  S SRS  PR  R  SRS    SP      PR +  
Subjt:  QEGLRDGGIVLTHAHLHLPGMI------------------QEVKHWNRGA----RDEYLSPARSRSISRSRSPRDRRDYSRSP---SPKENGRSPRDVDI

Query:  ARSRSRSPRAVSRSPS--GSRSRS
           R    R+ SRSP+  GSR RS
Subjt:  ARSRSRSPRAVSRSPS--GSRSRS

AT3G55460.1 SC35-like splicing factor 301.5e-1736.14Show/hide
Query:  YSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG-------VSTPENRVAGATEGV
        YSP RR     RGR      PR  Y        RR  +   LLVRN+PLD RPE+LR PFERFGPV+DVY+P++YY+G       V   +   AG  +  
Subjt:  YSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTG-------VSTPENRVAGATEGV

Query:  LQE----GLRDGGIVLTHAHLHLPGMIQEVKHWNR---GARDEYLSPARSRSISRSRSPR-------DRRDYSRSPSPKENGRSPR--------------
        +      G     +V + +      M  + +  +R   G+RD     +RSRSISRSRSPR         R  S SP+P+  G  PR              
Subjt:  LQE----GLRDGGIVLTHAHLHLPGMIQEVKHWNR---GARDEYLSPARSRSISRSRSPR-------DRRDYSRSPSPKENGRSPR--------------

Query:  ----------------DVDI-------ARSRSRSPRAVSRSPSGSRSRS
                        D +I       A  R R  RAVSRSPSGSRSRS
Subjt:  ----------------DVDI-------ARSRSRSPRAVSRSPSGSRSRS

AT5G18810.1 SC35-like splicing factor 282.7e-2745Show/hide
Query:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT----GVSTPENRV
        MAR RSRSRSYSPR R RSPPR RK YDD    R RE  S RD  S  PSGLL+RNLPLDARP DLR  FERFGP+KD+YLP+NYYT    G    + R 
Subjt:  MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYT----GVSTPENRV

Query:  AGATEGVLQE------GLRDGGIVLTHAHLHLPGMIQEVKHWN--RGARDEYLSPARSRSISRSRSPRDR-RDYSRSPSP--KENGRSPRDVDIARSRSR
        A      ++       G R+  IV    +   P   QE++  N   G   +Y   +        RSPR R R +SRS SP  +E+  S    D   S  R
Subjt:  AGATEGVLQE------GLRDGGIVLTHAHLHLPGMIQEVKHWN--RGARDEYLSPARSRSISRSRSPRDR-RDYSRSPSP--KENGRSPRDVDIARSRSR

Query:  SPRAVSRSPSGSRSRSYRMK
          R++SRSP     R Y+ +
Subjt:  SPRAVSRSPSGSRSRSYRMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGGTACCGGAGCCGGAGCAGAAGTTACAGCCCTCGCCGGCGTAGCAGAAGCCCACCACGGGGGCGGAAACGGTACGACGACGAGCCTCGAGAAAGGTACCGCGA
AAGCAGGTCTTACAGGGACCGACGCTCTCCTGCTCCTTCCGGGTTGCTCGTGCGTAATCTCCCCCTGGATGCTAGGCCGGAAGATCTTAGGATCCCGTTTGAGCGATTTG
GTCCTGTTAAGGATGTGTATCTGCCGAAAAACTACTACACTGGGGTATCCACACCGGAAAATAGAGTGGCAGGAGCTACCGAAGGCGTTCTCCAGGAAGGTCTCCGAGAC
GGCGGTATCGTTCTTACTCACGCTCACCTTCACCTGCCAGGCATGATTCAAGAAGTTAAGCATTGGAACCGTGGGGCAAGGGATGAGTATCTCTCTCCTGCACGTTCTAG
ATCAATTTCACGATCTCGTTCTCCTCGTGATAGGCGGGATTACAGCCGATCTCCGAGTCCGAAGGAGAATGGTCGGAGCCCCCGTGATGTGGACATCGCACGCAGTAGGT
CAAGGAGTCCAAGGGCTGTTAGCCGCAGTCCTTCTGGATCTCGTTCACGATCCTACAGAATGAAATTTGAGATCGCTTTAGAGTTAGTGAGAGCAAAGTTGTTGACGTTG
ACATTATTGATAAATCTTTTATTTTTCTCAATGGATGCTGGTTTCTTATCTCCAAATAACTGTTCATTATTGAACATTGTTCCGCCAAATTCCTCGTTGATGGATGCGTT
CTGGGTTCGTGCGGTGCTTCTATTGCAGTCCTCAAGATTTGTTAACCTGCCTTCAGTTGTGGCCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGGTACCGGAGCCGGAGCAGAAGTTACAGCCCTCGCCGGCGTAGCAGAAGCCCACCACGGGGGCGGAAACGGTACGACGACGAGCCTCGAGAAAGGTACCGCGA
AAGCAGGTCTTACAGGGACCGACGCTCTCCTGCTCCTTCCGGGTTGCTCGTGCGTAATCTCCCCCTGGATGCTAGGCCGGAAGATCTTAGGATCCCGTTTGAGCGATTTG
GTCCTGTTAAGGATGTGTATCTGCCGAAAAACTACTACACTGGGGTATCCACACCGGAAAATAGAGTGGCAGGAGCTACCGAAGGCGTTCTCCAGGAAGGTCTCCGAGAC
GGCGGTATCGTTCTTACTCACGCTCACCTTCACCTGCCAGGCATGATTCAAGAAGTTAAGCATTGGAACCGTGGGGCAAGGGATGAGTATCTCTCTCCTGCACGTTCTAG
ATCAATTTCACGATCTCGTTCTCCTCGTGATAGGCGGGATTACAGCCGATCTCCGAGTCCGAAGGAGAATGGTCGGAGCCCCCGTGATGTGGACATCGCACGCAGTAGGT
CAAGGAGTCCAAGGGCTGTTAGCCGCAGTCCTTCTGGATCTCGTTCACGATCCTACAGAATGAAATTTGAGATCGCTTTAGAGTTAGTGAGAGCAAAGTTGTTGACGTTG
ACATTATTGATAAATCTTTTATTTTTCTCAATGGATGCTGGTTTCTTATCTCCAAATAACTGTTCATTATTGAACATTGTTCCGCCAAATTCCTCGTTGATGGATGCGTT
CTGGGTTCGTGCGGTGCTTCTATTGCAGTCCTCAAGATTTGTTAACCTGCCTTCAGTTGTGGCCAGATGA
Protein sequenceShow/hide protein sequence
MARYRSRSRSYSPRRRSRSPPRGRKRYDDEPRERYRESRSYRDRRSPAPSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGVSTPENRVAGATEGVLQEGLRD
GGIVLTHAHLHLPGMIQEVKHWNRGARDEYLSPARSRSISRSRSPRDRRDYSRSPSPKENGRSPRDVDIARSRSRSPRAVSRSPSGSRSRSYRMKFEIALELVRAKLLTL
TLLINLLFFSMDAGFLSPNNCSLLNIVPPNSSLMDAFWVRAVLLLQSSRFVNLPSVVAR