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Spg031841 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031841
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionmicrotubule-associated protein RP/EB family member 1-like
Genome locationscaffold11:44307140..44307541
RNA-Seq ExpressionSpg031841
SyntenySpg031841
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597057.1 hypothetical protein SDJN03_10237, partial [Cucurbita argyrosperma subsp. sororia]4.3e-0943.97Show/hide
Query:  QRSSSLPRHTPNGTSDEVVPQPKIPPPATTAAAAPAPAPLSPEAKSDHYRQERAVVNIRGKNVGAIMQINGSSDGVEIAAKEDDEKERKLNWSSLLRRPL
        QR  SLPR TP   S +      IPPPA  AAAAP P P    AKS H++  +A +NIRG++VG +M+IN S +G+EI      +K  + N+    ++ +
Subjt:  QRSSSLPRHTPNGTSDEVVPQPKIPPPATTAAAAPAPAPLSPEAKSDHYRQERAVVNIRGKNVGAIMQINGSSDGVEIAAKEDDEKERKLNWSSLLRRPL

Query:  V---NGNFQGVNNSFV
        +   NGNFQGVNNS +
Subjt:  V---NGNFQGVNNSFV

XP_004133796.1 extensin [Cucumis sativus]5.8e-0642.5Show/hide
Query:  PEAKSDHYRQERAVVNIRGKNVGAIMQINGSSDGVEI--------AAKEDDEKERKLNWSSLLRRPLVNGNFQGVNNSFV
        P+ K  H + +  V+NI+G+NVGA+M I  SSDG E+         +KE++EK  K N S+   +  +N NFQGVNNS +
Subjt:  PEAKSDHYRQERAVVNIRGKNVGAIMQINGSSDGVEI--------AAKEDDEKERKLNWSSLLRRPLVNGNFQGVNNSFV

XP_022147442.1 proline-rich receptor-like protein kinase PERK2 [Momordica charantia]2.2e-0534.04Show/hide
Query:  TLPRCDRRWQRSSSLPRHTPNGTSDEVVPQPKIPPPATTAAAAPAPAPLSPEAKSDHYRQERA---VVNIRGKNVGAIMQINGSSDGVEIAAKE------
        TLPR + + +   ++   +P     + +  PK+  P       P   P    +    Y+Q++    V+ I+G+NVGAIM I  SSDG E+  K+      
Subjt:  TLPRCDRRWQRSSSLPRHTPNGTSDEVVPQPKIPPPATTAAAAPAPAPLSPEAKSDHYRQERA---VVNIRGKNVGAIMQINGSSDGVEIAAKE------

Query:  -DDEKERKLNWSSLLRRPLVNGNFQGVNNSFVQLILHLSDF
         DDEK  K   SSL  +  +N NFQGVNNS    +L+ S F
Subjt:  -DDEKERKLNWSSLLRRPLVNGNFQGVNNSFVQLILHLSDF

XP_023521993.1 uncharacterized protein LOC111785865 [Cucurbita pepo subsp. pepo]2.2e-0531.25Show/hide
Query:  MTTLPRCDRRWQRSSSLPRHTPNGTSDEV-VPQPK-------IPPPATTA----------AAAPAPAPLSPE------------AKSDH-----------
        M  LPR  R W R SSLPR    GT+  + VP P         PPP  TA           +   P+P+  +            AK+DH           
Subjt:  MTTLPRCDRRWQRSSSLPRHTPNGTSDEV-VPQPK-------IPPPATTA----------AAAPAPAPLSPE------------AKSDH-----------

Query:  ----YRQERAVVNIRGKNVGAIMQINGSSDGVE-------IAAKEDDEKERKLNWSSLLRRPLVNGNFQGVNNSFV
            ++Q+  V+NI+G+NVGA+M I  SSD  E       ++   ++EK+   + S++  +  +N NFQGVNNS +
Subjt:  ----YRQERAVVNIRGKNVGAIMQINGSSDGVE-------IAAKEDDEKERKLNWSSLLRRPLVNGNFQGVNNSFV

XP_038904572.1 pollen-specific leucine-rich repeat extensin-like protein 1 [Benincasa hispida]8.4e-0536.43Show/hide
Query:  LPRCD-RRWQRSSSLPRHTPNGTSDEVVPQPKIPPPATTAAAAPAPAPLSPEAKSDHYRQERA----VVNIRGKNVGAIMQINGSSDGVEIAAKE-DDEK
        LPR + RR    +  PR  P     +V+ Q  +     T    P      P  K  H +Q++     V+NI+G+NVGA+M I  SSDG EI  K+ + E 
Subjt:  LPRCD-RRWQRSSSLPRHTPNGTSDEVVPQPKIPPPATTAAAAPAPAPLSPEAKSDHYRQERA----VVNIRGKNVGAIMQINGSSDGVEIAAKE-DDEK

Query:  ERKLNWS--SLLRRPLVNGNFQGVNNSFV
        E K N S  +   +  +N NFQGVNNS +
Subjt:  ERKLNWS--SLLRRPLVNGNFQGVNNSFV

TrEMBL top hitse value%identityAlignment
A0A0A0L5T3 Uncharacterized protein2.8e-0642.5Show/hide
Query:  PEAKSDHYRQERAVVNIRGKNVGAIMQINGSSDGVEI--------AAKEDDEKERKLNWSSLLRRPLVNGNFQGVNNSFV
        P+ K  H + +  V+NI+G+NVGA+M I  SSDG E+         +KE++EK  K N S+   +  +N NFQGVNNS +
Subjt:  PEAKSDHYRQERAVVNIRGKNVGAIMQINGSSDGVEI--------AAKEDDEKERKLNWSSLLRRPLVNGNFQGVNNSFV

A0A1S3AVJ6 microtubule-associated protein RP/EB family member 1-like1.2e-0435.61Show/hide
Query:  LPRCD-RRWQRSSSLPRHTPNGTSDEVVPQPKI--PPPATTAAAAPAPAPLSPEAKSDHYRQERAVVNIRGKNVGAIMQINGSSDGVEI--------AAK
        LPR + RR    S  PR  P     +++ Q      P  T            P+ K  H + +  V+NI+G NVGA+M I  SSDG EI         +K
Subjt:  LPRCD-RRWQRSSSLPRHTPNGTSDEVVPQPKI--PPPATTAAAAPAPAPLSPEAKSDHYRQERAVVNIRGKNVGAIMQINGSSDGVEI--------AAK

Query:  EDDEKERKLNWSSLLRRPLVNGNFQGVNNSFV
        E++EK  K N S+   +  +N NFQGVNNS +
Subjt:  EDDEKERKLNWSSLLRRPLVNGNFQGVNNSFV

A0A5A7TZ60 Microtubule-associated protein RP/EB family member 1-like1.2e-0435.61Show/hide
Query:  LPRCD-RRWQRSSSLPRHTPNGTSDEVVPQPKI--PPPATTAAAAPAPAPLSPEAKSDHYRQERAVVNIRGKNVGAIMQINGSSDGVEI--------AAK
        LPR + RR    S  PR  P     +++ Q      P  T            P+ K  H + +  V+NI+G NVGA+M I  SSDG EI         +K
Subjt:  LPRCD-RRWQRSSSLPRHTPNGTSDEVVPQPKI--PPPATTAAAAPAPAPLSPEAKSDHYRQERAVVNIRGKNVGAIMQINGSSDGVEI--------AAK

Query:  EDDEKERKLNWSSLLRRPLVNGNFQGVNNSFV
        E++EK  K N S+   +  +N NFQGVNNS +
Subjt:  EDDEKERKLNWSSLLRRPLVNGNFQGVNNSFV

A0A6J1D2D2 proline-rich receptor-like protein kinase PERK21.1e-0534.04Show/hide
Query:  TLPRCDRRWQRSSSLPRHTPNGTSDEVVPQPKIPPPATTAAAAPAPAPLSPEAKSDHYRQERA---VVNIRGKNVGAIMQINGSSDGVEIAAKE------
        TLPR + + +   ++   +P     + +  PK+  P       P   P    +    Y+Q++    V+ I+G+NVGAIM I  SSDG E+  K+      
Subjt:  TLPRCDRRWQRSSSLPRHTPNGTSDEVVPQPKIPPPATTAAAAPAPAPLSPEAKSDHYRQERA---VVNIRGKNVGAIMQINGSSDGVEIAAKE------

Query:  -DDEKERKLNWSSLLRRPLVNGNFQGVNNSFVQLILHLSDF
         DDEK  K   SSL  +  +N NFQGVNNS    +L+ S F
Subjt:  -DDEKERKLNWSSLLRRPLVNGNFQGVNNSFVQLILHLSDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTCTTCCTCGCTGTGATCGTAGATGGCAACGTTCCTCTTCTCTTCCCCGCCATACTCCAAATGGCACCTCTGACGAAGTGGTGCCCCAACCCAAAATTCCACC
ACCCGCTACCACCGCTGCCGCCGCCCCCGCTCCCGCGCCACTCTCTCCCGAGGCAAAATCTGATCATTACCGTCAGGAGAGGGCGGTTGTAAACATTAGAGGGAAGAATG
TGGGCGCTATTATGCAAATTAATGGATCATCTGATGGGGTAGAAATTGCTGCAAAGGAAGATGACGAGAAAGAAAGGAAATTAAATTGGTCGTCGCTGCTGAGACGACCT
TTGGTGAATGGCAATTTTCAAGGGGTCAACAATTCCTTTGTACAACTCATCTTGCACCTATCGGACTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACTCTTCCTCGCTGTGATCGTAGATGGCAACGTTCCTCTTCTCTTCCCCGCCATACTCCAAATGGCACCTCTGACGAAGTGGTGCCCCAACCCAAAATTCCACC
ACCCGCTACCACCGCTGCCGCCGCCCCCGCTCCCGCGCCACTCTCTCCCGAGGCAAAATCTGATCATTACCGTCAGGAGAGGGCGGTTGTAAACATTAGAGGGAAGAATG
TGGGCGCTATTATGCAAATTAATGGATCATCTGATGGGGTAGAAATTGCTGCAAAGGAAGATGACGAGAAAGAAAGGAAATTAAATTGGTCGTCGCTGCTGAGACGACCT
TTGGTGAATGGCAATTTTCAAGGGGTCAACAATTCCTTTGTACAACTCATCTTGCACCTATCGGACTTCTGA
Protein sequenceShow/hide protein sequence
MTTLPRCDRRWQRSSSLPRHTPNGTSDEVVPQPKIPPPATTAAAAPAPAPLSPEAKSDHYRQERAVVNIRGKNVGAIMQINGSSDGVEIAAKEDDEKERKLNWSSLLRRP
LVNGNFQGVNNSFVQLILHLSDF