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Spg031870 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031870
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S acidic ribosomal protein P1-like
Genome locationscaffold11:44713266..44714604
RNA-Seq ExpressionSpg031870
SyntenySpg031870
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133766.1 60S acidic ribosomal protein P1 [Cucumis sativus]9.3e-4588.5Show/hide
Query:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK
        MSTGEIACSYAALILYDDNIP+T+EK+ATLV AAKV +VESYW+GLF KLAEKR+IGDLILNVGAGGGA  AAAAP GGAAGG AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

XP_008437779.1 PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo]6.6e-4385.84Show/hide
Query:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK
        MSTGEIACSYAALILYDDNIP+T+EK+ATLV AA V +VESYW+ LF KLAEKRNIGDLILNVGAGGGA  AAA P GGAA G AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

XP_022980127.1 60S acidic ribosomal protein P1-like [Cucurbita maxima]5.6e-4288.5Show/hide
Query:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK
        MS GEIACSYA+LIL DD IP+T+EKLATLVNAAKV NVESYWF LF KLAEKRNI DLILNVGAGGGA A AAAP GGAAGGAAAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

XP_023528725.1 60S acidic ribosomal protein P1-like [Cucurbita pepo subsp. pepo]1.4e-4086.73Show/hide
Query:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK
        MS GEIACSYA+LIL DD IP+T+EKLATLV AAKV  VESYWF LF KLAEKRNI DLILNVGAGGGA A AAAP GGAAGGAAAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

XP_038883955.1 60S acidic ribosomal protein P1-like [Benincasa hispida]1.2e-4487.61Show/hide
Query:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK
        MSTGEIACSYAALILYDDNIP+T+EK+AT+V AA VP+VESYWFGLF KLAEKRNIGDLILNVGAGGGA  AAA P  G AGGAAAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0L5M7 Uncharacterized protein4.5e-4588.5Show/hide
Query:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK
        MSTGEIACSYAALILYDDNIP+T+EK+ATLV AAKV +VESYW+GLF KLAEKR+IGDLILNVGAGGGA  AAAAP GGAAGG AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A1S3AUG9 60S acidic ribosomal protein P1-like3.2e-4385.84Show/hide
Query:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK
        MSTGEIACSYAALILYDDNIP+T+EK+ATLV AA V +VESYW+ LF KLAEKRNIGDLILNVGAGGGA  AAA P GGAA G AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A5D3DB57 60S acidic ribosomal protein P1-like3.2e-4385.84Show/hide
Query:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK
        MSTGEIACSYAALILYDDNIP+T+EK+ATLV AA V +VESYW+ LF KLAEKRNIGDLILNVGAGGGA  AAA P GGAA G AAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A6J1ICK4 60S acidic ribosomal protein P1-like1.5e-4086.73Show/hide
Query:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK
        MS GEIACSYAALILYDDNIPVT+EKLATLV AA V + ESYWF LF KLAEKRNIGDLI+NVGAGGGA  AAA P GG AGGAAAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

A0A6J1IQJ8 60S acidic ribosomal protein P1-like2.7e-4288.5Show/hide
Query:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK
        MS GEIACSYA+LIL DD IP+T+EKLATLVNAAKV NVESYWF LF KLAEKRNI DLILNVGAGGGA A AAAP GGAAGGAAAAAAPPPEEKKEEPK
Subjt:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPK

Query:  EESDDDMGFSLFD
        EESDDDMGFSLFD
Subjt:  EESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-24.8e-2865.81Show/hide
Query:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA---GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I +TS+K+ATLV AA V  +ESYW  LF K+AEKRN+ DLI+NVGA   GGGAP +AAAP   AA G AAAAAP  EEKK
Subjt:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA---GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKK

Query:  EEPKEESDDDMGFSLFD
        +EP EESD D+GF LFD
Subjt:  EEPKEESDDDMGFSLFD

P52855 60S acidic ribosomal protein P12.1e-3171.05Show/hide
Query:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGG-APAAAAAPVGGAAGGAAAAAAPPPEEKKEEP
        M++GE+AC YAALIL DD I +T+EK+AT+V AA +  VESYW  LF KL EKRN+ DLIL+VG+GGG AP AAAAP    AGGAAAAAAP  EEKKEE 
Subjt:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGG-APAAAAAPVGGAAGGAAAAAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

Q8LCW9 60S acidic ribosomal protein P1-15.3e-2764.66Show/hide
Query:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKE
        MST GE+ACSYA +IL D+ I +T++K+ATLV AA V ++ESYW  LF K+AEKRN+ DLI+NVGA  GGGAP AAAAP   AAGG AAAA    E+KK+
Subjt:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKE

Query:  EPKEESDDDMGFSLFD
        EP EESD D+GF LFD
Subjt:  EPKEESDDDMGFSLFD

Q8LEQ0 60S acidic ribosomal protein P1-31.8e-2766.67Show/hide
Query:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEE-KK
        MST GE+ACSYA +IL D+ I +T++K+ATLV AA V  +ESYW  LF K+AEKRN+ DLI+NVGA  GGGAP AAAAP   AAGG AAAAAP  EE KK
Subjt:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEE-KK

Query:  EEPKEESDDDMGFSLFD
        +EP EESD D+GF LFD
Subjt:  EEPKEESDDDMGFSLFD

Q9HGV0 60S acidic ribosomal protein P11.0e-2562.28Show/hide
Query:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAA-AAAPPPEEKKEEP
        MST E+ACSYAALIL DD + +T++K+ TL+ AAKV +VE  W  LF K  E ++I DL+ NVG+GG   AAA A VGGAA GAAA A A   EEKKEE 
Subjt:  MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAA-AAAPPPEEKKEEP

Query:  KEESDDDMGFSLFD
        KEESD+DMGF LFD
Subjt:  KEESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family3.8e-2864.66Show/hide
Query:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKE
        MST GE+ACSYA +IL D+ I +T++K+ATLV AA V ++ESYW  LF K+AEKRN+ DLI+NVGA  GGGAP AAAAP   AAGG AAAA    E+KK+
Subjt:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKE

Query:  EPKEESDDDMGFSLFD
        EP EESD D+GF LFD
Subjt:  EPKEESDDDMGFSLFD

AT4G00810.1 60S acidic ribosomal protein family3.4e-2965.81Show/hide
Query:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA---GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I +TS+K+ATLV AA V  +ESYW  LF K+AEKRN+ DLI+NVGA   GGGAP +AAAP   AA G AAAAAP  EEKK
Subjt:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA---GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKK

Query:  EEPKEESDDDMGFSLFD
        +EP EESD D+GF LFD
Subjt:  EEPKEESDDDMGFSLFD

AT4G00810.2 60S acidic ribosomal protein family3.4e-2965.81Show/hide
Query:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA---GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKK
        MST GE+ACSYA +IL D+ I +TS+K+ATLV AA V  +ESYW  LF K+AEKRN+ DLI+NVGA   GGGAP +AAAP   AA G AAAAAP  EEKK
Subjt:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA---GGGAPAAAAAPVGGAAGGAAAAAAPPPEEKK

Query:  EEPKEESDDDMGFSLFD
        +EP EESD D+GF LFD
Subjt:  EEPKEESDDDMGFSLFD

AT5G47700.1 60S acidic ribosomal protein family1.3e-2866.67Show/hide
Query:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEE-KK
        MST GE+ACSYA +IL D+ I +T++K+ATLV AA V  +ESYW  LF K+AEKRN+ DLI+NVGA  GGGAP AAAAP   AAGG AAAAAP  EE KK
Subjt:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEE-KK

Query:  EEPKEESDDDMGFSLFD
        +EP EESD D+GF LFD
Subjt:  EEPKEESDDDMGFSLFD

AT5G47700.2 60S acidic ribosomal protein family1.3e-2866.67Show/hide
Query:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEE-KK
        MST GE+ACSYA +IL D+ I +T++K+ATLV AA V  +ESYW  LF K+AEKRN+ DLI+NVGA  GGGAP AAAAP   AAGG AAAAAP  EE KK
Subjt:  MST-GEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGA--GGGAPAAAAAPVGGAAGGAAAAAAPPPEE-KK

Query:  EEPKEESDDDMGFSLFD
        +EP EESD D+GF LFD
Subjt:  EEPKEESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACCGGAGAAATTGCTTGCTCCTACGCTGCCCTGATCCTTTACGACGACAACATCCCTGTTACCTCAGAGAAGCTTGCCACGCTTGTTAACGCAGCTAAGGTGCC
CAATGTGGAGTCCTACTGGTTCGGCCTTTTCACTAAGCTGGCTGAGAAGCGTAACATTGGGGATTTGATCCTGAATGTTGGGGCCGGTGGAGGTGCCCCAGCCGCTGCTG
CTGCCCCAGTTGGTGGAGCTGCGGGTGGGGCTGCTGCCGCAGCTGCTCCTCCGCCAGAAGAGAAAAAGGAAGAACCAAAGGAAGAGAGTGACGATGATATGGGATTCAGT
TTGTTCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACCGGAGAAATTGCTTGCTCCTACGCTGCCCTGATCCTTTACGACGACAACATCCCTGTTACCTCAGAGAAGCTTGCCACGCTTGTTAACGCAGCTAAGGTGCC
CAATGTGGAGTCCTACTGGTTCGGCCTTTTCACTAAGCTGGCTGAGAAGCGTAACATTGGGGATTTGATCCTGAATGTTGGGGCCGGTGGAGGTGCCCCAGCCGCTGCTG
CTGCCCCAGTTGGTGGAGCTGCGGGTGGGGCTGCTGCCGCAGCTGCTCCTCCGCCAGAAGAGAAAAAGGAAGAACCAAAGGAAGAGAGTGACGATGATATGGGATTCAGT
TTGTTCGATTAA
Protein sequenceShow/hide protein sequence
MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFTKLAEKRNIGDLILNVGAGGGAPAAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFS
LFD