CuGenDBv2

Gene ID	Spg031874
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DEAD-box ATP-dependent RNA helicase 50
Genome location	scaffold11:36346580..36348373
RNA-Seq Expression	Spg031874
Synteny	Spg031874
Gene Ontology terms	GO:0006968 - cellular defense response (biological process) GO:0050832 - defense response to fungus (biological process) GO:0071369 - cellular response to ethylene stimulus (biological process) GO:0071395 - cellular response to jasmonic acid stimulus (biological process) GO:0071446 - cellular response to salicylic acid stimulus (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003724 - RNA helicase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016787 - hydrolase activity (molecular function)
InterPro domains	IPR014014 - RNA helicase, DEAD-box type, Q motif

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6582132.1 DEAD-box ATP-dependent RNA helicase 50, partial [Cucurbita argyrosperma subsp. sororia]

7.4e-108

73.26

Show/hide

Query:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS
        MARAPIHTPANFLTS+ LE  +L R+GCLR PFLSQT RP+PAS+LV+V GCVIAGYARKSVDS G  QLTDD+DFT+ SSDELRYDGD TVD+  IK S
Subjt:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS

Query:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDR-LRAAPNLSRSEQL
        GT RRISIG  GRLK+ K+KAIV KG++  EE +DDVRVPT  NGS +ISDRPH K KTLGEKK+VN LRN E+ SR SE QD+DR  R AP+LSRSEQ 
Subjt:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDR-LRAAPNLSRSEQL

Query:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPG
        VP  SA YFRGWGSRGPYDSEYE TQPKQQK SSEKGFYSRKSFKDLGCT+YMIESLRRQNFLRPSQIQ          K ++SV+ G
Subjt:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPG

KAG7018534.1 DEAD-box ATP-dependent RNA helicase 50 [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-108

73.96

Show/hide

Query:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS
        MARAPIHTPANFLTS+ LE  +L R+GCLR PFLSQT RP+PAS+LV+V GCVIAGYARKSVDS G  QLTDD+DFTV SSDELRYDGD TVD+  IK S
Subjt:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS

Query:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDR-LRAAPNLSRSEQL
        GT RRISIG  GRLK+QK+KAIV KG++  EE +DDVRVPT  NGS +ISDRPH K KTLGEKK+VN LRN E+ SR SE QD+DR  R AP+LSRSEQ 
Subjt:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDR-LRAAPNLSRSEQL

Query:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPG
        VP  SA YFRGWGSRGPYDSEYE TQPKQQK SSEKGFYSRKSFKDLGCT+YMIESLRRQNFLRPSQIQ          K ++SV+ G
Subjt:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPG

XP_004147668.1 DEAD-box ATP-dependent RNA helicase 50 [Cucumis sativus]

1.3e-109

69.97

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Query:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS
        MAR PIHTPANFLTSR LES +LGR  CL SPFLSQ+ RP+  ++LV VGGCV+AGYARKSVDSAGVYQLTD+DDFTV+SS+ELRYDGDETVDD   KTS
Subjt:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS

Query:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDRLR-AAPNLSRSEQL
        G R+RISIGSFGRLKTQK+KAIVTKG++ NEE R+DVR PTP++GS +ISD P SKVKT+GEKKR+NALRN EK SRPSE QDR+R +  APNLSRSE L
Subjt:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDRLR-AAPNLSRSEQL

Query:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPGVLYYVSLVEAQS
        V  GS +YFRGWGSRGPY SEYEPT+ KQQKISSEKGFYSRKSFK+LGC++YMIESLRRQNF+RPSQIQ          K +SSV+ G    +S      
Subjt:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPGVLYYVSLVEAQS

Query:  LVLHLLIQVDAKL
          L  L+ +  +L
Subjt:  LVLHLLIQVDAKL

XP_008439020.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 50 [Cucumis melo]

8.7e-109

69.33

Show/hide

Query:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS
        MARAPIHTPANFLTSR LES +LGR  CL SPFLSQ+ R +  ++LV VGGCV+ GYARKSVDSAGVYQLTD+DDFTV+SS+ELRYDGDETVDD   KTS
Subjt:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS

Query:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDRLR-AAPNLSRSEQL
        G R+RISIGSFGRLKTQK+KAIVTKG++ NEE R+DVR PTP++GS +I+D P SKVKT+GEKKR+NALRN EK SRPSE QDR+R +  APNLSRSE L
Subjt:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDRLR-AAPNLSRSEQL

Query:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPGVLYYVSLVEAQS
        V  GS +YFRGWGSRGPY SEYEPT+ KQQKISSEKGFYSRKSFKDLGC++YMIESLRRQNF+RPSQIQ          K ++SV+ G    +S      
Subjt:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPGVLYYVSLVEAQS

Query:  LVLHLLIQVDAKL
          L  L+ +  +L
Subjt:  LVLHLLIQVDAKL

XP_038894152.1 DEAD-box ATP-dependent RNA helicase 50 [Benincasa hispida]

8.7e-117

77.05

Show/hide

Query:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS
        MARAPIHTPANFLTSR LES +L RHGCLRSPFLS + RP+PAS+LVIVGGCV+AGYARKSVDS GVYQLTDD+DFTV+SS+ELR+DGDET DD GI+TS
Subjt:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS

Query:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDR-----LRAAPNLSR
        GTRR+ISIGSFGRLKTQK++AIVTKG++   E RDDVRVPTP +GSS+ISDR HSKVKT+GEKKRVNALR+ EK SRPSE QDRDR      R APNLSR
Subjt:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDR-----LRAAPNLSR

Query:  SEQLVPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPG
        SE LVP GSAAYFRGWGSRGPY SEYEPT+PKQQK SSEKGFYSRKSFKDLGC++YMIESLR+QNF+RPSQIQ          K ++SV+ G
Subjt:  SEQLVPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAW7 Uncharacterized protein

6.5e-110

69.97

Show/hide

Query:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS
        MAR PIHTPANFLTSR LES +LGR  CL SPFLSQ+ RP+  ++LV VGGCV+AGYARKSVDSAGVYQLTD+DDFTV+SS+ELRYDGDETVDD   KTS
Subjt:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS

Query:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDRLR-AAPNLSRSEQL
        G R+RISIGSFGRLKTQK+KAIVTKG++ NEE R+DVR PTP++GS +ISD P SKVKT+GEKKR+NALRN EK SRPSE QDR+R +  APNLSRSE L
Subjt:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDRLR-AAPNLSRSEQL

Query:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPGVLYYVSLVEAQS
        V  GS +YFRGWGSRGPY SEYEPT+ KQQKISSEKGFYSRKSFK+LGC++YMIESLRRQNF+RPSQIQ          K +SSV+ G    +S      
Subjt:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPGVLYYVSLVEAQS

Query:  LVLHLLIQVDAKL
          L  L+ +  +L
Subjt:  LVLHLLIQVDAKL

A0A1S3AXT4 DEAD-box ATP-dependent RNA helicase 50

4.2e-109

69.33

Show/hide

Query:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS
        MARAPIHTPANFLTSR LES +LGR  CL SPFLSQ+ R +  ++LV VGGCV+ GYARKSVDSAGVYQLTD+DDFTV+SS+ELRYDGDETVDD   KTS
Subjt:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS

Query:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDRLR-AAPNLSRSEQL
        G R+RISIGSFGRLKTQK+KAIVTKG++ NEE R+DVR PTP++GS +I+D P SKVKT+GEKKR+NALRN EK SRPSE QDR+R +  APNLSRSE L
Subjt:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDRLR-AAPNLSRSEQL

Query:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPGVLYYVSLVEAQS
        V  GS +YFRGWGSRGPY SEYEPT+ KQQKISSEKGFYSRKSFKDLGC++YMIESLRRQNF+RPSQIQ          K ++SV+ G    +S      
Subjt:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPGVLYYVSLVEAQS

Query:  LVLHLLIQVDAKL
          L  L+ +  +L
Subjt:  LVLHLLIQVDAKL

A0A5A7UF84 DEAD-box ATP-dependent RNA helicase 50

4.2e-109

69.33

Show/hide

Query:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS
        MARAPIHTPANFLTSR LES +LGR  CL SPFLSQ+ R +  ++LV VGGCV+ GYARKSVDSAGVYQLTD+DDFTV+SS+ELRYDGDETVDD   KTS
Subjt:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS

Query:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDRLR-AAPNLSRSEQL
        G R+RISIGSFGRLKTQK+KAIVTKG++ NEE R+DVR PTP++GS +I+D P SKVKT+GEKKR+NALRN EK SRPSE QDR+R +  APNLSRSE L
Subjt:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDRLR-AAPNLSRSEQL

Query:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPGVLYYVSLVEAQS
        V  GS +YFRGWGSRGPY SEYEPT+ KQQKISSEKGFYSRKSFKDLGC++YMIESLRRQNF+RPSQIQ          K ++SV+ G    +S      
Subjt:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPGVLYYVSLVEAQS

Query:  LVLHLLIQVDAKL
          L  L+ +  +L
Subjt:  LVLHLLIQVDAKL

A0A6J1GVR1 DEAD-box ATP-dependent RNA helicase 50 isoform X1

1.4e-107

73.26

Show/hide

Query:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS
        MA APIHTPANFLTS+ LE  +L R+GCLR PFLSQT RP+PAS+LV+V GCVIAGYARKSVDS G  QLTDD+DFTV SSDELRYDGD TVD+  IK S
Subjt:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS

Query:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDR-LRAAPNLSRSEQL
        GT RRISIG  GRLK+ K+KAIV KG++  EE +DDVRVPT  NGS +ISDRPH K KTLGEKK+VN LRN E+ SR SE QD+DR  R AP+LSRSEQ 
Subjt:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDR-LRAAPNLSRSEQL

Query:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPG
        VP  SA YFRGWGSRGPYDSEYE TQPKQQK SSEKGFYSRKSFKDLGCT+YMIESLRRQNFLRPSQIQ          K ++SV+ G
Subjt:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPG

A0A6J1IRK9 DEAD-box ATP-dependent RNA helicase 50 isoform X1

4.8e-105

72.92

Show/hide

Query:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS
        MARAPIHTPANFLTSR LE  +L R+GCLR PFLSQT RP+PAS+LVIV GCVIAGYARKSVDS G  QLTDD+DFTV SS EL YDGD TVD+  IK S
Subjt:  MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTS

Query:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDR-LRAAPNLSRSEQL
        GT RRISIG  GRLK+QK+KAIV KG++  EE +DDVRV T  NGS +ISDRPHSKVKT GEKK+VN LRN E+ SR SE QD+ R  R  P+LSRSEQ 
Subjt:  GTRRRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDR-LRAAPNLSRSEQL

Query:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPG
        VP  SA +FRGWGSRGPYDSEYE TQPKQQK SSEKGFYSRKSFKDLGCT+YMIESLRRQNFLRPSQIQ          K ++SV+ G
Subjt:  VPGGSAAYFRGWGSRGPYDSEYEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPG

SwissProt top hits

e value

%identity

Alignment

Q0DVX2 DEAD-box ATP-dependent RNA helicase 50

4.3e-10

29.41

Show/hide

Query:  GGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDG--DETVDDGGIKTSGTR---------RRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVR
        GG    GY R  +D+ G Y+L D      +    + + G  D ++    + ++ TR         R  SIG+FGRLK QK+K +  + A    E  D  R
Subjt:  GGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDG--DETVDDGGIKTSGTR---------RRISIGSFGRLKTQKIKAIVTKGAKRNEEFRDDVR

Query:  VPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDRLRAAPNLSRSEQLVPGGSAAYFRG----WGSR--GPYDSEYEPTQPKQQKIS
        + T     S  S+ P  +    G     +  RN  + SR  +    D+ R A +L+   +   G     F G     GS+  G         Q ++QK  
Subjt:  VPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDRLRAAPNLSRSEQLVPGGSAAYFRG----WGSR--GPYDSEYEPTQPKQQKIS

Query:  SEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQIL
         + GF+SR+SFK++GC+D ++ +LR   F RPS IQ +
Subjt:  SEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQIL

Q8GUG7 DEAD-box ATP-dependent RNA helicase 50

1.4e-05

38.03

Show/hide

Query:  GSAAYFRGWGSRGP--YDSEYEPTQPKQQ-KISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQIL
        GS    RGWG R    Y  + +  + + + K + E GF+SRK+F ++GC++ M+++L+ QNF RP+ IQ +
Subjt:  GSAAYFRGWGSRGP--YDSEYEPTQPKQQ-KISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQIL

Arabidopsis top hits

e value

%identity

Alignment

AT3G06980.1 DEA(D/H)-box RNA helicase family protein

1.0e-06

38.03

Show/hide

Query:  GSAAYFRGWGSRGP--YDSEYEPTQPKQQ-KISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQIL
        GS    RGWG R    Y  + +  + + + K + E GF+SRK+F ++GC++ M+++L+ QNF RP+ IQ +
Subjt:  GSAAYFRGWGSRGP--YDSEYEPTQPKQQ-KISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQIL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCAGAGCTCCTATCCACACTCCGGCCAACTTTCTGACCTCTCGATGTCTCGAATCGCGCCACTTAGGCCGCCATGGTTGCCTCCGCTCGCCATTTCTGAGCCAGAC
GCCACGCCCACTTCCCGCAAGCCAGCTGGTGATTGTTGGTGGTTGTGTTATCGCCGGTTACGCGCGCAAGTCGGTGGATTCTGCTGGAGTTTACCAGCTCACCGACGATG
ATGACTTTACCGTTTCTTCCTCCGATGAATTGCGTTACGATGGAGATGAGACAGTTGATGATGGAGGTATTAAGACTTCAGGCACACGGAGAAGGATATCTATTGGAAGT
TTTGGAAGATTGAAAACTCAAAAAATTAAGGCAATTGTGACAAAAGGGGCTAAGAGAAATGAAGAATTTAGAGATGATGTCCGTGTACCAACTCCTAAAAATGGGTCATC
TTATATATCTGATCGTCCACACTCTAAAGTTAAAACTCTTGGAGAAAAGAAGAGGGTAAATGCCTTAAGAAATGCAGAAAAAATTTCAAGACCATCTGAACCGCAAGATA
GAGATAGACTGAGAGCTGCCCCCAATTTATCAAGATCTGAGCAATTAGTTCCGGGAGGTTCTGCTGCTTATTTCAGAGGATGGGGCTCTAGAGGGCCCTACGATTCTGAG
TATGAACCAACCCAGCCTAAACAACAGAAGATTTCCTCTGAGAAGGGCTTTTATAGCCGAAAGTCATTTAAAGATCTTGGGTGCACTGATTATATGATTGAATCATTGAG
GCGGCAAAATTTCCTACGTCCTTCACAGATTCAGATCTTGTGGGCATCTCATTTTTTGGCAGTCAAGCCATATTCATCTGTGGTGCCTGGTGTTTTGTATTATGTATCTT
TGGTTGAAGCACAAAGTTTGGTTTTACATCTACTTATACAGGTGGATGCCAAACTTGCTCTTCGCTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MARAPIHTPANFLTSRCLESRHLGRHGCLRSPFLSQTPRPLPASQLVIVGGCVIAGYARKSVDSAGVYQLTDDDDFTVSSSDELRYDGDETVDDGGIKTSGTRRRISIGS
FGRLKTQKIKAIVTKGAKRNEEFRDDVRVPTPKNGSSYISDRPHSKVKTLGEKKRVNALRNAEKISRPSEPQDRDRLRAAPNLSRSEQLVPGGSAAYFRGWGSRGPYDSE
YEPTQPKQQKISSEKGFYSRKSFKDLGCTDYMIESLRRQNFLRPSQIQILWASHFLAVKPYSSVVPGVLYYVSLVEAQSLVLHLLIQVDAKLALR

Spg031874 (gene) of Sponge gourd (cylindrica) v1 genome