; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031892 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031892
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEF-hand domain-containing protein
Genome locationscaffold11:44830192..44831190
RNA-Seq ExpressionSpg031892
SyntenySpg031892
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023521956.1 uncharacterized calcium-binding protein At1g02270-like isoform X1 [Cucurbita pepo subsp. pepo]1.8e-2068.29Show/hide
Query:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL
        + A   +  NQL KVS+SEKD       ETNDD+IRYST CEALRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE+FL
Subjt:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL

XP_023521957.1 uncharacterized calcium-binding protein At1g02270-like isoform X2 [Cucurbita pepo subsp. pepo]1.8e-2068.29Show/hide
Query:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL
        + A   +  NQL KVS+SEKD       ETNDD+IRYST CEALRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE+FL
Subjt:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL

XP_023521958.1 uncharacterized calcium-binding protein At1g02270-like isoform X3 [Cucurbita pepo subsp. pepo]1.8e-2068.29Show/hide
Query:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL
        + A   +  NQL KVS+SEKD       ETNDD+IRYST CEALRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE+FL
Subjt:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL

XP_023538954.1 uncharacterized calcium-binding protein At1g02270-like isoform X1 [Cucurbita pepo subsp. pepo]1.8e-2068.29Show/hide
Query:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL
        + A   +  NQL KVS+SEKD       ETNDD+IRYST CEALRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE+FL
Subjt:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL

XP_023538957.1 uncharacterized calcium-binding protein At1g02270-like isoform X3 [Cucurbita pepo subsp. pepo]1.8e-2068.29Show/hide
Query:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL
        + A   +  NQL KVS+SEKD       ETNDD+IRYST CEALRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE+FL
Subjt:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL

TrEMBL top hitse value%identityAlignment
A0A067H3T8 EF-hand domain-containing protein1.5e-2055.1Show/hide
Query:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLVCSSHFLVCAVTIGNN
        + A  ++   QL+K SL+E DAFAF K + N D+I +S FCEALRQVNL   PYGLSFQE ++LW QAD+DGNG V+YEEF    +  L C+  I NN
Subjt:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLVCSSHFLVCAVTIGNN

A0A067HFC2 EF-hand domain-containing protein1.9e-2055.1Show/hide
Query:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLVCSSHFLVCAVTIGNN
        + A  ++   QL+K SL+E DAFAF K + N D+I +S FCEALRQVNL   PYGLSFQE ++LW QAD+DGNG V+YEEF     + L C+  I NN
Subjt:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLVCSSHFLVCAVTIGNN

A0A6J1IDJ2 uncharacterized calcium-binding protein At1g02270-like isoform X31.9e-2068.29Show/hide
Query:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL
        + A   +  NQL KVS+SEKD       ETNDD+IRYST CEALRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE FL
Subjt:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL

A0A6J1IFR0 uncharacterized calcium-binding protein At1g02270-like isoform X11.9e-2068.29Show/hide
Query:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL
        + A   +  NQL KVS+SEKD       ETNDD+IRYST CEALRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE FL
Subjt:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL

A0A6J1IH47 uncharacterized calcium-binding protein At1g02270-like isoform X21.9e-2068.29Show/hide
Query:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL
        + A   +  NQL KVS+SEKD       ETNDD+IRYST CEALRQVNLID PYGLSFQE +NLWTQA IDGNG  SYE FL
Subjt:  SRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFL

SwissProt top hitse value%identityAlignment
O81916 Uncharacterized calcium-binding protein At1g022703.1e-1548.72Show/hide
Query:  AAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEE
        A  ++   QL K S++E DAF FL  + + D + YS FC AL++VNL   P+GLSF+E + LW +AD+DGNG   YEE
Subjt:  AAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEE

Arabidopsis top hitse value%identityAlignment
AT1G02270.1 Calcium-binding endonuclease/exonuclease/phosphatase family2.2e-1648.72Show/hide
Query:  AAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEE
        A  ++   QL K S++E DAF FL  + + D + YS FC AL++VNL   P+GLSF+E + LW +AD+DGNG   YEE
Subjt:  AAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEE

AT4G04740.1 calcium-dependent protein kinase 239.4e-0432.29Show/hide
Query:  VSSRAAATVALNQLRK-------VSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLVCSSH
        V SR     A+N+L+K       VSLSE++         N D  R  T      Q  L      LS  E++ L   +D+DGNG + Y EF+  + H
Subjt:  VSSRAAATVALNQLRK-------VSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLVCSSH

AT5G54130.2 Calcium-binding endonuclease/exonuclease/phosphatase family3.7e-1654.29Show/hide
Query:  LRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEF
        LR+ SL+ +DAFAFLK + + D I +  FCE LRQ+NL     GL+ +E+++LWTQADIDGNG + Y+EF
Subjt:  LRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEF

AT5G54130.3 Calcium-binding endonuclease/exonuclease/phosphatase family3.8e-0552.5Show/hide
Query:  LRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLID
        LR+ SL+ +DAFAFLK + + D I +  FCE LRQV ++D
Subjt:  LRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLID

AT5G54130.4 Calcium-binding endonuclease/exonuclease/phosphatase family3.8e-0552.5Show/hide
Query:  LRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLID
        LR+ SL+ +DAFAFLK + + D I +  FCE LRQV ++D
Subjt:  LRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCGCACCACCGCCTCCTCGCGCTGCCGGTCTCATCTCGTGCCGCCGCCACCGTCGCCCTCAACCAGCTCCGAAAAGTTTCACTATCTGAAAAGGACGCTTTTGCATTTCT
TAAGGGTGAAACAAATGATGATATAATTAGATACTCAACTTTTTGTGAAGCACTTCGCCAGGTAAATTTGATTGATCGCCCTTATGGGTTGAGTTTTCAAGAAATGGAGA
ATCTGTGGACACAAGCAGACATTGATGGAAACGGTGCAGTCAGTTATGAAGAATTTCTGGTATGTTCATCACATTTCCTTGTTTGTGCGGTGACTATTGGAAACAATCAG
CCAACGGCCTTTTTTTTTTTTTTGTTCACAGTCTATGATGTCTATGAAATCTTTTGGCTTACCTACAAGGTTAATGTTTATAAGCCACGAAATGAGTGTATAGCATCGAA
AGCAAAACTTAGTTTCGTACACTACACTCTACACTCCTCATCCCGTTATAGTTGGTGA
mRNA sequenceShow/hide mRNA sequence
CCGCACCACCGCCTCCTCGCGCTGCCGGTCTCATCTCGTGCCGCCGCCACCGTCGCCCTCAACCAGCTCCGAAAAGTTTCACTATCTGAAAAGGACGCTTTTGCATTTCT
TAAGGGTGAAACAAATGATGATATAATTAGATACTCAACTTTTTGTGAAGCACTTCGCCAGGTAAATTTGATTGATCGCCCTTATGGGTTGAGTTTTCAAGAAATGGAGA
ATCTGTGGACACAAGCAGACATTGATGGAAACGGTGCAGTCAGTTATGAAGAATTTCTGGTATGTTCATCACATTTCCTTGTTTGTGCGGTGACTATTGGAAACAATCAG
CCAACGGCCTTTTTTTTTTTTTTGTTCACAGTCTATGATGTCTATGAAATCTTTTGGCTTACCTACAAGGTTAATGTTTATAAGCCACGAAATGAGTGTATAGCATCGAA
AGCAAAACTTAGTTTCGTACACTACACTCTACACTCCTCATCCCGTTATAGTTGGTGA
Protein sequenceShow/hide protein sequence
PHHRLLALPVSSRAAATVALNQLRKVSLSEKDAFAFLKGETNDDIIRYSTFCEALRQVNLIDRPYGLSFQEMENLWTQADIDGNGAVSYEEFLVCSSHFLVCAVTIGNNQ
PTAFFFFLFTVYDVYEIFWLTYKVNVYKPRNECIASKAKLSFVHYTLHSSSRYSW