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Spg031895 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031895
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase MIEL1-like
Genome locationscaffold11:38356978..38359347
RNA-Seq ExpressionSpg031895
SyntenySpg031895
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR017921 - Zinc finger, CTCHY-type
IPR037275 - Zinc finger, CTCHY-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582235.1 E3 ubiquitin-protein ligase MIEL1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2696.36Show/hide
Query:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        VARVCTNCGVNMGEYFCEICKF+DDDIEKGQFHC+DCGICRVGGRENYFHCKKCG
Subjt:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

KAG6597498.1 E3 ubiquitin-protein ligase MIEL1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2696.36Show/hide
Query:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHC+DCGICRVGG+ENYFHCKKCG
Subjt:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

KAG7028957.1 E3 ubiquitin-protein ligase MIEL1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2696.36Show/hide
Query:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHC+DCGICRVGG+ENYFHCKKCG
Subjt:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

THG08240.1 hypothetical protein TEA_010990 [Camellia sinensis var. sinensis]1.1e-2689.66Show/hide
Query:  CLQVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        C QV RVCTNCGVNMGEYFCE+CKFYDDDI+KGQFHC DCGICRVGGREN+FHCKKCG
Subjt:  CLQVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

XP_022975459.1 E3 ubiquitin-protein ligase MIEL1-like [Cucurbita maxima]1.4e-2696.36Show/hide
Query:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHC+DCGICRVGG+ENYFHCKKCG
Subjt:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

TrEMBL top hitse value%identityAlignment
A0A4S4DXU9 Uncharacterized protein5.1e-2789.66Show/hide
Query:  CLQVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        C QV RVCTNCGVNMGEYFCE+CKFYDDDI+KGQFHC DCGICRVGGREN+FHCKKCG
Subjt:  CLQVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

A0A6J1GBT3 E3 ubiquitin-protein ligase MIEL16.6e-2796.36Show/hide
Query:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHC+DCGICRVGG+ENYFHCKKCG
Subjt:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

A0A6J1GVZ6 E3 ubiquitin-protein ligase MIEL1-like6.6e-2796.36Show/hide
Query:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        VARVCTNCGVNMGEYFCEICKF+DDDIEKGQFHC+DCGICRVGGRENYFHCKKCG
Subjt:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

A0A6J1IKK3 E3 ubiquitin-protein ligase MIEL1-like6.6e-2796.36Show/hide
Query:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHC+DCGICRVGG+ENYFHCKKCG
Subjt:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

A0A6J1IS32 E3 ubiquitin-protein ligase MIEL1-like6.6e-2796.36Show/hide
Query:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        VARVCTNCGVNMGEYFCEICKF+DDDIEKGQFHC+DCGICRVGGRENYFHCKKCG
Subjt:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

SwissProt top hitse value%identityAlignment
O14099 Uncharacterized RING finger protein C2F3.161.5e-1251.72Show/hide
Query:  QVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGG--RENYFHCKKCG
        Q  + C NC   MG Y+C  CK +DDD  K  +HC DCGICR+G    ++YFHCK CG
Subjt:  QVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGG--RENYFHCKKCG

Q10LI1 E3 ubiquitin-protein ligase SRFP14.7e-2270.91Show/hide
Query:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        VA+VC NCGV MGEYFC  CKF+DDD+++  FHC+DCGICRVGG++N+FHC+KCG
Subjt:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

Q5JL96 Probable E3 ubiquitin-protein ligase RZFP349.0e-2164.29Show/hide
Query:  QVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        +V +VC +CGV MG+YFCE+CK +DDD+ K Q+HC  CGICR+GG+EN+FHC KCG
Subjt:  QVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

Q8VZK0 E3 ubiquitin-protein ligase MIEL17.8e-2585.19Show/hide
Query:  ARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        A+VC+NCGVNMGEYFC IC FYDDD EK QFHC DCGICRVGGREN+FHCKKCG
Subjt:  ARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

Q9FFB6 E3 ubiquitin-protein ligase RZFP346.4e-1964.81Show/hide
Query:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKC
        V + C+NCGV MG+YFC  CKF+DDD+ K Q+HC +CGICR GG EN+FHCK+C
Subjt:  VARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKC

Arabidopsis top hitse value%identityAlignment
AT3G62970.1 zinc finger (C3HC4-type RING finger) family protein1.6e-2576.79Show/hide
Query:  QVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        +VA+VC+NCGVNMGEYFC+ICKF+DDDI K QFHC DCGICRVGGR+ +FHC+ CG
Subjt:  QVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

AT5G18650.1 CHY-type/CTCHY-type/RING-type Zinc finger protein5.6e-2685.19Show/hide
Query:  ARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        A+VC+NCGVNMGEYFC IC FYDDD EK QFHC DCGICRVGGREN+FHCKKCG
Subjt:  ARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

AT5G25560.1 CHY-type/CTCHY-type/RING-type Zinc finger protein1.9e-2164.29Show/hide
Query:  QVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        +V ++C +CGV MG+YFC++CK YDDD  K Q+HC  CGICR+GGREN+FHC KCG
Subjt:  QVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

AT5G25560.2 CHY-type/CTCHY-type/RING-type Zinc finger protein1.9e-2164.29Show/hide
Query:  QVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        +V ++C +CGV MG+YFC++CK YDDD  K Q+HC  CGICR+GGREN+FHC KCG
Subjt:  QVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG

AT5G25560.3 CHY-type/CTCHY-type/RING-type Zinc finger protein1.9e-2164.29Show/hide
Query:  QVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG
        +V ++C +CGV MG+YFC++CK YDDD  K Q+HC  CGICR+GGREN+FHC KCG
Subjt:  QVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAATTTGCCTCCACACCATATTGCAGTTGAATTTTTTTGTTACTATTCACCACTGTTTGCAGGTCGCTCGAGTTTGTACGAACTGTGGTGTTAATATGGGGGA
GTACTTCTGTGAAATATGCAAATTCTATGATGATGATATTGAGAAGGGGCAGTTCCATTGTAAGGATTGTGGGATTTGTAGGGTTGGCGGCCGAGAAAACTATTTTCATT
GCAAGAAGTGTGGTAAATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAATTTGCCTCCACACCATATTGCAGTTGAATTTTTTTGTTACTATTCACCACTGTTTGCAGGTCGCTCGAGTTTGTACGAACTGTGGTGTTAATATGGGGGA
GTACTTCTGTGAAATATGCAAATTCTATGATGATGATATTGAGAAGGGGCAGTTCCATTGTAAGGATTGTGGGATTTGTAGGGTTGGCGGCCGAGAAAACTATTTTCATT
GCAAGAAGTGTGGTAAATCTTGA
Protein sequenceShow/hide protein sequence
MKKICLHTILQLNFFVTIHHCLQVARVCTNCGVNMGEYFCEICKFYDDDIEKGQFHCKDCGICRVGGRENYFHCKKCGKS