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Spg031909 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031909
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionhomeobox protein knotted-1-like 1
Genome locationscaffold11:45110104..45111716
RNA-Seq ExpressionSpg031909
SyntenySpg031909
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005540 - KNOX1
IPR005541 - KNOX2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596993.1 Homeobox protein knotted-1-like 2, partial [Cucurbita argyrosperma subsp. sororia]5.4e-4267.36Show/hide
Query:  MEPENNCTEEQQEQELKGLQDEE----EGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFAL
        M+  N+ T++    +L+   +EE    +G  LRRRISSHPLYGLL+ETHLNCLK GGIGE+DRGYLA DL++ ++N+I CLNTLNQSELDRFM++YC+AL
Subjt:  MEPENNCTEEQQEQELKGLQDEE----EGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFAL

Query:  SKLKEAVEESQLKSMAFINSMYSQLRELTVTSGTVKKPTTSSSS
        SKLKEA+EESQLKSMAFINSM SQLRELT T    KKPT +SSS
Subjt:  SKLKEAVEESQLKSMAFINSMYSQLRELTVTSGTVKKPTTSSSS

KAG7028461.1 Homeobox protein knotted-1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]8.4e-4368.06Show/hide
Query:  MEPENNCTEEQQEQELKGLQDEE----EGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFAL
        M+  N+ T++    +L+   +EE    +G MLRRRISSHPLYGLL+ETHLNCLK GGIGE+DRGYLA DL++ ++N+I CLNTLNQSELDRFM++YC+AL
Subjt:  MEPENNCTEEQQEQELKGLQDEE----EGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFAL

Query:  SKLKEAVEESQLKSMAFINSMYSQLRELTVTSGTVKKPTTSSSS
        SKLKEA+EESQLKSMAFINSM SQLRELT T    KKPT +SSS
Subjt:  SKLKEAVEESQLKSMAFINSMYSQLRELTVTSGTVKKPTTSSSS

XP_022137557.1 protein KNATM [Momordica charantia]2.7e-4980.15Show/hide
Query:  EQELKGLQDEE-----EGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFALSKLKEAVEESQ
        E E K LQDEE     EG +LRRRISSHPLYGLLVETHLNCLK GGIG++DRGYLATD+IKQQDN I CLNTLNQSELDRFM+TYCFALSKLKEA+EESQ
Subjt:  EQELKGLQDEE-----EGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFALSKLKEAVEESQ

Query:  LKSMAFINSMYSQLRELTVTSGTVKKPTTSSSSDTN
        +KSMAFINSM+SQLRE+  TS    KPTTSSSSDTN
Subjt:  LKSMAFINSMYSQLRELTVTSGTVKKPTTSSSSDTN

XP_022974318.1 homeobox protein KNOX3-like [Cucurbita maxima]3.2e-4268.06Show/hide
Query:  MEPENNCTEE----QQEQELKGLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFAL
        M+  N+ T++    +QE+E  G+   + G MLRRRISSHPLYGLL++THLNCLK GGIGE+DRGYLA DL++ ++N+I CLNTLNQSELDRFM++YC+AL
Subjt:  MEPENNCTEE----QQEQELKGLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFAL

Query:  SKLKEAVEESQLKSMAFINSMYSQLRELTVTSGTVKKPTTSSSS
        SKLKEA+EESQLKSMAFINSM SQLRELT T    KKPT +SSS
Subjt:  SKLKEAVEESQLKSMAFINSMYSQLRELTVTSGTVKKPTTSSSS

XP_038896017.1 homeobox protein knotted-1-like 2 [Benincasa hispida]4.0e-4572.85Show/hide
Query:  MEPENNCTEEQQEQELKGLQDEE------EGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCF
        ME EN CTEE+QE ELKGL+DE       EG MLR +IS+HPLY LLVETHLNCLK GGI        ATDLIKQQDNKI C N LNQSELDRFM+TYCF
Subjt:  MEPENNCTEEQQEQELKGLQDEE------EGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCF

Query:  ALSKLKEAVEESQLKSMAFINSMYSQLRELTVT--SGTVKKPTTSSSSDTN
        ALSKLKEA+EESQLKSMAFINSM+ QLR+LT T  + T KKPTTSSS+DTN
Subjt:  ALSKLKEAVEESQLKSMAFINSMYSQLRELTVT--SGTVKKPTTSSSSDTN

TrEMBL top hitse value%identityAlignment
A0A4P1R0C4 Uncharacterized protein2.1e-2353.24Show/hide
Query:  PENNCTEEQQEQELKGLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFALSKLKEA
        P  +  EE++EQE +G Q+EE   +L RRISSHPLYGLLVETHL CLK G I  +D         + Q  K   L    QS+LDRFM+ YC ALS+LKEA
Subjt:  PENNCTEEQQEQELKGLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFALSKLKEA

Query:  VEESQLKSMAFINSMYSQLRELTVTSGTVKKPTTSSSSD
        +EE Q KSM FIN+M+SQLRELT+ +     PT S   D
Subjt:  VEESQLKSMAFINSMYSQLRELTVTSGTVKKPTTSSSSD

A0A6J1C8K6 protein KNATM1.3e-4980.15Show/hide
Query:  EQELKGLQDEE-----EGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFALSKLKEAVEESQ
        E E K LQDEE     EG +LRRRISSHPLYGLLVETHLNCLK GGIG++DRGYLATD+IKQQDN I CLNTLNQSELDRFM+TYCFALSKLKEA+EESQ
Subjt:  EQELKGLQDEE-----EGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFALSKLKEAVEESQ

Query:  LKSMAFINSMYSQLRELTVTSGTVKKPTTSSSSDTN
        +KSMAFINSM+SQLRE+  TS    KPTTSSSSDTN
Subjt:  LKSMAFINSMYSQLRELTVTSGTVKKPTTSSSSDTN

A0A6J1G133 homeobox protein KNOX32.6e-4267.36Show/hide
Query:  MEPENNCTEEQQEQELKGLQDEE----EGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFAL
        M+  N+ T++    +L+   +EE    +G  LRRRISSHPLYGLL+ETHLNCLK GGIGE+DRGYLA DL++ ++N+I CLNTLNQSELDRFM++YC+AL
Subjt:  MEPENNCTEEQQEQELKGLQDEE----EGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFAL

Query:  SKLKEAVEESQLKSMAFINSMYSQLRELTVTSGTVKKPTTSSSS
        SKLKEA+EESQLKSMAFINSM SQLRELT T    KKPT +SSS
Subjt:  SKLKEAVEESQLKSMAFINSMYSQLRELTVTSGTVKKPTTSSSS

A0A6J1IFV6 homeobox protein KNOX3-like1.5e-4268.06Show/hide
Query:  MEPENNCTEE----QQEQELKGLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFAL
        M+  N+ T++    +QE+E  G+   + G MLRRRISSHPLYGLL++THLNCLK GGIGE+DRGYLA DL++ ++N+I CLNTLNQSELDRFM++YC+AL
Subjt:  MEPENNCTEE----QQEQELKGLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFAL

Query:  SKLKEAVEESQLKSMAFINSMYSQLRELTVTSGTVKKPTTSSSS
        SKLKEA+EESQLKSMAFINSM SQLRELT T    KKPT +SSS
Subjt:  SKLKEAVEESQLKSMAFINSMYSQLRELTVTSGTVKKPTTSSSS

A0A6P4DE57 homeobox protein knotted-1-like 11.5e-2449.31Show/hide
Query:  EPENNCTEEQQEQELKGLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDL--IKQQDNKIICLNTLNQSELDRFMKTYCFALSKL
        + E  C EE++E+E +   DE+   +L+RRIS+HPLYGLLVE HL CLK G I  +DR      +  +KQQ+     LN  +QSELD FM+ YC AL KL
Subjt:  EPENNCTEEQQEQELKGLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDL--IKQQDNKIICLNTLNQSELDRFMKTYCFALSKL

Query:  KEAVEESQLKSMAFINSMYSQLRELTVTSGTVKKPTTSSSSDTN
        K+A+EE Q KSMAFIN+M+SQLRELT  +  +  P+ +S + ++
Subjt:  KEAVEESQLKSMAFINSMYSQLRELTVTSGTVKKPTTSSSSDTN

SwissProt top hitse value%identityAlignment
F4HXU3 Protein KNATM1.1e-0537.11Show/hide
Query:  ENNCTEEQQEQELKGLQDE--EEGAMLRRRISSHPLYGLLVETHLNCLK--GGGIGEVDRGYLATDL-IKQQDNKIICLNTLNQSELDRFMKTYCFA
        EN+  E  +++    L++E  EE  +L++RISSHPLYGLL+ +HLNCLK   G     +    A DL + +        +    SELD+FM  + F+
Subjt:  ENNCTEEQQEQELKGLQDE--EEGAMLRRRISSHPLYGLLVETHLNCLK--GGGIGEVDRGYLATDL-IKQQDNKIICLNTLNQSELDRFMKTYCFA

P46640 Homeobox protein knotted-1-like 29.4e-0528.03Show/hide
Query:  LKGLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEV----DRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFALSKLKEAVEESQLKSM
        ++  +D    ++++ +I+SHPLY  L++T+++C K G   E+    +       + K+    + C       ELD FM+TYC  L K K  +     ++ 
Subjt:  LKGLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEV----DRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFALSKLKEAVEESQLKSM

Query:  AFINSMYSQLRELTV--TSGTVKKPTTSSSSD
         FIN +  QL+ L     S T      + SSD
Subjt:  AFINSMYSQLRELTV--TSGTVKKPTTSSSSD

Q75LX9 Putative homeobox protein knotted-1-like 54.2e-0527.19Show/hide
Query:  GLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGG----IGEVDRGYLATDLIKQQDNKII-CLNTLNQSELDRFMKTYCFALSKLKEAVEESQLKSMA
        GLQ  E  AM++ +I SHPLY  L+   ++C K G     +G +    + TD+ +   ++ +         ELD+FM+TYC+ L++  + +     ++  
Subjt:  GLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGG----IGEVDRGYLATDLIKQQDNKII-CLNTLNQSELDRFMKTYCFALSKLKEAVEESQLKSMA

Query:  FINSMYSQLRELTV
        F   +  Q+  L +
Subjt:  FINSMYSQLRELTV

Arabidopsis top hitse value%identityAlignment
AT1G14760.1 KNOX Arabidopsis thaliana meinox7.9e-0737.11Show/hide
Query:  ENNCTEEQQEQELKGLQDE--EEGAMLRRRISSHPLYGLLVETHLNCLK--GGGIGEVDRGYLATDL-IKQQDNKIICLNTLNQSELDRFMKTYCFA
        EN+  E  +++    L++E  EE  +L++RISSHPLYGLL+ +HLNCLK   G     +    A DL + +        +    SELD+FM  + F+
Subjt:  ENNCTEEQQEQELKGLQDE--EEGAMLRRRISSHPLYGLLVETHLNCLK--GGGIGEVDRGYLATDL-IKQQDNKIICLNTLNQSELDRFMKTYCFA

AT1G14760.2 KNOX Arabidopsis thaliana meinox1.3e-1436.92Show/hide
Query:  ENNCTEEQQEQELKGLQDE--EEGAMLRRRISSHPLYGLLVETHLNCLK--GGGIGEVDRGYLATDL-IKQQDNKIICLNTLNQSELDRFMKTYCFALSK
        EN+  E  +++    L++E  EE  +L++RISSHPLYGLL+ +HLNCLK   G     +    A DL + +        +    SELD+FM+ YC  L +
Subjt:  ENNCTEEQQEQELKGLQDE--EEGAMLRRRISSHPLYGLLVETHLNCLK--GGGIGEVDRGYLATDL-IKQQDNKIICLNTLNQSELDRFMKTYCFALSK

Query:  LKEAVEESQLKSMAFINSMYSQLRELTVTS
        LKEA+E+   ++  F++++Y+QL ++ ++S
Subjt:  LKEAVEESQLKSMAFINSMYSQLRELTVTS

AT1G14760.3 KNOX Arabidopsis thaliana meinox1.9e-0829.92Show/hide
Query:  ENNCTEEQQEQELKGLQDE--EEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFALSKLKE
        EN+  E  +++    L++E  EE  +L++RISSHPLYGLL+ +HLNCLK                                       + YC  L +LKE
Subjt:  ENNCTEEQQEQELKGLQDE--EEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFALSKLKE

Query:  AVEESQLKSMAFINSMYSQLRELTVTS
        A+E+   ++  F++++Y+QL ++ ++S
Subjt:  AVEESQLKSMAFINSMYSQLRELTVTS

AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 26.7e-0628.03Show/hide
Query:  LKGLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEV----DRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFALSKLKEAVEESQLKSM
        ++  +D    ++++ +I+SHPLY  L++T+++C K G   E+    +       + K+    + C       ELD FM+TYC  L K K  +     ++ 
Subjt:  LKGLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEV----DRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFALSKLKEAVEESQLKSM

Query:  AFINSMYSQLRELTV--TSGTVKKPTTSSSSD
         FIN +  QL+ L     S T      + SSD
Subjt:  AFINSMYSQLRELTV--TSGTVKKPTTSSSSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCTGAGAACAATTGTACAGAAGAACAACAAGAGCAAGAACTAAAAGGGCTACAAGACGAAGAGGAAGGAGCAATGCTGCGCAGGAGAATTTCCAGCCACCCCTT
ATATGGGCTGTTAGTTGAGACTCACCTCAACTGTTTGAAGGGTGGAGGTATAGGTGAAGTGGACAGAGGCTACTTAGCTACGGATTTGATCAAACAGCAAGATAACAAGA
TCATATGCTTAAACACGCTTAACCAATCAGAGCTAGATCGCTTCATGAAAACCTATTGCTTTGCATTGAGCAAGCTGAAAGAAGCAGTGGAGGAGTCTCAGTTGAAATCA
ATGGCATTCATAAACAGCATGTACTCGCAATTAAGGGAGCTCACGGTCACTAGTGGGACAGTCAAGAAACCCACCACCTCATCTTCTAGTGACACAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCTGAGAACAATTGTACAGAAGAACAACAAGAGCAAGAACTAAAAGGGCTACAAGACGAAGAGGAAGGAGCAATGCTGCGCAGGAGAATTTCCAGCCACCCCTT
ATATGGGCTGTTAGTTGAGACTCACCTCAACTGTTTGAAGGGTGGAGGTATAGGTGAAGTGGACAGAGGCTACTTAGCTACGGATTTGATCAAACAGCAAGATAACAAGA
TCATATGCTTAAACACGCTTAACCAATCAGAGCTAGATCGCTTCATGAAAACCTATTGCTTTGCATTGAGCAAGCTGAAAGAAGCAGTGGAGGAGTCTCAGTTGAAATCA
ATGGCATTCATAAACAGCATGTACTCGCAATTAAGGGAGCTCACGGTCACTAGTGGGACAGTCAAGAAACCCACCACCTCATCTTCTAGTGACACAAACTGA
Protein sequenceShow/hide protein sequence
MEPENNCTEEQQEQELKGLQDEEEGAMLRRRISSHPLYGLLVETHLNCLKGGGIGEVDRGYLATDLIKQQDNKIICLNTLNQSELDRFMKTYCFALSKLKEAVEESQLKS
MAFINSMYSQLRELTVTSGTVKKPTTSSSSDTN