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Spg031935 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031935
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA binding protein
Genome locationscaffold11:36531170..36532187
RNA-Seq ExpressionSpg031935
SyntenySpg031935
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052155.1 uncharacterized protein E6C27_scaffold1589G00250 [Cucumis melo var. makuwa]2.0e-3294.59Show/hide
Query:  MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD
        MQEDEEILCPGMEPLDAYENDLIDYEDG+S+GRKGCLQLVGLTDV+TLDVNPANGGASTDNDADVKFYD+ELSD
Subjt:  MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD

XP_008438995.1 PREDICTED: uncharacterized protein LOC103483923 [Cucumis melo]2.6e-3293.24Show/hide
Query:  MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD
        MQEDEEILCPGMEPLDAYENDLIDYEDG+S+GRKGCLQLVGLTD++TLDVNPANGGASTDNDADVKFYD+ELSD
Subjt:  MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD

XP_011651096.1 uncharacterized protein LOC101213851 [Cucumis sativus]3.1e-3397.3Show/hide
Query:  MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD
        MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDV+TLDVNPANGGASTDNDADVKFYD+ELSD
Subjt:  MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD

XP_022137898.1 uncharacterized protein LOC111009208 isoform X1 [Momordica charantia]4.5e-3297.33Show/hide
Query:  MQEDEEILCPGMEPLDAYENDLIDYEDGTS-EGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD
        MQEDEEILCPGMEPLDAYENDLIDYEDGTS EGRKGCLQLV LTDVETLDVNPANGGASTDNDADVKFYDDELSD
Subjt:  MQEDEEILCPGMEPLDAYENDLIDYEDGTS-EGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD

XP_022137900.1 uncharacterized protein LOC111009208 isoform X2 [Momordica charantia]4.5e-3297.33Show/hide
Query:  MQEDEEILCPGMEPLDAYENDLIDYEDGTS-EGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD
        MQEDEEILCPGMEPLDAYENDLIDYEDGTS EGRKGCLQLV LTDVETLDVNPANGGASTDNDADVKFYDDELSD
Subjt:  MQEDEEILCPGMEPLDAYENDLIDYEDGTS-EGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD

TrEMBL top hitse value%identityAlignment
A0A0A0L859 Uncharacterized protein1.5e-3397.3Show/hide
Query:  MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD
        MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDV+TLDVNPANGGASTDNDADVKFYD+ELSD
Subjt:  MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD

A0A1S3AXN6 uncharacterized protein LOC1034839231.3e-3293.24Show/hide
Query:  MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD
        MQEDEEILCPGMEPLDAYENDLIDYEDG+S+GRKGCLQLVGLTD++TLDVNPANGGASTDNDADVKFYD+ELSD
Subjt:  MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD

A0A5A7UEM6 Uncharacterized protein9.8e-3394.59Show/hide
Query:  MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD
        MQEDEEILCPGMEPLDAYENDLIDYEDG+S+GRKGCLQLVGLTDV+TLDVNPANGGASTDNDADVKFYD+ELSD
Subjt:  MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD

A0A6J1CBM4 uncharacterized protein LOC111009208 isoform X22.2e-3297.33Show/hide
Query:  MQEDEEILCPGMEPLDAYENDLIDYEDGTS-EGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD
        MQEDEEILCPGMEPLDAYENDLIDYEDGTS EGRKGCLQLV LTDVETLDVNPANGGASTDNDADVKFYDDELSD
Subjt:  MQEDEEILCPGMEPLDAYENDLIDYEDGTS-EGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD

E5GC38 DNA binding protein1.3e-3293.24Show/hide
Query:  MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD
        MQEDEEILCPGMEPLDAYENDLIDYEDG+S+GRKGCLQLVGLTD++TLDVNPANGGASTDNDADVKFYD+ELSD
Subjt:  MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAAGATGAGGAAATCCTTTGTCCTGGAATGGAGCCACTCGATGCATATGAGAATGATTTGATTGACTATGAGGACGGGACTTCAGAGGGCCGGAAGGGCTGTCT
TCAACTGGTTGGTTTGACTGATGTAGAAACATTGGATGTCAATCCCGCCAATGGAGGCGCTTCCACGGACAATGATGCCGATGTTAAGTTCTATGATGATGAGCTAAGCG
ATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAAGATGAGGAAATCCTTTGTCCTGGAATGGAGCCACTCGATGCATATGAGAATGATTTGATTGACTATGAGGACGGGACTTCAGAGGGCCGGAAGGGCTGTCT
TCAACTGGTTGGTTTGACTGATGTAGAAACATTGGATGTCAATCCCGCCAATGGAGGCGCTTCCACGGACAATGATGCCGATGTTAAGTTCTATGATGATGAGCTAAGCG
ATTAA
Protein sequenceShow/hide protein sequence
MQEDEEILCPGMEPLDAYENDLIDYEDGTSEGRKGCLQLVGLTDVETLDVNPANGGASTDNDADVKFYDDELSD