; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg031976 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031976
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEthylene-responsive transcription factor, putative
Genome locationscaffold11:44930745..44932751
RNA-Seq ExpressionSpg031976
SyntenySpg031976
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily
IPR044808 - Ethylene-responsive transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5381364.1 hypothetical protein IGI04_032834 [Brassica rapa subsp. trilocularis]2.3e-2758.2Show/hide
Query:  SSSEILEWIRQHLLEENDTD-TEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAY
        + S +L+WIR+ LLEE+D D T + S+A          TDS+S+S+S     G     T+KGVRRRPWGKYAAEIRDP +NGAR WLGT++TP +A +AY
Subjt:  SSSEILEWIRQHLLEENDTD-TEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAY

Query:  DRAAFKLRGAKAKLNFPHLIHS
        D+AAFK+RG+KAKLNFPHLI S
Subjt:  DRAAFKLRGAKAKLNFPHLIHS

RID43140.1 hypothetical protein BRARA_I00021 [Brassica rapa]2.3e-2758.2Show/hide
Query:  SSSEILEWIRQHLLEENDTD-TEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAY
        + S +L+WIR+ LLEE+D D T + S+A          TDS+S+S+S     G     T+KGVRRRPWGKYAAEIRDP +NGAR WLGT++TP +A +AY
Subjt:  SSSEILEWIRQHLLEENDTD-TEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAY

Query:  DRAAFKLRGAKAKLNFPHLIHS
        D+AAFK+RG+KAKLNFPHLI S
Subjt:  DRAAFKLRGAKAKLNFPHLIHS

XP_006282733.1 ethylene-responsive transcription factor 13 [Capsella rubella]1.4e-2746.47Show/hide
Query:  SSSSEILEWIRQHLLEENDTDTEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAY
        ++ S +L+WIR+ LLEE++ D  A+   V       +E DS+S+S+S ++    G    +KGVRRRPWGKYAAEIRDP +NGAR WLGT++T  +A +AY
Subjt:  SSSSEILEWIRQHLLEENDTDTEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAY

Query:  DRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNRS---TISSAKGNESIERLQSQTNKGCEVS
        D+AAFK+RG+KAKLNFPHLI   C     P+  +  +KR RS      +AK    I    S  + G E+S
Subjt:  DRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNRS---TISSAKGNESIERLQSQTNKGCEVS

XP_022151925.1 ethylene-responsive transcription factor 14-like [Momordica charantia]2.8e-2855.7Show/hide
Query:  MSSSSSEILEWIRQHLLEEN-DTDTEAASVAVIHSQIVDDETDSTSTSASDQIGN-----GTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDT
        MSS   ++LEWIR+HLLEE  D D + A+          +   + + +++ ++G      G G Q  FKGVRRRPWGKYAAEIRDP R GARTWLGTF T
Subjt:  MSSSSSEILEWIRQHLLEEN-DTDTEAASVAVIHSQIVDDETDSTSTSASDQIGN-----GTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDT

Query:  PRDATLAYDRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNR
          DA LAYDRAAFK+RGAKAKLNFPHLI SN    P  L  +T NKR R
Subjt:  PRDATLAYDRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNR

XP_038907088.1 ethylene-responsive transcription factor 13-like [Benincasa hispida]2.8e-2855.78Show/hide
Query:  SEILEWIRQHLLEENDT--------DTEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRD
        S++LE IRQHLLEEN++          E++S   IH           + + +    NG  +   FKGVRRRPWGKYA EIRDPKRNGARTWLGTFDT +D
Subjt:  SEILEWIRQHLLEENDT--------DTEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRD

Query:  ATLAYDRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNRS
        A LAYDRAAF++RGAKAKLNFPHLI S+     +   TSTS KR RS
Subjt:  ATLAYDRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNRS

TrEMBL top hitse value%identityAlignment
A0A397XXB5 AP2/ERF domain-containing protein1.1e-2758.2Show/hide
Query:  SSSEILEWIRQHLLEENDTD-TEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAY
        + S +L+WIR+ LLEE+D D T + S+A          TDS+S+S+S     G     T+KGVRRRPWGKYAAEIRDP +NGAR WLGT++TP +A +AY
Subjt:  SSSEILEWIRQHLLEENDTD-TEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAY

Query:  DRAAFKLRGAKAKLNFPHLIHS
        D+AAFK+RG+KAKLNFPHLI S
Subjt:  DRAAFKLRGAKAKLNFPHLIHS

A0A3P6DX05 Peptide deformylase4.8e-2651.41Show/hide
Query:  SSSEILEWIRQHLLEENDTD-TEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAY
        + S +L+WIR+ LLE++D D T + S+A          TDS+S+S+S     G     T+KGVRRRPWGKYAAEIRDP +NG R WLGT++TP +A +AY
Subjt:  SSSEILEWIRQHLLEENDTD-TEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAY

Query:  DRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNRS
        D+AAFK+RG+KA LNFPHLI S+        +++  NKR RS
Subjt:  DRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNRS

A0A5A7TYW8 Ethylene-responsive transcription factor 13-like4.8e-2659.66Show/hide
Query:  SEILEWIRQHLLEENDTDTEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRA
        S++LE IRQHLL+EN   +       I S I D    + +                FKGVRRRPWGKYAAEIRDPKRNGARTWLGTF+T ++A LAYDRA
Subjt:  SEILEWIRQHLLEENDTDTEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRA

Query:  AFKLRGAKAKLNFPHLIHS
        AFK+RGAKAKLNFPHLI S
Subjt:  AFKLRGAKAKLNFPHLIHS

A0A6J1DCJ3 ethylene-responsive transcription factor 14-like1.3e-2855.7Show/hide
Query:  MSSSSSEILEWIRQHLLEEN-DTDTEAASVAVIHSQIVDDETDSTSTSASDQIGN-----GTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDT
        MSS   ++LEWIR+HLLEE  D D + A+          +   + + +++ ++G      G G Q  FKGVRRRPWGKYAAEIRDP R GARTWLGTF T
Subjt:  MSSSSSEILEWIRQHLLEEN-DTDTEAASVAVIHSQIVDDETDSTSTSASDQIGN-----GTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDT

Query:  PRDATLAYDRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNR
          DA LAYDRAAFK+RGAKAKLNFPHLI SN    P  L  +T NKR R
Subjt:  PRDATLAYDRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNR

R0F2S3 AP2/ERF domain-containing protein6.6e-2846.47Show/hide
Query:  SSSSEILEWIRQHLLEENDTDTEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAY
        ++ S +L+WIR+ LLEE++ D  A+   V       +E DS+S+S+S ++    G    +KGVRRRPWGKYAAEIRDP +NGAR WLGT++T  +A +AY
Subjt:  SSSSEILEWIRQHLLEENDTDTEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAY

Query:  DRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNRS---TISSAKGNESIERLQSQTNKGCEVS
        D+AAFK+RG+KAKLNFPHLI   C     P+  +  +KR RS      +AK    I    S  + G E+S
Subjt:  DRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNRS---TISSAKGNESIERLQSQTNKGCEVS

SwissProt top hitse value%identityAlignment
O80337 Ethylene-responsive transcription factor 1A1.3e-2056.04Show/hide
Query:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNRSTISSAKGN
        ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+T  DA LAYDRAAF++RG++A LNFP  ++S     P+P+      K  RS+ SS+  N
Subjt:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNRSTISSAKGN

O80338 Ethylene-responsive transcription factor 22.2e-2043.65Show/hide
Query:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHSNCALLPNPL----LTSTSNKRNRSTISSAKGNESIER
        ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+T  DA LAYD AAF++RG++A LNFP  ++S     P+P+      S+S+  + S+ +S+  N  ++R
Subjt:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHSNCALLPNPL----LTSTSNKRNRSTISSAKGNESIER

Query:  LQSQTNKGCE-VSYTMHSGDPSKMED
         +   N   E V      GD +++++
Subjt:  LQSQTNKGCE-VSYTMHSGDPSKMED

Q40476 Ethylene-responsive transcription factor 14.4e-2146.72Show/hide
Query:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHSN----------CALLPNPLLTS--TSNKRNRSTISSA
        ++GVRRRPWGK+AAEIRDP +NGAR WLGT++T  +A +AYD+AA+++RG+KA LNFPH I  N              P P  +S  +S KR R  +++ 
Subjt:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHSN----------CALLPNPLLTS--TSNKRNRSTISSA

Query:  KGNESIERLQSQTN---KGCEV
        K +E++E ++S++N    GC+V
Subjt:  KGNESIERLQSQTN---KGCEV

Q40479 Ethylene-responsive transcription factor 21.7e-2042.28Show/hide
Query:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHSN---------CALLPNPLLTSTSN-------KRNRST
        ++GVR+RPWGK+AAEIRDP +NGAR WLGT++T  +A LAYD+AA+++RG+KA LNFPH I  N             P P  +S S+       KR R  
Subjt:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHSN---------CALLPNPLLTSTSN-------KRNRST

Query:  ISSAKGNESIERLQSQTNKGCEV
        +++ K    ++   +    GC++
Subjt:  ISSAKGNESIERLQSQTNKGCEV

Q8L9K1 Ethylene-responsive transcription factor 131.1e-2479.37Show/hide
Query:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHS
        ++GVRRRPWGK+AAEIRDPK+NGAR WLGT++TP DA +AYDRAAF+LRG+KAKLNFPHLI S
Subjt:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHS

Arabidopsis top hitse value%identityAlignment
AT1G04370.1 Ethylene-responsive element binding factor 142.0e-2166.18Show/hide
Query:  GNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPH
        G G  EQ  ++GVRRRPWGKYAAEIRD +++G R WLGTFDT  DA  AYDRAA+ +RG  A LNFPH
Subjt:  GNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPH

AT2G44840.1 ethylene-responsive element binding factor 138.0e-2679.37Show/hide
Query:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHS
        ++GVRRRPWGK+AAEIRDPK+NGAR WLGT++TP DA +AYDRAAF+LRG+KAKLNFPHLI S
Subjt:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHS

AT3G23230.1 Integrase-type DNA-binding superfamily protein3.9e-2051.4Show/hide
Query:  DSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIH---SNCALLPNPLLTSTS
        +S++ S+++Q  +   +Q  F+GVRRRPWGK+AAEIRDP RNGAR WLGTF+T  +A  AYDRAAF LRG  A LNFP+  +    + +L P P  +S+S
Subjt:  DSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIH---SNCALLPNPLLTSTS

Query:  NKRNRST
        +  + ST
Subjt:  NKRNRST

AT4G17500.1 ethylene responsive element binding factor 19.2e-2256.04Show/hide
Query:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNRSTISSAKGN
        ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+T  DA LAYDRAAF++RG++A LNFP  ++S     P+P+      K  RS+ SS+  N
Subjt:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNRSTISSAKGN

AT5G47220.1 ethylene responsive element binding factor 21.6e-2143.65Show/hide
Query:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHSNCALLPNPL----LTSTSNKRNRSTISSAKGNESIER
        ++GVR+RPWGK+AAEIRDP +NGAR WLGTF+T  DA LAYD AAF++RG++A LNFP  ++S     P+P+      S+S+  + S+ +S+  N  ++R
Subjt:  FKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLRGAKAKLNFPHLIHSNCALLPNPL----LTSTSNKRNRSTISSAKGNESIER

Query:  LQSQTNKGCE-VSYTMHSGDPSKMED
         +   N   E V      GD +++++
Subjt:  LQSQTNKGCE-VSYTMHSGDPSKMED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGTCGTCGTCCGAAATCTTGGAGTGGATCCGTCAACATCTTCTGGAAGAAAATGATACGGATACGGAAGCAGCATCAGTAGCTGTGATCCATTCCCAGATTGT
TGATGATGAAACCGACAGTACAAGTACTAGTGCTTCAGATCAGATTGGAAATGGAACAGGAGAGCAATGGACCTTCAAGGGAGTGAGGCGGAGGCCATGGGGCAAATACG
CGGCGGAGATTAGAGATCCAAAGAGAAACGGAGCCAGAACCTGGCTTGGGACTTTTGATACGCCCCGAGATGCAACTTTGGCTTACGATCGAGCCGCTTTCAAACTCCGA
GGAGCTAAGGCTAAGCTCAACTTTCCTCATCTCATTCATTCTAACTGCGCCCTTCTTCCAAATCCACTACTCACTTCTACTTCTAATAAGCGTAATAGATCAACAATTTC
ATCGGCAAAAGGAAATGAATCAATAGAAAGGTTGCAATCTCAAACGAACAAAGGATGTGAGGTGTCATATACCATGCATAGTGGGGATCCCTCAAAGATGGAGGATCCCC
AAGGCTCAGCAATCGTTCTTGCACCTCTCCTCTTGCCCGCTCGCAATTATCCTACTCATCAATGTGAGTCACTTGATGAGGATATCGTGTTTCTGGGCAACTCTTTGGTT
TCTCCAAAGGCAAAGATACAAACTATTGTTTCTTCTTCTTTTGAGGCATATATTGTGCATTTGCACATGTTATTTAGTCGTGAGCTAAAGGCACCTGTACGTTTGATTCG
ATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCGTCGTCGTCCGAAATCTTGGAGTGGATCCGTCAACATCTTCTGGAAGAAAATGATACGGATACGGAAGCAGCATCAGTAGCTGTGATCCATTCCCAGATTGT
TGATGATGAAACCGACAGTACAAGTACTAGTGCTTCAGATCAGATTGGAAATGGAACAGGAGAGCAATGGACCTTCAAGGGAGTGAGGCGGAGGCCATGGGGCAAATACG
CGGCGGAGATTAGAGATCCAAAGAGAAACGGAGCCAGAACCTGGCTTGGGACTTTTGATACGCCCCGAGATGCAACTTTGGCTTACGATCGAGCCGCTTTCAAACTCCGA
GGAGCTAAGGCTAAGCTCAACTTTCCTCATCTCATTCATTCTAACTGCGCCCTTCTTCCAAATCCACTACTCACTTCTACTTCTAATAAGCGTAATAGATCAACAATTTC
ATCGGCAAAAGGAAATGAATCAATAGAAAGGTTGCAATCTCAAACGAACAAAGGATGTGAGGTGTCATATACCATGCATAGTGGGGATCCCTCAAAGATGGAGGATCCCC
AAGGCTCAGCAATCGTTCTTGCACCTCTCCTCTTGCCCGCTCGCAATTATCCTACTCATCAATGTGAGTCACTTGATGAGGATATCGTGTTTCTGGGCAACTCTTTGGTT
TCTCCAAAGGCAAAGATACAAACTATTGTTTCTTCTTCTTTTGAGGCATATATTGTGCATTTGCACATGTTATTTAGTCGTGAGCTAAAGGCACCTGTACGTTTGATTCG
ATGA
Protein sequenceShow/hide protein sequence
MSSSSSEILEWIRQHLLEENDTDTEAASVAVIHSQIVDDETDSTSTSASDQIGNGTGEQWTFKGVRRRPWGKYAAEIRDPKRNGARTWLGTFDTPRDATLAYDRAAFKLR
GAKAKLNFPHLIHSNCALLPNPLLTSTSNKRNRSTISSAKGNESIERLQSQTNKGCEVSYTMHSGDPSKMEDPQGSAIVLAPLLLPARNYPTHQCESLDEDIVFLGNSLV
SPKAKIQTIVSSSFEAYIVHLHMLFSRELKAPVRLIR