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Spg031992 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031992
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionlate embryogenesis abundant protein 6-like
Genome locationscaffold11:42343236..42344612
RNA-Seq ExpressionSpg031992
SyntenySpg031992
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134355.1 late embryogenesis abundant protein 6 [Cucumis sativus]5.0e-3880.99Show/hide
Query:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGTT-----DMAAAPDVTI
        MQAVREKLHD+SVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYAD+HT  FV+PGGTT      +  AP +T+
Subjt:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGTT-----DMAAAPDVTI

Query:  IGAPGTVDMAGPPH--SKKLL
        +GAPGTVDMAG P   +KKLL
Subjt:  IGAPGTVDMAGPPH--SKKLL

XP_008438228.1 PREDICTED: uncharacterized protein LOC103483397 [Cucumis melo]2.5e-3778.86Show/hide
Query:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGT-------TDMAAAPDV
        MQAV+EKLHD+SVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYAD+HT  FVAPGGT        ++  AP +
Subjt:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGT-------TDMAAAPDV

Query:  TIIGAPGTVDMAGPPH--SKKLL
        T++GAPGTVDMAG P   +KKLL
Subjt:  TIIGAPGTVDMAGPPH--SKKLL

XP_022147095.1 late embryogenesis abundant protein 6-like [Momordica charantia]1.2e-3680.87Show/hide
Query:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGTTDMAAAP-DVTIIGAP
        MQAV++KLHD+S MRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAG KAE+EMAKYA +H T FVAPGGTT++AAAP DVT++G P
Subjt:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGTTDMAAAP-DVTIIGAP

Query:  GTVDMAGPPHSKKLL
        GTVDM G    KK+L
Subjt:  GTVDMAGPPHSKKLL

XP_022924652.1 late embryogenesis abundant protein 6-like [Cucurbita moschata]2.5e-3477.78Show/hide
Query:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGG--TTDMAAAPDVTIIGA
        MQAVR+KLHDI+ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A++HT  FVAPG   TT++A AP VT++GA
Subjt:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGG--TTDMAAAPDVTIIGA

Query:  PGTVDMAGP--PHSKKL
        PGTVDMAGP   H K L
Subjt:  PGTVDMAGP--PHSKKL

XP_038878054.1 late embryogenesis abundant protein 6-like [Benincasa hispida]5.0e-3881.82Show/hide
Query:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGG------TTDMAAAPDVT
        MQAV++KLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEM KYA++HT  FVAPGG      T DMA AP VT
Subjt:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGG------TTDMAAAPDVT

Query:  IIGAPGTVDMAG-PPHSKKLL
        I+ APGTV+MAG PP +KKLL
Subjt:  IIGAPGTVDMAG-PPHSKKLL

TrEMBL top hitse value%identityAlignment
A0A0A0L6I7 Uncharacterized protein2.4e-3880.99Show/hide
Query:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGTT-----DMAAAPDVTI
        MQAVREKLHD+SVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYAD+HT  FV+PGGTT      +  AP +T+
Subjt:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGTT-----DMAAAPDVTI

Query:  IGAPGTVDMAGPPH--SKKLL
        +GAPGTVDMAG P   +KKLL
Subjt:  IGAPGTVDMAGPPH--SKKLL

A0A1S3AWI7 uncharacterized protein LOC1034833971.2e-3778.86Show/hide
Query:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGT-------TDMAAAPDV
        MQAV+EKLHD+SVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYAD+HT  FVAPGGT        ++  AP +
Subjt:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGT-------TDMAAAPDV

Query:  TIIGAPGTVDMAGPPH--SKKLL
        T++GAPGTVDMAG P   +KKLL
Subjt:  TIIGAPGTVDMAGPPH--SKKLL

A0A5A7U624 Late embryogenesis abundant protein1.2e-3778.86Show/hide
Query:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGT-------TDMAAAPDV
        MQAV+EKLHD+SVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYAD+HT  FVAPGGT        ++  AP +
Subjt:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGT-------TDMAAAPDV

Query:  TIIGAPGTVDMAGPPH--SKKLL
        T++GAPGTVDMAG P   +KKLL
Subjt:  TIIGAPGTVDMAGPPH--SKKLL

A0A6J1CZ67 late embryogenesis abundant protein 6-like5.9e-3780.87Show/hide
Query:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGTTDMAAAP-DVTIIGAP
        MQAV++KLHD+S MRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAG KAE+EMAKYA +H T FVAPGGTT++AAAP DVT++G P
Subjt:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGTTDMAAAP-DVTIIGAP

Query:  GTVDMAGPPHSKKLL
        GTVDM G    KK+L
Subjt:  GTVDMAGPPHSKKLL

A0A6J1ED39 late embryogenesis abundant protein 6-like1.2e-3477.78Show/hide
Query:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGG--TTDMAAAPDVTIIGA
        MQAVR+KLHDI+ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A++HT  FVAPG   TT++A AP VT++GA
Subjt:  MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGG--TTDMAAAPDVTIIGA

Query:  PGTVDMAGP--PHSKKL
        PGTVDMAGP   H K L
Subjt:  PGTVDMAGP--PHSKKL

SwissProt top hitse value%identityAlignment
Q39138 Late embryogenesis abundant protein 61.4e-0645.12Show/hide
Query:  MQAVREKLHDISVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTD
        MQ+ ++K+ D++   K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA MD+H+AKA    +K MAK +  H TD
Subjt:  MQAVREKLHDISVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTD

Arabidopsis top hitse value%identityAlignment
AT1G32560.1 Late embryogenesis abundant protein, group 1 protein9.7e-0845.12Show/hide
Query:  MQAVREKLHDISVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTD
        MQ+ ++K+ D++   K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA MD+H+AKA    +K MAK +  H TD
Subjt:  MQAVREKLHDISVMRKAK---AEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCTGTCAGGGAGAAACTCCACGACATCAGCGTCATGCGCAAGGCTAAGGCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAGGCAAGAGTGGA
GGTGGCTCATGAGGTAAGATTGGCAAGAGAGGCTGAAGCTGCAATGGATCTTCATGTGGCCAAAGCTGGAATGAAGGCTGAGAAAGAAATGGCTAAGTATGCCGATTCTC
ACACCACTGACTTTGTGGCTCCCGGCGGCACCACCGACATGGCCGCAGCTCCCGACGTGACTATAATCGGAGCCCCGGGCACCGTCGACATGGCTGGACCTCCTCACTCT
AAGAAGTTACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCTGTCAGGGAGAAACTCCACGACATCAGCGTCATGCGCAAGGCTAAGGCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAGGCAAGAGTGGA
GGTGGCTCATGAGGTAAGATTGGCAAGAGAGGCTGAAGCTGCAATGGATCTTCATGTGGCCAAAGCTGGAATGAAGGCTGAGAAAGAAATGGCTAAGTATGCCGATTCTC
ACACCACTGACTTTGTGGCTCCCGGCGGCACCACCGACATGGCCGCAGCTCCCGACGTGACTATAATCGGAGCCCCGGGCACCGTCGACATGGCTGGACCTCCTCACTCT
AAGAAGTTACTGTAA
Protein sequenceShow/hide protein sequence
MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYADSHTTDFVAPGGTTDMAAAPDVTIIGAPGTVDMAGPPHS
KKLL