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Spg031995 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg031995
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA replication ATP-dependent helicase/nuclease DNA2
Genome locationscaffold11:41813879..41821922
RNA-Seq ExpressionSpg031995
SyntenySpg031995
Gene Ontology termsGO:0043170 - macromolecule metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR045055 - DNA2/NAM7-like helicase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018906.1 DNA replication ATP-dependent helicase/nuclease DNA2, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-2747.95Show/hide
Query:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLNDSCCEG--------------SVDGRCNCFNNFLSFKFSLDRDALLFVT--
        FNLVQL LQGEQN HLRKLIVDL APRFD GCIF QDPAISYIWSE NLND                    + G         + K  L R   + +T  
Subjt:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLNDSCCEG--------------SVDGRCNCFNNFLSFKFSLDRDALLFVT--

Query:  ------------------GKMFFDRVEHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS
                          G + F          +Q   L +STEARENG GISLFCRLSEAHP+AISALQS
Subjt:  ------------------GKMFFDRVEHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS

OWM91537.1 hypothetical protein CDL15_Pgr024861 [Punica granatum]2.2e-2242.69Show/hide
Query:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLNDSCCEG--------------SVDGRCNCFNNFLSFKFSLDRDALLFVTG-
        FNL+QLFL+   + HLR++IVDL APRFD GCIF QDPAISY+WSE NLND                    + G         + K  L R A + +T  
Subjt:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLNDSCCEG--------------SVDGRCNCFNNFLSFKFSLDRDALLFVTG-

Query:  ------KMFFDRVEHTKCG-------------RHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS
               +     +    G              +Q   L KS EA+ENG GISLFCRLSEAHP+AISALQS
Subjt:  ------KMFFDRVEHTKCG-------------RHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS

TYK17472.1 DNA replication ATP-dependent helicase/nuclease DNA2 [Cucumis melo var. makuwa]1.8e-2135.92Show/hide
Query:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND-----------------------------------------------SC
        FNLVQLFLQGEQN HLRKLIVDL APRFD GCIF QDPAISYIWSE NLND                                               S 
Subjt:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND-----------------------------------------------SC

Query:  CEGSVDG-------------------------RCNCFN-----NFLSFKFSLDRDALLFVT-------------------------------GKMFFDRV
           +VD                          R +CF+     +    +  LD+  ++ VT                               G + F   
Subjt:  CEGSVDG-------------------------RCNCFN-----NFLSFKFSLDRDALLFVT-------------------------------GKMFFDRV

Query:  EHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS
               +Q   L +STEARENG GISLFCRLSEAHP+AISALQS
Subjt:  EHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS

XP_011650825.1 DNA replication ATP-dependent helicase/nuclease JHS1 [Cucumis sativus]4.8e-2236.33Show/hide
Query:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND-----------------------------------------------SC
        FNLVQLFLQGEQN HLRKLIVDL APRFD GCIF QDPAISYIWSE NLND                                               S 
Subjt:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND-----------------------------------------------SC

Query:  CEGSVDG-------------------------RCNCFN-----NFLSFKFSLDRDALLFVT-------------------------------GKMFFDRV
           +VD                          R +CF+     +    K  LD+  ++ VT                               G + F   
Subjt:  CEGSVDG-------------------------RCNCFN-----NFLSFKFSLDRDALLFVT-------------------------------GKMFFDRV

Query:  EHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS
               +Q   L +STEARENG GISLFCRLSEAHP+AISALQS
Subjt:  EHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS

XP_038878324.1 DNA replication ATP-dependent helicase/nuclease JHS1 [Benincasa hispida]3.7e-2236.33Show/hide
Query:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND-----------------------------------------------SC
        FNLVQLFLQGEQN HLRKLIVDL APRFD GCIF QDPAISYIWSE NLND                                               S 
Subjt:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND-----------------------------------------------SC

Query:  CEGSVDG-------------------------RCNCFN-----NFLSFKFSLDRDALLFVT-------------------------------GKMFFDRV
           +VD                          R +CF+     +    K  LD+  ++ VT                               G + F   
Subjt:  CEGSVDG-------------------------RCNCFN-----NFLSFKFSLDRDALLFVT-------------------------------GKMFFDRV

Query:  EHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS
               +Q   L +STEARENG GISLFCRLSEAHP+AISALQS
Subjt:  EHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS

TrEMBL top hitse value%identityAlignment
A0A0A0L7S1 Uncharacterized protein2.3e-2236.33Show/hide
Query:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND-----------------------------------------------SC
        FNLVQLFLQGEQN HLRKLIVDL APRFD GCIF QDPAISYIWSE NLND                                               S 
Subjt:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND-----------------------------------------------SC

Query:  CEGSVDG-------------------------RCNCFN-----NFLSFKFSLDRDALLFVT-------------------------------GKMFFDRV
           +VD                          R +CF+     +    K  LD+  ++ VT                               G + F   
Subjt:  CEGSVDG-------------------------RCNCFN-----NFLSFKFSLDRDALLFVT-------------------------------GKMFFDRV

Query:  EHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS
               +Q   L +STEARENG GISLFCRLSEAHP+AISALQS
Subjt:  EHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS

A0A1S3AVX8 DNA replication ATP-dependent helicase/nuclease DNA28.9e-2235.92Show/hide
Query:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND-----------------------------------------------SC
        FNLVQLFLQGEQN HLRKLIVDL APRFD GCIF QDPAISYIWSE NLND                                               S 
Subjt:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND-----------------------------------------------SC

Query:  CEGSVDG-------------------------RCNCFN-----NFLSFKFSLDRDALLFVT-------------------------------GKMFFDRV
           +VD                          R +CF+     +    +  LD+  ++ VT                               G + F   
Subjt:  CEGSVDG-------------------------RCNCFN-----NFLSFKFSLDRDALLFVT-------------------------------GKMFFDRV

Query:  EHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS
               +Q   L +STEARENG GISLFCRLSEAHP+AISALQS
Subjt:  EHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS

A0A218Y2K3 Uncharacterized protein1.0e-2242.69Show/hide
Query:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLNDSCCEG--------------SVDGRCNCFNNFLSFKFSLDRDALLFVTG-
        FNL+QLFL+   + HLR++IVDL APRFD GCIF QDPAISY+WSE NLND                    + G         + K  L R A + +T  
Subjt:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLNDSCCEG--------------SVDGRCNCFNNFLSFKFSLDRDALLFVTG-

Query:  ------KMFFDRVEHTKCG-------------RHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS
               +     +    G              +Q   L KS EA+ENG GISLFCRLSEAHP+AISALQS
Subjt:  ------KMFFDRVEHTKCG-------------RHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS

A0A5D3D0W4 DNA replication ATP-dependent helicase/nuclease DNA28.9e-2235.92Show/hide
Query:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND-----------------------------------------------SC
        FNLVQLFLQGEQN HLRKLIVDL APRFD GCIF QDPAISYIWSE NLND                                               S 
Subjt:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND-----------------------------------------------SC

Query:  CEGSVDG-------------------------RCNCFN-----NFLSFKFSLDRDALLFVT-------------------------------GKMFFDRV
           +VD                          R +CF+     +    +  LD+  ++ VT                               G + F   
Subjt:  CEGSVDG-------------------------RCNCFN-----NFLSFKFSLDRDALLFVT-------------------------------GKMFFDRV

Query:  EHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS
               +Q   L +STEARENG GISLFCRLSEAHP+AISALQS
Subjt:  EHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS

A0A6J1ISY1 DNA replication ATP-dependent helicase/nuclease DNA2 isoform X12.6e-2135.51Show/hide
Query:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND-----------------------------------------------SC
        FNLVQL LQGEQN HLRKLIVDL APRFD GCIF QDPAISYIWSE NLND                                               S 
Subjt:  FNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND-----------------------------------------------SC

Query:  CEGSVDG-------------------------RCNCFN-----NFLSFKFSLDRDALLFVT-------------------------------GKMFFDRV
           +VD                          R +CF+     +    +  LD+  ++ VT                               G + F   
Subjt:  CEGSVDG-------------------------RCNCFN-----NFLSFKFSLDRDALLFVT-------------------------------GKMFFDRV

Query:  EHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS
               +Q   L +STEARENG GISLFCRLSEAHP+AISALQS
Subjt:  EHTKCGRHQNMRLAKSTEARENGPGISLFCRLSEAHPEAISALQS

SwissProt top hitse value%identityAlignment
A0A1P8ASY1 DNA replication ATP-dependent helicase/nuclease JHS12.3e-1167.31Show/hide
Query:  FNLVQLFLQGEQNGH-LRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND
        FNL+QLF+   QNGH +RK+IVDL  PRFD G I  QDPAISYIWSE +LN+
Subjt:  FNLVQLFLQGEQNGH-LRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND

A0A1P8ASY1 DNA replication ATP-dependent helicase/nuclease JHS13.9e-0678.79Show/hide
Query:  LAKSTEARENGPGISLFCRLSEAHPEAISALQS
        L +STEARENG GISLF RLSEAHP+AIS LQ+
Subjt:  LAKSTEARENGPGISLFCRLSEAHPEAISALQS

Arabidopsis top hitse value%identityAlignment
AT1G08840.1 DNA replication helicase, putative1.7e-1267.31Show/hide
Query:  FNLVQLFLQGEQNGH-LRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND
        FNL+QLF+   QNGH +RK+IVDL  PRFD G I  QDPAISYIWSE +LN+
Subjt:  FNLVQLFLQGEQNGH-LRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND

AT1G08840.1 DNA replication helicase, putative2.7e-0778.79Show/hide
Query:  LAKSTEARENGPGISLFCRLSEAHPEAISALQS
        L +STEARENG GISLF RLSEAHP+AIS LQ+
Subjt:  LAKSTEARENGPGISLFCRLSEAHPEAISALQS

AT1G08840.2 DNA replication helicase, putative1.7e-1267.31Show/hide
Query:  FNLVQLFLQGEQNGH-LRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND
        FNL+QLF+   QNGH +RK+IVDL  PRFD G I  QDPAISYIWSE +LN+
Subjt:  FNLVQLFLQGEQNGH-LRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLND

AT1G08840.2 DNA replication helicase, putative2.7e-0778.79Show/hide
Query:  LAKSTEARENGPGISLFCRLSEAHPEAISALQS
        L +STEARENG GISLF RLSEAHP+AIS LQ+
Subjt:  LAKSTEARENGPGISLFCRLSEAHPEAISALQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTTTACCAAACAAGGAGCCGTTTAATCTTGTACAACTGTTTCTGCAAGGTGAACAAAACGGCCATCTTAGAAAGTTGATCGTAGATCTTGTGGCTCCAAGATTTGACTG
TGGATGCATATTTGGCCAGGATCCAGCAATATCTTACATTTGGTCAGAAACGAATTTAAATGATTCATGCTGTGAAGGCAGTGTTGATGGGAGGTGTAACTGTTTCAACA
ATTTTCTATCTTTCAAGTTTTCTTTGGATCGGGATGCTCTTCTTTTCGTAACTGGTAAAATGTTCTTTGACAGAGTTGAACATACAAAGTGTGGAAGACATCAGAATATG
AGATTGGCCAAGAGTACCGAGGCTCGAGAAAATGGACCGGGGATAAGCTTGTTTTGTAGGCTTTCAGAAGCACATCCTGAAGCAATTTCCGCATTACAAAGCTAG
mRNA sequenceShow/hide mRNA sequence
TCTTTACCAAACAAGGAGCCGTTTAATCTTGTACAACTGTTTCTGCAAGGTGAACAAAACGGCCATCTTAGAAAGTTGATCGTAGATCTTGTGGCTCCAAGATTTGACTG
TGGATGCATATTTGGCCAGGATCCAGCAATATCTTACATTTGGTCAGAAACGAATTTAAATGATTCATGCTGTGAAGGCAGTGTTGATGGGAGGTGTAACTGTTTCAACA
ATTTTCTATCTTTCAAGTTTTCTTTGGATCGGGATGCTCTTCTTTTCGTAACTGGTAAAATGTTCTTTGACAGAGTTGAACATACAAAGTGTGGAAGACATCAGAATATG
AGATTGGCCAAGAGTACCGAGGCTCGAGAAAATGGACCGGGGATAAGCTTGTTTTGTAGGCTTTCAGAAGCACATCCTGAAGCAATTTCCGCATTACAAAGCTAG
Protein sequenceShow/hide protein sequence
SLPNKEPFNLVQLFLQGEQNGHLRKLIVDLVAPRFDCGCIFGQDPAISYIWSETNLNDSCCEGSVDGRCNCFNNFLSFKFSLDRDALLFVTGKMFFDRVEHTKCGRHQNM
RLAKSTEARENGPGISLFCRLSEAHPEAISALQS