CuGenDBv2

Gene ID	Spg032011
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC103483850
Genome location	scaffold11:37888591..37888950
RNA-Seq Expression	Spg032011
Synteny	Spg032011
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134216.1 uncharacterized protein LOC101205160 [Cucumis sativus]

2.6e-53

95.8

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH +LLAVVVAIVIVVPFLLGDQGEALT+AISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

XP_022137815.1 uncharacterized protein LOC111009160 [Momordica charantia]

5.7e-53

93.28

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHG+LLAVVVA+VIVVPF+ GDQGEA+TEAISDLLSPFGLLLLP++LLL IQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

XP_023528270.1 uncharacterized protein LOC111791239 [Cucurbita pepo subsp. pepo]

2.4e-51

93.28

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHGV+LAVVVA VI+VPF LGD GEA+TEAISDLLSPFGLLLLPILLLLTIQFLSSDRGS VSAIFST EPDSIHRVTGSPVGVALFLLLI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

XP_028786850.1 uncharacterized protein LOC114742804 [Prosopis alba]

1.1e-51

89.08

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHG+LLA+VVAIV++VPFLLGDQGEA+TEAIS+LLSP GLLLLPI+LLLTIQFLSSDRGSF+S++FSTGEPDSIHRV+GSPVGVALFLLLI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNR+SIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

XP_038899735.1 uncharacterized protein LOC120086972 [Benincasa hispida]

5.7e-53

95.8

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH +LLAVVVAIVIVVPFLLGDQGEALTEAISDLLSP GLLLLPILLLLTIQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5U0 Uncharacterized protein

1.2e-53

95.8

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH +LLAVVVAIVIVVPFLLGDQGEALT+AISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

A0A1S3AY58 LOW QUALITY PROTEIN: uncharacterized protein LOC103483850

1.2e-53

95.8

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH +LLAVVVAIVIVVPFLLGDQGEALT+AISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

A0A5A7U157 Uncharacterized protein

1.2e-53

95.8

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPH +LLAVVVAIVIVVPFLLGDQGEALT+AISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

A0A6J1C7Q9 uncharacterized protein LOC111009160

2.8e-53

93.28

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHG+LLAVVVA+VIVVPF+ GDQGEA+TEAISDLLSPFGLLLLP++LLL IQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

A0A6J1I8A7 uncharacterized protein LOC111472294

2.6e-51

95.8

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI
        MIEERQGGAPHGVLLAVVVAIVIV PFLLGD GEALTEAISDLLSPFGLLLLPILLLL IQFLSSDRGSFVSAIFS+GEPDSIHRVTGSPVGVALFL+LI
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLI

Query:  LFLLYNRISIFGGDDDSGD
        LFLLYNRISIFGGDDDSGD
Subjt:  LFLLYNRISIFGGDDDSGD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G31940.1 unknown protein

1.8e-04

29.63

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Query:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLL--PILLLLTIQFLSSDR--GSFVSAIFSTGEPDSIHRVTGSPVGVALF
        M  +++G  P  V L + V ++I++ F+      +    I      F L L+  P+LLLL + FLS D+  G  ++++    E +S++R  G+P GVA  
Subjt:  MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLL--PILLLLTIQFLSSDR--GSFVSAIFSTGEPDSIHRVTGSPVGVALF

Query:  LLLILFLL
        L+ + F++
Subjt:  LLLILFLL

AT3G06890.1 unknown protein

1.6e-45

79.65

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Query:  GGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLILFLLYN
        G APHG++LAVVVA+V++VPF +GD GEA+T+AI++LLSP GLLLLPI+LLLTIQFLSS+RGSFVSAIFSTGEP+SIHRV+GSPVGVALFL+LILFLLY 
Subjt:  GGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLILFLLYN

Query:  RISIFGGDDDSGD
        R SIFGGDD S D
Subjt:  RISIFGGDDDSGD

Sequences

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CDS sequence

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ATGATAGAAGAACGCCAAGGCGGAGCTCCCCACGGCGTTCTACTGGCGGTCGTCGTCGCCATCGTCATCGTCGTCCCCTTCCTCCTCGGCGACCAAGGCGAGGCCCTCAC
CGAAGCCATCTCCGACCTCCTCAGCCCCTTCGGCCTCCTCCTCCTCCCCATCCTCCTCCTCCTCACCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCA
TCTTCTCCACCGGCGAGCCCGATTCCATCCACCGCGTCACCGGATCCCCCGTCGGCGTCGCTCTCTTCCTTCTCCTCATTCTCTTCCTACTCTACAATCGGATTTCCATC
TTCGGCGGCGACGATGATTCCGGCGACTGA

mRNA sequence

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Protein sequence

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MIEERQGGAPHGVLLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSTGEPDSIHRVTGSPVGVALFLLLILFLLYNRISI
FGGDDDSGD

Spg032011 (gene) of Sponge gourd (cylindrica) v1 genome