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Spg032029 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032029
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold11:37767934..37769982
RNA-Seq ExpressionSpg032029
SyntenySpg032029
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4262994.1 unnamed protein product [Prunus armeniaca]6.2e-2044.86Show/hide
Query:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLI
        RY P++ F EA   ++ SFIWRSL WGK L   G+RWR G+G++  +YT+ WLP  S F++ S  QLPL + V +LF++S  W+   ++ +F   E   I
Subjt:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLI

Query:  LGIPLVN
        L IPLV+
Subjt:  LGIPLVN

XP_008237273.1 PREDICTED: uncharacterized protein LOC103336015 [Prunus mume]8.1e-2046.09Show/hide
Query:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLI
        RYFPNS F  A + S  SF W+SL+WG++L + G+RWR GDG+  +IY   W+P +  F +QS   LP  S V +LF+AS  WD  K+   F   EA  I
Subjt:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLI

Query:  LGIPLVNSHRADRQI
        L IPL+  +  DR+I
Subjt:  LGIPLVNSHRADRQI

XP_022149385.1 uncharacterized protein LOC111017816 [Momordica charantia]1.9e-2148.7Show/hide
Query:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLI
        RYF N  F +A   S+ S+IWRSL+ G+++ Q+G+RWR GDG    IY SNW+PR+ +  V S  +LPL S VS L SAS  W+E  IR  F+  EASLI
Subjt:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLI

Query:  LGIPLVNSHRADRQI
        L IP+     +D +I
Subjt:  LGIPLVNSHRADRQI

XP_024948107.1 uncharacterized protein LOC112495648 [Citrus sinensis]1.2e-2046.09Show/hide
Query:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLI
        RYF +S F +A+  S+ SFIWRS++WG+ +   G+RWR GDG++A IY S W+PR S+F+  S   LPLDS VSEL  A+  W E  I+Q F  + A  I
Subjt:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLI

Query:  LGIPLVNSHRADRQI
        L IP   +   D  +
Subjt:  LGIPLVNSHRADRQI

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]9.5e-2144.03Show/hide
Query:  IVDKFLYRRLRYNNELEEAFGRSRRGEQRRYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDS
        +V K  +R L+Y N L        R  Q RYF NS F  A+A ++AS+IWRS+MWG+ + + GMRWR G+G+   I++ NWLPR  +FR      LP+ S
Subjt:  IVDKFLYRRLRYNNELEEAFGRSRRGEQRRYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDS

Query:  YVSELFSASRAWDETKIRQLFEPDEASLILGIPL
         V++L  A   WDE K+RQ F   + + IL IPL
Subjt:  YVSELFSASRAWDETKIRQLFEPDEASLILGIPL

TrEMBL top hitse value%identityAlignment
A0A6J1D5K1 uncharacterized protein LOC1110178169.3e-2248.7Show/hide
Query:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLI
        RYF N  F +A   S+ S+IWRSL+ G+++ Q+G+RWR GDG    IY SNW+PR+ +  V S  +LPL S VS L SAS  W+E  IR  F+  EASLI
Subjt:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLI

Query:  LGIPLVNSHRADRQI
        L IP+     +D +I
Subjt:  LGIPLVNSHRADRQI

A0A6J5TGK7 CCHC-type domain-containing protein3.0e-2044.86Show/hide
Query:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLI
        RY P++ F EA   ++ SFIWRSL WGK L   G+RWR G+G++  +YT+ WLP  S F++ S  QLPL + V +LF++S  W+   ++ +F   E   I
Subjt:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLI

Query:  LGIPLVN
        L IPLV+
Subjt:  LGIPLVN

A0A6J5TIF9 Reverse transcriptase domain-containing protein1.5e-1945.22Show/hide
Query:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLI
        RYFP+S F  A + S  SF W+SL+WG++L + G+RWR GDG+  +IY   W+P +  F +QS   LP+ S V +LF+AS  WD  K+   F   EA  I
Subjt:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLI

Query:  LGIPLVNSHRADRQI
        L IPL+     DR+I
Subjt:  LGIPLVNSHRADRQI

A0A803PM68 Uncharacterized protein1.6e-2141.35Show/hide
Query:  IVDKFLYRRLRYNNELEEAFGRSRRGEQRRYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDS
        ++ K ++R +RY N L        +  +  YFPN G  EA++ +HASF+WRSL+WGK + Q G RWR G+G +  +    WLPR  +F+V     LP   
Subjt:  IVDKFLYRRLRYNNELEEAFGRSRRGEQRRYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDS

Query:  YVSELFSASRAWDETKIRQLFEPDEASLILGIP
        YV +L   +  WDE  IR  F P +A LILG+P
Subjt:  YVSELFSASRAWDETKIRQLFEPDEASLILGIP

A0A803QQT2 Uncharacterized protein6.7e-2046.6Show/hide
Query:  YFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLIL
        YFP  G  EA   ++ASF+WRSL+WGK L   G RWR G+G++  +    WLPR  +F+V     LP + YV++L  A   WDE  IR +F P +  LIL
Subjt:  YFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVSELFSASRAWDETKIRQLFEPDEASLIL

Query:  GIP
        GIP
Subjt:  GIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.7e-0431.58Show/hide
Query:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRES
        RYFP+S   E    +  S+ WRS++ G+ L   G+    GDG    ++   W+  E+
Subjt:  RYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGACCTTGAAACCACAATAGTAGACAAATTCTTGTATCGAAGGCTAAGATACAACAATGAATTGGAGGAGGCGTTTGGGAGATCGAGACGAGGAGAACAAAGGAG
GTATTTCCCAAATAGTGGATTCACTGAGGCCCAGGCTAGCTCACACGCATCCTTTATATGGCGCAGCTTGATGTGGGGGAAAAACCTCCATCAAACGGGTATGCGTTGGA
GGACTGGAGATGGCCAGGCAGCTCACATCTATACCTCAAACTGGCTACCCCGAGAGTCCTCCTTCAGAGTCCAATCCACGACACAGCTACCTTTAGACAGCTATGTTAGT
GAGTTATTCTCAGCGTCGAGGGCGTGGGATGAAACCAAAATTCGGCAACTCTTTGAGCCTGATGAAGCTAGTCTAATTCTTGGCATCCCATTAGTTAATTCCCACCGGGC
AGATCGGCAGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGACCTTGAAACCACAATAGTAGACAAATTCTTGTATCGAAGGCTAAGATACAACAATGAATTGGAGGAGGCGTTTGGGAGATCGAGACGAGGAGAACAAAGGAG
GTATTTCCCAAATAGTGGATTCACTGAGGCCCAGGCTAGCTCACACGCATCCTTTATATGGCGCAGCTTGATGTGGGGGAAAAACCTCCATCAAACGGGTATGCGTTGGA
GGACTGGAGATGGCCAGGCAGCTCACATCTATACCTCAAACTGGCTACCCCGAGAGTCCTCCTTCAGAGTCCAATCCACGACACAGCTACCTTTAGACAGCTATGTTAGT
GAGTTATTCTCAGCGTCGAGGGCGTGGGATGAAACCAAAATTCGGCAACTCTTTGAGCCTGATGAAGCTAGTCTAATTCTTGGCATCCCATTAGTTAATTCCCACCGGGC
AGATCGGCAGATATGA
Protein sequenceShow/hide protein sequence
MVDLETTIVDKFLYRRLRYNNELEEAFGRSRRGEQRRYFPNSGFTEAQASSHASFIWRSLMWGKNLHQTGMRWRTGDGQAAHIYTSNWLPRESSFRVQSTTQLPLDSYVS
ELFSASRAWDETKIRQLFEPDEASLILGIPLVNSHRADRQI