CuGenDBv2

Gene ID	Spg032030
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	BHLH domain-containing protein
Genome location	scaffold11:38374903..38375826
RNA-Seq Expression	Spg032030
Synteny	Spg032030
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain IPR036638 - Helix-loop-helix DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6582238.1 Transcription factor basic helix-loop-helix 95, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-80

88.44

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Query:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME
        MEA TDSV+ L P ILPVH+SE A+ KASTSRKRRR ALEANGGVQ+KGREKRKEMSESFDVLQSLVPNLSPKATRE IV+ETIQFIE LQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME

Query:  KKPSESVTMLPNTNSDS-SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSLKK
        KKP ESVTMLP+TNSDS  GGVIVSVS NIVLFGII ASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG VE TIEQIRNDILSLKK
Subjt:  KKPSESVTMLPNTNSDS-SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSLKK

XP_022955986.1 uncharacterized protein LOC111457820 [Cucurbita moschata]

1.8e-80

88.44

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Query:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME
        MEA TDSV+ L P ILPVH+SE A+ KASTSRKRRR ALEANGGVQ+KGREKRKEMSESFDVLQSLVPNLSPKATRE IV+ETIQFIE LQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME

Query:  KKPSESVTMLPNTNSDS-SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSLKK
        KKP ESVTMLP+TNSDS  GGVIVSVS NIVLFGII ASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG VE TIEQIRNDILSLKK
Subjt:  KKPSESVTMLPNTNSDS-SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSLKK

XP_022979931.1 uncharacterized protein LOC111479473 [Cucurbita maxima]

8.5e-78

84.8

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Query:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME
        MEA TDSV+ L P ILPVH+SE A+ KASTSRKR R ALEANGG Q+KGREKRKEMSESFDVLQSLVPNLSPKATRE IV+ETIQFIE LQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME

Query:  KKPSESVTMLPNTNSDS------SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDIL
        KKP ESVTMLP+TNSDS       GGVIVSVS NIVLFGII ASVRRGMVT+ILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG VE TIEQIRNDIL
Subjt:  KKPSESVTMLPNTNSDS------SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDIL

Query:  SLKK
        SLKK
Subjt:  SLKK

XP_023528352.1 uncharacterized protein LOC111791298 [Cucurbita pepo subsp. pepo]

1.1e-80

87.13

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Query:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME
        MEA TDSV+ L P ILPVH+SE A+ KASTSRKRRR ALEANGGVQ+KGREKRKEMSESFDVLQSLVPNLSPKATRE IV+ETIQFIE LQKQLTRLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME

Query:  KKPSESVTMLPNTNSDS----SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL
        KKP ESVTMLP+TNSDS     GGVIVSVS NIVLFGII ASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTAS+HG VE TIEQIRNDILSL
Subjt:  KKPSESVTMLPNTNSDS----SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL

Query:  KK
        KK
Subjt:  KK

XP_038885840.1 transcription factor bHLH95-like [Benincasa hispida]

7.0e-80

87.13

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Query:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME
        MEA TDSV+PLFP ILPVH+SE  +KKAS SRKR R ALEANGGVQKK REKRKEMSESFDVLQSLVPNLSPKATRE IV+ETIQFIEFLQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME

Query:  KKPSESVTMLPNTNSDSS----GGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL
        KK SESVTMLP+TNSDSS    GGVIVSVSGNIVLFGIIIASV+RGMVTQILM FERHQAEVLAANVAVSHGNLTLTVTASVHG VE TIE I+NDILSL
Subjt:  KKPSESVTMLPNTNSDSS----GGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL

Query:  KK
        KK
Subjt:  KK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5R7 BHLH domain-containing protein

1.6e-74

80.79

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Query:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME
        MEA +DSVIPLFP ILPVH  E  +K+AS SRKR R ALEANGGVQKK +EKRKEMSESFDVL+SLVPNLSPKATRE IV+  IQFIEFLQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME

Query:  KKPSESVTMLPNTNSDSSG-----GVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILS
        KK SESV +LPNTNSDSSG     GVIVS+SGNIVLFG+IIASV+RG+VTQIL+ FERH+AEVLAANV VSHGNLTLTVTASVHG VE TIEQIRNDIL 
Subjt:  KKPSESVTMLPNTNSDSSG-----GVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILS

Query:  LKK
        LKK
Subjt:  LKK

A0A1S4DSM0 transcription factor bHLH95-like

5.6e-75

80.69

Show/hide

Query:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME
        MEA +DSV+PLFP ILP+H  E  +K+AS SRKR R ALEANGGVQKK +EKRKEMSESFDVL+SLVPNLSPKATRE IV+  IQFIEFLQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME

Query:  KKPSESVTMLPNTNSDSSG----GVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL
        KK SESVT+LPN+NSDSSG    GVIVS+SGNIVLFG+IIASV+RGMVTQIL+ FERH+ EVLAANV VSHGNLTLTVTASVHG VE TIEQIRNDILSL
Subjt:  KKPSESVTMLPNTNSDSSG----GVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL

Query:  KK
        KK
Subjt:  KK

A0A5A7U767 Transcription factor bHLH95-like

5.6e-75

80.69

Show/hide

Query:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME
        MEA +DSV+PLFP ILP+H  E  +K+AS SRKR R ALEANGGVQKK +EKRKEMSESFDVL+SLVPNLSPKATRE IV+  IQFIEFLQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME

Query:  KKPSESVTMLPNTNSDSSG----GVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL
        KK SESVT+LPN+NSDSSG    GVIVS+SGNIVLFG+IIASV+RGMVTQIL+ FERH+ EVLAANV VSHGNLTLTVTASVHG VE TIEQIRNDILSL
Subjt:  KKPSESVTMLPNTNSDSSG----GVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSL

Query:  KK
        KK
Subjt:  KK

A0A6J1GWN9 uncharacterized protein LOC111457820

8.9e-81

88.44

Show/hide

Query:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME
        MEA TDSV+ L P ILPVH+SE A+ KASTSRKRRR ALEANGGVQ+KGREKRKEMSESFDVLQSLVPNLSPKATRE IV+ETIQFIE LQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME

Query:  KKPSESVTMLPNTNSDS-SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSLKK
        KKP ESVTMLP+TNSDS  GGVIVSVS NIVLFGII ASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG VE TIEQIRNDILSLKK
Subjt:  KKPSESVTMLPNTNSDS-SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSLKK

A0A6J1IS55 uncharacterized protein LOC111479473

4.1e-78

84.8

Show/hide

Query:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME
        MEA TDSV+ L P ILPVH+SE A+ KASTSRKR R ALEANGG Q+KGREKRKEMSESFDVLQSLVPNLSPKATRE IV+ETIQFIE LQKQL RLEME
Subjt:  MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEME

Query:  KKPSESVTMLPNTNSDS------SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDIL
        KKP ESVTMLP+TNSDS       GGVIVSVS NIVLFGII ASVRRGMVT+ILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG VE TIEQIRNDIL
Subjt:  KKPSESVTMLPNTNSDS------SGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDIL

Query:  SLKK
        SLKK
Subjt:  SLKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

2.3e-04

30.93

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Query:  LPVHESEVADKKASTSRKRRRSALEANGGVQKK-----------GREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEMEK
        LP H S  + +  +T+ K+ +   + N    ++            RE+RK+M + F  L +L+P L PKA +  IV E +  I+ L++ L +LEM+K
Subjt:  LPVHESEVADKKASTSRKRRRSALEANGGVQKK-----------GREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEMEK

Sequences

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CDS sequence

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ATGGAGGCCGGCACCGACTCTGTGATTCCACTTTTCCCGCAGATATTGCCGGTGCATGAATCTGAAGTTGCCGACAAGAAGGCTTCGACCTCAAGAAAGCGTCGCAGATC
AGCTCTGGAAGCCAACGGCGGTGTACAGAAGAAGGGGAGGGAGAAGAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCAATCTCTCGTACCGAATCTCTCTCCCAAGG
CTACGAGGGAGAATATTGTCACCGAAACGATCCAGTTCATCGAGTTTCTGCAGAAGCAGTTGACGAGGCTGGAAATGGAGAAGAAACCATCGGAATCGGTGACGATGCTT
CCGAATACGAACTCCGATTCATCAGGCGGCGTGATCGTCTCGGTCTCCGGCAACATCGTGTTGTTTGGGATTATTATTGCTTCTGTTCGACGAGGTATGGTGACACAGAT
TTTAATGGCGTTTGAAAGACACCAGGCTGAAGTTCTAGCAGCGAATGTTGCAGTCAGCCATGGCAATTTAACATTAACAGTCACAGCTTCTGTACACGGTTCCGTAGAGA
AAACCATAGAGCAGATTAGAAACGATATCCTAAGCTTAAAGAAGTAA

mRNA sequence

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Protein sequence

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MEAGTDSVIPLFPQILPVHESEVADKKASTSRKRRRSALEANGGVQKKGREKRKEMSESFDVLQSLVPNLSPKATRENIVTETIQFIEFLQKQLTRLEMEKKPSESVTML
PNTNSDSSGGVIVSVSGNIVLFGIIIASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGSVEKTIEQIRNDILSLKK

Spg032030 (gene) of Sponge gourd (cylindrica) v1 genome