; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032040 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032040
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionExpansin
Genome locationscaffold11:37545914..37556468
RNA-Seq ExpressionSpg032040
SyntenySpg032040
Gene Ontology termsGO:0009664 - plant-type cell wall organization (biological process)
InterPro domainsIPR002963 - Expansin
IPR007112 - Expansin/pollen allergen, DPBB domain
IPR023393 - START-like domain superfamily
IPR036908 - RlpA-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578573.1 Expansin-A5, partial [Cucurbita argyrosperma subsp. sororia]6.0e-2357.14Show/hide
Query:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPIFR
        GW NAHATFYGGSDASGT+G   G+ NL S                       CFELRCVND + CIP   VVTATNFCP  GWCDPPNHHFDL QPIF+
Subjt:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPIFR

Query:  QKYSY
            Y
Subjt:  QKYSY

KYP36499.1 Expansin-A5 [Cajanus cajan]3.5e-2353.27Show/hide
Query:  NQGWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPI
        N GWTNAHATFYGGSDASGT+G   G+ NL S                      +C++++C ND + C+PA  VVTATNFCP  GWCDPPNHHFDL QP+
Subjt:  NQGWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPI

Query:  FRQKYSY
        F+Q   Y
Subjt:  FRQKYSY

XP_020205520.1 expansin-A10 [Cajanus cajan]3.5e-2353.27Show/hide
Query:  NQGWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPI
        N GWTNAHATFYGGSDASGT+G   G+ NL S                      +C++++C ND + C+PA  VVTATNFCP  GWCDPPNHHFDL QP+
Subjt:  NQGWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPI

Query:  FRQKYSY
        F+Q   Y
Subjt:  FRQKYSY

XP_022938749.1 expansin-A10-like [Cucurbita moschata]6.0e-2357.14Show/hide
Query:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPIFR
        GW NAHATFYGGSDASGT+G   G+ NL S                       CFELRCVND + CIP   VVTATNFCP  GWCDPPNHHFDL QPIF+
Subjt:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPIFR

Query:  QKYSY
            Y
Subjt:  QKYSY

XP_022993663.1 expansin-A10-like [Cucurbita maxima]6.0e-2357.14Show/hide
Query:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPIFR
        GW NAHATFYGGSDASGT+G   G+ NL S                       CFELRCVND + CIP   VVTATNFCP  GWCDPPNHHFDL QPIF+
Subjt:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPIFR

Query:  QKYSY
            Y
Subjt:  QKYSY

TrEMBL top hitse value%identityAlignment
A0A151R1W3 Expansin1.7e-2353.27Show/hide
Query:  NQGWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPI
        N GWTNAHATFYGGSDASGT+G   G+ NL S                      +C++++C ND + C+PA  VVTATNFCP  GWCDPPNHHFDL QP+
Subjt:  NQGWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPI

Query:  FRQKYSY
        F+Q   Y
Subjt:  FRQKYSY

A0A218VWY0 Expansin2.9e-2353.1Show/hide
Query:  IDQINFNQGWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHF
        +D   F  GWTNAHATFYGGSDASGT+G   G+ NL S                       CFELRCV D + C+P   VVTATNFCP  GWCDPP HHF
Subjt:  IDQINFNQGWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHF

Query:  DLLQPIFRQKYSY
        DL QPIF+    Y
Subjt:  DLLQPIFRQKYSY

A0A5C7HMH3 Expansin4.9e-2356.19Show/hide
Query:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPIFR
        GW NAHATFYGG DASGT+G   G+ NL S                       CFELRCVND K C+P   VVTATNFCP  GWCDPPNHHFDL QPIF+
Subjt:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPIFR

Query:  QKYSY
            Y
Subjt:  QKYSY

A0A6J1FF05 Expansin2.9e-2357.14Show/hide
Query:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPIFR
        GW NAHATFYGGSDASGT+G   G+ NL S                       CFELRCVND + CIP   VVTATNFCP  GWCDPPNHHFDL QPIF+
Subjt:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPIFR

Query:  QKYSY
            Y
Subjt:  QKYSY

A0A6J1K2Y6 Expansin2.9e-2357.14Show/hide
Query:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPIFR
        GW NAHATFYGGSDASGT+G   G+ NL S                       CFELRCVND + CIP   VVTATNFCP  GWCDPPNHHFDL QPIF+
Subjt:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPIFR

Query:  QKYSY
            Y
Subjt:  QKYSY

SwissProt top hitse value%identityAlignment
O80622 Expansin-A152.2e-2043.97Show/hide
Query:  FNQGWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPN
        ++ GW NAHATFYGGSDASGT+G   G+ NL S                       CFE++C +D   C+P   +VTATNFCP          GWC+PP 
Subjt:  FNQGWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPN

Query:  HHFDLLQPIFRQKYSY
        HHFDL QP+F++   Y
Subjt:  HHFDLLQPIFRQKYSY

Q38864 Expansin-A51.4e-1952.48Show/hide
Query:  WTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPA-PFVVTATNFCPLDGWCDPPNHHFDLLQPIFR
        W NAHATFYGG DASGT+G   G+ NL S                       CFEL CVND + CI     VVTATNFCP  G CDPPNHHFDL QPI+ 
Subjt:  WTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPA-PFVVTATNFCPLDGWCDPPNHHFDLLQPIFR

Query:  Q
        +
Subjt:  Q

Q9C554 Expansin-A19.9e-2146.9Show/hide
Query:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPNHHF
        GW NAHATFYGG DASGT+G   G+ NL S                       CFE+RC ND K C+P   VVTATNFCP          GWC+PP  HF
Subjt:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPNHHF

Query:  DLLQPIFRQKYSY
        DL QP+F++   Y
Subjt:  DLLQPIFRQKYSY

Q9FMA0 Expansin-A149.3e-1943.1Show/hide
Query:  FNQGWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPN
        ++ GW NA ATFYGG+DASGT+G   G+ NL S                       CF+++CV+D K CI     VT TNFCP          GWC+PP 
Subjt:  FNQGWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPN

Query:  HHFDLLQPIFRQKYSY
        HHFDL QPIF +   Y
Subjt:  HHFDLLQPIFRQKYSY

Q9LDR9 Expansin-A101.3e-2045.69Show/hide
Query:  FNQGWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLD--------GWCDPPN
        +  GW NAHATFYGG DASGT+G   G+ NL S                      +CFE+RC ND K C+P   VVTATNFCP +        GWC+PP 
Subjt:  FNQGWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCPLD--------GWCDPPN

Query:  HHFDLLQPIFRQKYSY
         HFDL QP+F++   Y
Subjt:  HHFDLLQPIFRQKYSY

Arabidopsis top hitse value%identityAlignment
AT1G69530.1 expansin A17.0e-2246.9Show/hide
Query:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPNHHF
        GW NAHATFYGG DASGT+G   G+ NL S                       CFE+RC ND K C+P   VVTATNFCP          GWC+PP  HF
Subjt:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPNHHF

Query:  DLLQPIFRQKYSY
        DL QP+F++   Y
Subjt:  DLLQPIFRQKYSY

AT1G69530.2 expansin A17.0e-2246.9Show/hide
Query:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPNHHF
        GW NAHATFYGG DASGT+G   G+ NL S                       CFE+RC ND K C+P   VVTATNFCP          GWC+PP  HF
Subjt:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPNHHF

Query:  DLLQPIFRQKYSY
        DL QP+F++   Y
Subjt:  DLLQPIFRQKYSY

AT1G69530.3 expansin A17.0e-2246.9Show/hide
Query:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPNHHF
        GW NAHATFYGG DASGT+G   G+ NL S                       CFE+RC ND K C+P   VVTATNFCP          GWC+PP  HF
Subjt:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPNHHF

Query:  DLLQPIFRQKYSY
        DL QP+F++   Y
Subjt:  DLLQPIFRQKYSY

AT1G69530.4 expansin A17.0e-2246.9Show/hide
Query:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPNHHF
        GW NAHATFYGG DASGT+G   G+ NL S                       CFE+RC ND K C+P   VVTATNFCP          GWC+PP  HF
Subjt:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPNHHF

Query:  DLLQPIFRQKYSY
        DL QP+F++   Y
Subjt:  DLLQPIFRQKYSY

AT1G69530.5 expansin A17.0e-2246.9Show/hide
Query:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPNHHF
        GW NAHATFYGG DASGT+G   G+ NL S                       CFE+RC ND K C+P   VVTATNFCP          GWC+PP  HF
Subjt:  GWTNAHATFYGGSDASGTIG--FGFMNLESPKL-------------------TCFELRCVNDSKRCIPAPFVVTATNFCP--------LDGWCDPPNHHF

Query:  DLLQPIFRQKYSY
        DL QP+F++   Y
Subjt:  DLLQPIFRQKYSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTCACTCGAGGGCTGAAGCGCTTGTCCTTGAGTCTGAAGCTTCATCAATTGATTCTTGAAGCTCTTGAAGTCTTAGAATCTTGGAGTCTTGAAGAGTCTTTGCT
TCTCACACCCAAATCTAAACAACGCCCTCCATTGTCTCTTCTATCTCTCTCACAAGTTCTTGCAATCATGGGTACTTTAATTCAAGAAAGCCTCGAAATCACAACGTACT
ACCCTGCAAACTTCATCTTCAAGGCCATCGCCCTCGACTATGCCAAGGACATTCCCGAAGCCGCTCGTTGTATTATTTCGAGCATCACAAACATCAACGGAAAATCTGGC
CCCGGTAGCATCGATCAGATCAACTTCAATCAAGGTTGGACCAATGCCCATGCCACTTTCTATGGTGGAAGTGATGCTTCTGGGACAATTGGGTTTGGCTTTATGAACCT
TGAAAGTCCAAAATTGACTTGCTTTGAGCTGCGGTGTGTGAATGACTCAAAGCGGTGTATTCCGGCACCATTTGTTGTCACTGCGACTAACTTTTGCCCTCTCGACGGCT
GGTGCGACCCTCCCAACCACCATTTTGACCTCTTGCAGCCAATATTTCGGCAAAAGTACTCGTACCTTAGGATGAAGGTGATAATAGTGAACAGCAAGGAGTTGATCTTC
AAGTTCGACATAACTGAAGGGGACGCCCTACAAAATCTATTCACCAAGATAGAGGTAACTATAACCATCATGCAAATGAAAAAATTTGAGTCCTTGTTCAACGCCGATGT
CCTCTTCTATGCACACAATAACGACGAGATAACCAACAAAGCAGTCCAGGAGGCAATGGTGAACGCTGAAGTGCTTTTCCATCTCGTCGATGACTATCTGAAGTCACGTG
TCATTGTGGTAATTGTAGACCAGTCTGATGCACAAGGAGCTAACAAGGACAATCAGGCAGACCAGAAAACCGACTCAGAGGAAGACCAGACCAAAGGGTCGGGCCAATTT
GGCCCGACCCATATGGTCGGCCTCAACCTGGCCGAGCTCGTTCGCCTCCGTTCGATCCCTGCTGCCTCTGACCGCCTCGGTTCCGTCTGGTTCGTCCCGAAACGCCTCCG
AATTCCTAAAAACCCTAGGAGCATGAGCAGGCGACCTCTTCTCGAGGCCATCGCCGTCAACTATGCCAAGGACCTTCCTCGTGCCGCTCCTTGTATTATATTTCGACCAT
TATTAACCTCAACAACACATCTGGTCCTGGTAGCATCGATCAAATCAACTTCGCTCCAGCACCACACCGGTGTGCAGGTTTTCTCCCTTTTGCAGGCCACGTCTTCCCCC
TCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGTTTATCTTCAAGTTCGACATAATCGAAGGGGTCGCCCTACAAAATCTATTCACCAAGATAGAGGTAGATAT
AAGCATCATCGCACATCGAGGATTTTTGAGGTCCACCTTCACGGCCAACGTCTTGTTCTATGCAAAGCAAGACAACGAGAAAACCAGACAGGCAGTCCGGGAGGCAATGA
TGAACGCTAAAGTGCTTTTCCATCTCGTCGATGACTATTTGAAGTCACGTCCCATTGTGGTACCGTTAGGTCCTGTTGTATTTTTTGATATCCCTCATTCTGATTGTAAA
AGTGAGTTTATGGGTCATTTTGTATTTGGGCCTTTGTTGTTAAAACAGGTTTTGTTTTATGGGCCTTTTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTCACTCGAGGGCTGAAGCGCTTGTCCTTGAGTCTGAAGCTTCATCAATTGATTCTTGAAGCTCTTGAAGTCTTAGAATCTTGGAGTCTTGAAGAGTCTTTGCT
TCTCACACCCAAATCTAAACAACGCCCTCCATTGTCTCTTCTATCTCTCTCACAAGTTCTTGCAATCATGGGTACTTTAATTCAAGAAAGCCTCGAAATCACAACGTACT
ACCCTGCAAACTTCATCTTCAAGGCCATCGCCCTCGACTATGCCAAGGACATTCCCGAAGCCGCTCGTTGTATTATTTCGAGCATCACAAACATCAACGGAAAATCTGGC
CCCGGTAGCATCGATCAGATCAACTTCAATCAAGGTTGGACCAATGCCCATGCCACTTTCTATGGTGGAAGTGATGCTTCTGGGACAATTGGGTTTGGCTTTATGAACCT
TGAAAGTCCAAAATTGACTTGCTTTGAGCTGCGGTGTGTGAATGACTCAAAGCGGTGTATTCCGGCACCATTTGTTGTCACTGCGACTAACTTTTGCCCTCTCGACGGCT
GGTGCGACCCTCCCAACCACCATTTTGACCTCTTGCAGCCAATATTTCGGCAAAAGTACTCGTACCTTAGGATGAAGGTGATAATAGTGAACAGCAAGGAGTTGATCTTC
AAGTTCGACATAACTGAAGGGGACGCCCTACAAAATCTATTCACCAAGATAGAGGTAACTATAACCATCATGCAAATGAAAAAATTTGAGTCCTTGTTCAACGCCGATGT
CCTCTTCTATGCACACAATAACGACGAGATAACCAACAAAGCAGTCCAGGAGGCAATGGTGAACGCTGAAGTGCTTTTCCATCTCGTCGATGACTATCTGAAGTCACGTG
TCATTGTGGTAATTGTAGACCAGTCTGATGCACAAGGAGCTAACAAGGACAATCAGGCAGACCAGAAAACCGACTCAGAGGAAGACCAGACCAAAGGGTCGGGCCAATTT
GGCCCGACCCATATGGTCGGCCTCAACCTGGCCGAGCTCGTTCGCCTCCGTTCGATCCCTGCTGCCTCTGACCGCCTCGGTTCCGTCTGGTTCGTCCCGAAACGCCTCCG
AATTCCTAAAAACCCTAGGAGCATGAGCAGGCGACCTCTTCTCGAGGCCATCGCCGTCAACTATGCCAAGGACCTTCCTCGTGCCGCTCCTTGTATTATATTTCGACCAT
TATTAACCTCAACAACACATCTGGTCCTGGTAGCATCGATCAAATCAACTTCGCTCCAGCACCACACCGGTGTGCAGGTTTTCTCCCTTTTGCAGGCCACGTCTTCCCCC
TCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGTTTATCTTCAAGTTCGACATAATCGAAGGGGTCGCCCTACAAAATCTATTCACCAAGATAGAGGTAGATAT
AAGCATCATCGCACATCGAGGATTTTTGAGGTCCACCTTCACGGCCAACGTCTTGTTCTATGCAAAGCAAGACAACGAGAAAACCAGACAGGCAGTCCGGGAGGCAATGA
TGAACGCTAAAGTGCTTTTCCATCTCGTCGATGACTATTTGAAGTCACGTCCCATTGTGGTACCGTTAGGTCCTGTTGTATTTTTTGATATCCCTCATTCTGATTGTAAA
AGTGAGTTTATGGGTCATTTTGTATTTGGGCCTTTGTTGTTAAAACAGGTTTTGTTTTATGGGCCTTTTGGTTAA
Protein sequenceShow/hide protein sequence
MCFTRGLKRLSLSLKLHQLILEALEVLESWSLEESLLLTPKSKQRPPLSLLSLSQVLAIMGTLIQESLEITTYYPANFIFKAIALDYAKDIPEAARCIISSITNINGKSG
PGSIDQINFNQGWTNAHATFYGGSDASGTIGFGFMNLESPKLTCFELRCVNDSKRCIPAPFVVTATNFCPLDGWCDPPNHHFDLLQPIFRQKYSYLRMKVIIVNSKELIF
KFDITEGDALQNLFTKIEVTITIMQMKKFESLFNADVLFYAHNNDEITNKAVQEAMVNAEVLFHLVDDYLKSRVIVVIVDQSDAQGANKDNQADQKTDSEEDQTKGSGQF
GPTHMVGLNLAELVRLRSIPAASDRLGSVWFVPKRLRIPKNPRSMSRRPLLEAIAVNYAKDLPRAAPCIIFRPLLTSTTHLVLVASIKSTSLQHHTGVQVFSLLQATSSP
SSTNLPLVAREGQFIFKFDIIEGVALQNLFTKIEVDISIIAHRGFLRSTFTANVLFYAKQDNEKTRQAVREAMMNAKVLFHLVDDYLKSRPIVVPLGPVVFFDIPHSDCK
SEFMGHFVFGPLLLKQVLFYGPFG