; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032070 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032070
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionC2H2-type domain-containing protein
Genome locationscaffold11:40576262..40577008
RNA-Seq ExpressionSpg032070
SyntenySpg032070
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049241.1 hypothetical protein E6C27_scaffold171G004810 [Cucumis melo var. makuwa]1.5e-9274.3Show/hide
Query:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN
        MA LLQ PLFALFFLT+FSPS + PWNSS F KSG NPS +++L  S E+S RPS R+NTIFGAPCGLCGQVIFGSEALNHHYNYHFLQ+ELASF   SN
Subjt:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN

Query:  PCSGSSQRPPSWANYFHGQSSASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ
        PCSG S RPP    +FHGQ+SASREPQMTLNDYLTM     PPSLRS+SGAA+DMAH LPLHPLLA+PPP PRT+  N +N QQNQA A    QRRQGNQ
Subjt:  PCSGSSQRPPSWANYFHGQSSASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ

Query:  IRWNNGGGRAAVGRPAAEPQPPQDVIDL-NEEHDCSSDGSEGLDLTLSL
        IRWNNG  R   G+PA+E QPPQDVIDL +EE+DCSSDGSEGLDLTLSL
Subjt:  IRWNNGGGRAAVGRPAAEPQPPQDVIDL-NEEHDCSSDGSEGLDLTLSL

KAG6582389.1 hypothetical protein SDJN03_22391, partial [Cucurbita argyrosperma subsp. sororia]5.8e-2340.08Show/hide
Query:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQS-----ELASF
        MA LL+AP           PS  FPW SSPFDKS WNPSF+ELL  S +TS RP  RKNTIFGAPCGLCGQ I  SE LNHH     L S      + S 
Subjt:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQS-----ELASF

Query:  GSRSNPCSGSSQRPPSWANYFHGQSSASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQR
          +    +   Q  P W +    +         T ND L +       S + +   AVDMAH LPLHPLLAQPPP   T                     
Subjt:  GSRSNPCSGSSQRPPSWANYFHGQSSASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQR

Query:  RQGNQIRWNNGGGRAAVGRPAAEPQPPQDVIDLNEEHDCSSDGSEGLDLTLS
           N+IR   G                      N E++CSS GSE LDLTLS
Subjt:  RQGNQIRWNNGGGRAAVGRPAAEPQPPQDVIDLNEEHDCSSDGSEGLDLTLS

KAG6597359.1 hypothetical protein SDJN03_10539, partial [Cucurbita argyrosperma subsp. sororia]7.6e-9274.3Show/hide
Query:  LLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSNPC
        L L   L  LFFLTAFSPSLAFPW+SSP++KSGWNPS EELL ASGETS RP RRK+TIFGAPCGLCGQVIFGSEALNHHYNYHFLQ++LAS+GSR  P 
Subjt:  LLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSNPC

Query:  SGSSQRPPSWANYFHGQSSASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQIR
        S SSQRPP W +YFHGQ+SASREPQ+TLN+ LTMPPPRQP SLRSY    VDMAHLLPLHPLLAQPPPP R T ANG+    N+ AA   GQR QGNQ +
Subjt:  SGSSQRPPSWANYFHGQSSASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQIR

Query:  WNNGGGRAAVGRPAAEP-QPPQDVIDLN--EEHDCSSDGSEGLDLTLSL
         NNGG R    R AAE  QP Q+VIDLN  EE+DCSSDGS+GLDLTLSL
Subjt:  WNNGGGRAAVGRPAAEP-QPPQDVIDLN--EEHDCSSDGSEGLDLTLSL

KGN56847.1 hypothetical protein Csa_010766 [Cucumis sativus]1.9e-9876.71Show/hide
Query:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN
        M  LLQ PLFALFFLT+FSPSL+FP NSS F +S  NPS   +L  S E+SGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQ+ELASF   SN
Subjt:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN

Query:  PCSGSSQRPPSWANYFHGQSSASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ
        P SG SQRPP W+NYFHGQ+SASREPQMTLNDYLTM     PPSLRSYSGAA+DMAH LPLHPLLAQPPP PRT+ AN +N QQNQA A   G RRQGNQ
Subjt:  PCSGSSQRPPSWANYFHGQSSASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ

Query:  IRWNNGGGRAAVGRPAAEPQPPQDVIDLN-EEHDCSSDGSEGLDLTLSL
        ++WNNGG R   G+PA+E QPPQDVIDLN EE+DCSSD SEGLDLTLSL
Subjt:  IRWNNGGGRAAVGRPAAEPQPPQDVIDLN-EEHDCSSDGSEGLDLTLSL

TrEMBL top hitse value%identityAlignment
A0A0A0L892 C2H2-type domain-containing protein9.1e-9976.71Show/hide
Query:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN
        M  LLQ PLFALFFLT+FSPSL+FP NSS F +S  NPS   +L  S E+SGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQ+ELASF   SN
Subjt:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN

Query:  PCSGSSQRPPSWANYFHGQSSASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ
        P SG SQRPP W+NYFHGQ+SASREPQMTLNDYLTM     PPSLRSYSGAA+DMAH LPLHPLLAQPPP PRT+ AN +N QQNQA A   G RRQGNQ
Subjt:  PCSGSSQRPPSWANYFHGQSSASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ

Query:  IRWNNGGGRAAVGRPAAEPQPPQDVIDLN-EEHDCSSDGSEGLDLTLSL
        ++WNNGG R   G+PA+E QPPQDVIDLN EE+DCSSD SEGLDLTLSL
Subjt:  IRWNNGGGRAAVGRPAAEPQPPQDVIDLN-EEHDCSSDGSEGLDLTLSL

A0A5A7U6I9 C2H2-type domain-containing protein7.4e-9374.3Show/hide
Query:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN
        MA LLQ PLFALFFLT+FSPS + PWNSS F KSG NPS +++L  S E+S RPS R+NTIFGAPCGLCGQVIFGSEALNHHYNYHFLQ+ELASF   SN
Subjt:  MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSN

Query:  PCSGSSQRPPSWANYFHGQSSASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ
        PCSG S RPP    +FHGQ+SASREPQMTLNDYLTM     PPSLRS+SGAA+DMAH LPLHPLLA+PPP PRT+  N +N QQNQA A    QRRQGNQ
Subjt:  PCSGSSQRPPSWANYFHGQSSASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQ

Query:  IRWNNGGGRAAVGRPAAEPQPPQDVIDL-NEEHDCSSDGSEGLDLTLSL
        IRWNNG  R   G+PA+E QPPQDVIDL +EE+DCSSDGSEGLDLTLSL
Subjt:  IRWNNGGGRAAVGRPAAEPQPPQDVIDL-NEEHDCSSDGSEGLDLTLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCTCCTTCTTCAAGCTCCTCTGTTTGCTCTGTTTTTCCTCACAGCCTTCTCTCCTTCTCTGGCTTTCCCTTGGAATTCTTCCCCCTTTGATAAATCTGGCTGGAA
CCCATCATTCGAGGAGCTGTTGCTGGCCTCCGGAGAGACTTCCGGCCGGCCGTCTCGCCGGAAAAATACAATCTTTGGAGCCCCTTGTGGGCTATGTGGCCAGGTGATTT
TTGGCTCTGAAGCTCTCAATCACCATTACAATTATCATTTCTTGCAGAGTGAGCTTGCTTCTTTTGGGAGCCGTTCAAACCCTTGCTCCGGCAGCTCTCAGCGGCCGCCG
TCGTGGGCCAATTACTTCCATGGCCAATCCTCTGCTTCTCGAGAACCCCAAATGACCCTTAACGATTATTTGACGATGCCACCGCCGCGCCAGCCGCCGTCTCTGAGAAG
CTACTCCGGAGCCGCCGTCGACATGGCCCACCTGCTGCCGCTTCATCCGTTGTTGGCTCAACCGCCGCCGCCGCCGCGGACCACTGTCGCTAACGGTATTAACGTTCAAC
AGAATCAGGCTGCAGCAGGGCAGTTGGGGCAGAGGAGGCAGGGGAACCAAATTCGATGGAATAACGGCGGCGGGAGGGCGGCCGTTGGCCGGCCGGCGGCGGAGCCGCAG
CCACCGCAAGATGTGATTGATCTCAATGAGGAGCATGATTGTAGCTCGGATGGTTCAGAAGGCTTGGACTTGACATTGAGTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCTCCTTCTTCAAGCTCCTCTGTTTGCTCTGTTTTTCCTCACAGCCTTCTCTCCTTCTCTGGCTTTCCCTTGGAATTCTTCCCCCTTTGATAAATCTGGCTGGAA
CCCATCATTCGAGGAGCTGTTGCTGGCCTCCGGAGAGACTTCCGGCCGGCCGTCTCGCCGGAAAAATACAATCTTTGGAGCCCCTTGTGGGCTATGTGGCCAGGTGATTT
TTGGCTCTGAAGCTCTCAATCACCATTACAATTATCATTTCTTGCAGAGTGAGCTTGCTTCTTTTGGGAGCCGTTCAAACCCTTGCTCCGGCAGCTCTCAGCGGCCGCCG
TCGTGGGCCAATTACTTCCATGGCCAATCCTCTGCTTCTCGAGAACCCCAAATGACCCTTAACGATTATTTGACGATGCCACCGCCGCGCCAGCCGCCGTCTCTGAGAAG
CTACTCCGGAGCCGCCGTCGACATGGCCCACCTGCTGCCGCTTCATCCGTTGTTGGCTCAACCGCCGCCGCCGCCGCGGACCACTGTCGCTAACGGTATTAACGTTCAAC
AGAATCAGGCTGCAGCAGGGCAGTTGGGGCAGAGGAGGCAGGGGAACCAAATTCGATGGAATAACGGCGGCGGGAGGGCGGCCGTTGGCCGGCCGGCGGCGGAGCCGCAG
CCACCGCAAGATGTGATTGATCTCAATGAGGAGCATGATTGTAGCTCGGATGGTTCAGAAGGCTTGGACTTGACATTGAGTCTCTAA
Protein sequenceShow/hide protein sequence
MALLLQAPLFALFFLTAFSPSLAFPWNSSPFDKSGWNPSFEELLLASGETSGRPSRRKNTIFGAPCGLCGQVIFGSEALNHHYNYHFLQSELASFGSRSNPCSGSSQRPP
SWANYFHGQSSASREPQMTLNDYLTMPPPRQPPSLRSYSGAAVDMAHLLPLHPLLAQPPPPPRTTVANGINVQQNQAAAGQLGQRRQGNQIRWNNGGGRAAVGRPAAEPQ
PPQDVIDLNEEHDCSSDGSEGLDLTLSL