CuGenDBv2

Gene ID	Spg032084
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Nucleic acid-binding proteins superfamily isoform 1
Genome location	scaffold11:37073239..37075344
RNA-Seq Expression	Spg032084
Synteny	Spg032084
Gene Ontology terms	NA
InterPro domains	IPR035201 - Cell division control protein 24, OB domain 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6597573.1 hypothetical protein SDJN03_10753, partial [Cucurbita argyrosperma subsp. sororia]

7.5e-60

71.2

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Query:  SSRGRFF---NAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AWY
        SSRGR F    AGG+SAMEL+DRRRLQEEEDDDPFLKF+DYARSVLAFEDEED+DPN                                        AW 
Subjt:  SSRGRFF---NAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AWY

Query:  EQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR
        EQHR+GAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVI+EEFILPGTNIHMLTLGDFWSSNTIDLYLH R
Subjt:  EQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR

KAG7029015.1 hypothetical protein SDJN02_10198 [Cucurbita argyrosperma subsp. argyrosperma]

7.5e-60

71.2

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Query:  SSRGRFF---NAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AWY
        SSRGR F    AGG+SAMEL+DRRRLQEEEDDDPFLKF+DYARSVLAFEDEED+DPN                                        AW 
Subjt:  SSRGRFF---NAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AWY

Query:  EQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR
        EQHR+GAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVI+EEFILPGTNIHMLTLGDFWSSNTIDLYLH R
Subjt:  EQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR

XP_022938337.1 uncharacterized protein LOC111444466 [Cucurbita moschata]

7.5e-60

71.2

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Query:  SSRGRFF---NAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AWY
        SSRGR F    AGG+SAMEL+DRRRLQEEEDDDPFLKF+DYARSVLAFEDEED+DPN                                        AW 
Subjt:  SSRGRFF---NAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AWY

Query:  EQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR
        EQHR+GAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVI+EEFILPGTNIHMLTLGDFWSSNTIDLYLH R
Subjt:  EQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR

XP_022972298.1 uncharacterized protein LOC111470879 isoform X1 [Cucurbita maxima]

2.2e-59

70.65

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Query:  SSRGRFF---NAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AWY
        SSR R+F    AGG SAMEL+DRRRLQEEEDDDPFLKF+DYARSVLAFEDEED+DPN                                        AW 
Subjt:  SSRGRFF---NAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AWY

Query:  EQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR
        EQHR+GAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVI+EEFILPGTNIHMLTLGDFWSSNTIDLYLH R
Subjt:  EQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR

XP_023538883.1 uncharacterized protein LOC111799677 [Cucurbita pepo subsp. pepo]

1.5e-60

71.74

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Query:  SSRGRFFN---AGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AWY
        SSRGR FN   AGG+SAMEL+DRRRLQEEEDDDPFLKF+DYARSVLAFEDEED+DPN                                        AW 
Subjt:  SSRGRFFN---AGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AWY

Query:  EQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR
        EQHR+GAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVI+EEFILPGTNIHMLTLGDFWSSNTIDLYLH R
Subjt:  EQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AX73 uncharacterized protein LOC103483891 isoform X2

2.6e-58

69.73

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Query:  MSSRGRFFN---AGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AW
        MSS  + FN   AG  SAMELDD R+LQEE DDDPFLKFVDYARSVLAFED+ED+DPN                                        AW
Subjt:  MSSRGRFFN---AGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AW

Query:  YEQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR
        YEQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVI++EFILPGTNIHMLTLGDFWSSNTIDLYLHRR
Subjt:  YEQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR

A0A1S4DSK5 uncharacterized protein LOC103483891 isoform X1

2.6e-58

69.73

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Query:  MSSRGRFFN---AGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AW
        MSS  + FN   AG  SAMELDD R+LQEE DDDPFLKFVDYARSVLAFED+ED+DPN                                        AW
Subjt:  MSSRGRFFN---AGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AW

Query:  YEQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR
        YEQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVI++EFILPGTNIHMLTLGDFWSSNTIDLYLHRR
Subjt:  YEQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR

A0A5A7U7H0 Nucleic acid-binding proteins superfamily isoform 1

4.4e-58

69.19

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Query:  MSSRGRFFN---AGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AW
        MSS  + FN   AG  SAMELDD R+LQEE DDDPFLKFVDYARSVLAFED+ED+DPN                                        AW
Subjt:  MSSRGRFFN---AGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AW

Query:  YEQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR
        YEQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLS+SSVLEAVI++EFILPGTNIHMLTLGDFWSSNTIDLYLHRR
Subjt:  YEQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR

A0A6J1FDS0 uncharacterized protein LOC111444466

3.6e-60

71.2

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Query:  SSRGRFF---NAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AWY
        SSRGR F    AGG+SAMEL+DRRRLQEEEDDDPFLKF+DYARSVLAFEDEED+DPN                                        AW 
Subjt:  SSRGRFF---NAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AWY

Query:  EQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR
        EQHR+GAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVI+EEFILPGTNIHMLTLGDFWSSNTIDLYLH R
Subjt:  EQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR

A0A6J1IB36 uncharacterized protein LOC111470879 isoform X1

1.1e-59

70.65

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Query:  SSRGRFF---NAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AWY
        SSR R+F    AGG SAMEL+DRRRLQEEEDDDPFLKF+DYARSVLAFEDEED+DPN                                        AW 
Subjt:  SSRGRFF---NAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPN----------------------------------------AWY

Query:  EQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR
        EQHR+GAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVI+EEFILPGTNIHMLTLGDFWSSNTIDLYLH R
Subjt:  EQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G17030.1 Nucleic acid-binding proteins superfamily

2.6e-34

47.22

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Query:  NAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYD----------------------------------------------PNAWYEQHR
        +  G+S +E+ D     +EE +DPFL F+DYAR+V++ ED+ED                                                  AW+EQ++
Subjt:  NAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYD----------------------------------------------PNAWYEQHR

Query:  VGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR
         G  KK PE I+QLKK +RR++L  TVTIDSIYEKNFLS++SVLEAVII   +LPGTNI MLTLGDFWSSNTIDLYLHRR
Subjt:  VGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVIIEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR

Sequences

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CDS sequence

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ATGTCTTCTCGGGGCCGATTTTTCAACGCCGGCGGAAGCTCAGCCATGGAGTTAGATGATCGCCGACGGCTGCAGGAAGAAGAAGATGATGATCCGTTTCTTAAATTTGT
CGATTACGCGAGGTCTGTGCTAGCATTCGAAGACGAAGAAGACTACGATCCTAATGCCTGGTATGAGCAGCACAGAGTTGGGGCTCCCAAGAAAATACCTGAATGTATTA
ATCAGTTGAAGAAGAAGAATAGGAGAAAGAAGCTCCCAAAAACAGTTACTATCGACTCCATATATGAGAAAAATTTCCTATCTTTAAGTAGTGTATTGGAAGCTGTTATT
ATTGAGGAGTTTATTCTTCCAGGTACAAATATACACATGCTTACTTTGGGGGATTTTTGGAGCTCTAATACGATTGATCTTTATCTCCATCGCAGGTAA

mRNA sequence

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Protein sequence

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MSSRGRFFNAGGSSAMELDDRRRLQEEEDDDPFLKFVDYARSVLAFEDEEDYDPNAWYEQHRVGAPKKIPECINQLKKKNRRKKLPKTVTIDSIYEKNFLSLSSVLEAVI
IEEFILPGTNIHMLTLGDFWSSNTIDLYLHRR

Spg032084 (gene) of Sponge gourd (cylindrica) v1 genome