; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032108 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032108
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMediator of RNA polymerase II transcription subunit 2-like
Genome locationscaffold11:43262487..43264962
RNA-Seq ExpressionSpg032108
SyntenySpg032108
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048973.1 mediator of RNA polymerase II transcription subunit 2-like [Cucumis melo var. makuwa]3.1e-2693.83Show/hide
Query:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRKKQ+EFDLQREKQEKEKAAKKLQAKKN MKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKA+QAM+LDK
Subjt:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
KGN56523.1 hypothetical protein Csa_010072 [Cucumis sativus]4.0e-2693.83Show/hide
Query:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRKKQ+EFDLQREKQEKEKAAKKLQAKKN MKVDGSGKKKKGGGGFQVGKKKVKTKLTA AKAKA+QAMELDK
Subjt:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
XP_022147302.1 uncharacterized protein LOC111016287 [Momordica charantia]5.3e-2692.59Show/hide
Query:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRKKQHEFDL+REK E+EKAAKKLQAKKN+MKVDGSGK+KKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELD+
Subjt:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
XP_022941890.1 uncharacterized protein LOC111447114 [Cucurbita moschata]4.8e-2796.3Show/hide
Query:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRK QHEFDL+REKQEKEKAAKKLQAKKNKMKVDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
XP_030457135.1 uncharacterized protein LOC115678006 [Syzygium oleosum]2.2e-2490.12Show/hide
Query:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRKKQ+EFDL+REK EKEKAAKKLQAKKNKMKVDGSGKKKKG GGFQVGK+K+KTKLTA AKAKAAQAMELDK
Subjt:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
TrEMBL top hitse value%identityAlignment
A0A0A0L493 Uncharacterized protein2.0e-2693.83Show/hide
Query:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRKKQ+EFDLQREKQEKEKAAKKLQAKKN MKVDGSGKKKKGGGGFQVGKKKVKTKLTA AKAKA+QAMELDK
Subjt:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A5A7TZC8 Mediator of RNA polymerase II transcription subunit 2-like1.5e-2693.83Show/hide
Query:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKN+LSRRKKQ+EFDLQREKQEKEKAAKKLQAKKN MKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKA+QAM+LDK
Subjt:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A6J1D208 uncharacterized protein LOC1110162872.6e-2692.59Show/hide
Query:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRKKQHEFDL+REK E+EKAAKKLQAKKN+MKVDGSGK+KKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELD+
Subjt:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A6J1FV29 uncharacterized protein LOC1114471142.3e-2796.3Show/hide
Query:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRK QHEFDL+REKQEKEKAAKKLQAKKNKMKVDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
A0A6J1IED7 uncharacterized protein LOC1114732882.3e-2796.3Show/hide
Query:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
        MSKKNNLSRRK QHEFDL+REKQEKEKAAKKLQAKKNKMKVDGSGKKKKGG GFQVGKKKVKTKLTAAAKAKAAQAMELDK
Subjt:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G45860.1 unknown protein2.4e-2176.25Show/hide
Query:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELD
        MSKKNNL++RKKQHE++LQ+EK+ ++K  KKL A KNKMKVDGSGKKKK  GGF VGKKK+KTKLT  AKAKAAQAMELD
Subjt:  MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGAAGAATAATCTTTCGCGCAGGAAGAAGCAACATGAATTCGACCTTCAAAGGGAGAAACAAGAAAAAGAAAAGGCCGCGAAGAAGCTCCAAGCAAAGAAGAA
TAAGATGAAAGTTGATGGTAGTGGAAAGAAAAAGAAGGGTGGAGGTGGATTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACAGCAGCGGCAAAGGCAAAAGCTG
CCCAAGCAATGGAGCTTGATAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAGAAGAATAATCTTTCGCGCAGGAAGAAGCAACATGAATTCGACCTTCAAAGGGAGAAACAAGAAAAAGAAAAGGCCGCGAAGAAGCTCCAAGCAAAGAAGAA
TAAGATGAAAGTTGATGGTAGTGGAAAGAAAAAGAAGGGTGGAGGTGGATTTCAAGTTGGGAAGAAAAAAGTGAAGACCAAGTTGACAGCAGCGGCAAAGGCAAAAGCTG
CCCAAGCAATGGAGCTTGATAAATGA
Protein sequenceShow/hide protein sequence
MSKKNNLSRRKKQHEFDLQREKQEKEKAAKKLQAKKNKMKVDGSGKKKKGGGGFQVGKKKVKTKLTAAAKAKAAQAMELDK