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Spg032202 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032202
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold2:36643915..36645517
RNA-Seq ExpressionSpg032202
SyntenySpg032202
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]1.7e-1447.2Show/hide
Query:  GGPHY-------------IGTSKRWLYWACPTQQRSVML----------VEIELPVPDTLPTSAESSRSSSSSTLQEGQRISLEEDDVRWLHAIFRTELA
        GGPHY               TSKRWLYWACPT +RSVML          VEIEL VPDTLPTSAESS S+S S         +  DDV WLH +FR +  
Subjt:  GGPHY-------------IGTSKRWLYWACPTQQRSVML----------VEIELPVPDTLPTSAESSRSSSSSTLQEGQRISLEEDDVRWLHAIFRTELA

Query:  GGLGGAGVTNTREGLTYCIGRYPWT
        GG GG+        +TY  G  P T
Subjt:  GGLGGAGVTNTREGLTYCIGRYPWT

KAA0066851.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-1043.7Show/hide
Query:  MIEILSPRLYGSECWAGPTTTKTMGVLGGPHYIGTSKRWLYWACPTQQRSVMLVEIELPVPDTLPTSAESSRSSSSSTLQ---EGQRISL-------EED
        M EILSPRLYG+ C        T+ VL                    + +  +VEIELPVPDTLPTSAESS S+SS+ L+   E   + +        ED
Subjt:  MIEILSPRLYGSECWAGPTTTKTMGVLGGPHYIGTSKRWLYWACPTQQRSVMLVEIELPVPDTLPTSAESSRSSSSSTLQ---EGQRISL-------EED

Query:  DVRWLHAIFRTELAGGLGG
        DV WLHA+FR + AGG GG
Subjt:  DVRWLHAIFRTELAGGLGG

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]6.0e-1544.6Show/hide
Query:  GGPHY-------------IGTSKRWLYWACPTQQRSVML----------VEIELPVPDTLPTSAESSRSSSSSTLQEGQRISLEEDDVRWLHAIFRTELA
        GGPHY               TSKRWLYWACPT +RSVML          VEIEL VPDTLPTSAESS S+S S         +  DDV WLH +FR +  
Subjt:  GGPHY-------------IGTSKRWLYWACPTQQRSVML----------VEIELPVPDTLPTSAESSRSSSSSTLQEGQRISLEEDDVRWLHAIFRTELA

Query:  GGLGGAGVTNTREGLTYCIGRYPWTQKYSTVRRVQLSVG
        GG GG+        +TY  G  P T      R+  L  G
Subjt:  GGLGGAGVTNTREGLTYCIGRYPWTQKYSTVRRVQLSVG

TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]1.1e-0840.99Show/hide
Query:  MIEILSPRLYGSEC--WAGPTTT-------------------KTMGVLGGPHYI------GTSKRWLYWACPTQQRSVMLVEIELPVPDTLPTSAESSRS
        M EILS RLYG+ C     P +T                   K  GV GGPHYI      G + R L+       RS   +EIEL VPDTLPTSAESS S
Subjt:  MIEILSPRLYGSEC--WAGPTTT-------------------KTMGVLGGPHYI------GTSKRWLYWACPTQQRSVMLVEIELPVPDTLPTSAESSRS

Query:  SSS-------------STLQEGQRISLE--------EDDVRWLHAIFRTELAGGLGGAGVT
        +SS             S ++   RI  E        E+DV WLHA+FR ++AGG GG GVT
Subjt:  SSS-------------STLQEGQRISLE--------EDDVRWLHAIFRTELAGGLGGAGVT

TYK27998.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-1043.7Show/hide
Query:  MIEILSPRLYGSECWAGPTTTKTMGVLGGPHYIGTSKRWLYWACPTQQRSVMLVEIELPVPDTLPTSAESSRSSSSSTLQ---EGQRISL-------EED
        M EILSPRLYG+ C        T+ VL                    + +  +VEIELPVPDTLPTSAESS S+SS+ L+   E   + +        ED
Subjt:  MIEILSPRLYGSECWAGPTTTKTMGVLGGPHYIGTSKRWLYWACPTQQRSVMLVEIELPVPDTLPTSAESSRSSSSSTLQ---EGQRISL-------EED

Query:  DVRWLHAIFRTELAGGLGG
        DV WLHA+FR + AGG GG
Subjt:  DVRWLHAIFRTELAGGLGG

TrEMBL top hitse value%identityAlignment
A0A5A7VGQ5 Uncharacterized protein8.4e-1547.2Show/hide
Query:  GGPHY-------------IGTSKRWLYWACPTQQRSVML----------VEIELPVPDTLPTSAESSRSSSSSTLQEGQRISLEEDDVRWLHAIFRTELA
        GGPHY               TSKRWLYWACPT +RSVML          VEIEL VPDTLPTSAESS S+S S         +  DDV WLH +FR +  
Subjt:  GGPHY-------------IGTSKRWLYWACPTQQRSVML----------VEIELPVPDTLPTSAESSRSSSSSTLQEGQRISLEEDDVRWLHAIFRTELA

Query:  GGLGGAGVTNTREGLTYCIGRYPWT
        GG GG+        +TY  G  P T
Subjt:  GGLGGAGVTNTREGLTYCIGRYPWT

A0A5A7VMG9 Reverse transcriptase5.7e-1143.7Show/hide
Query:  MIEILSPRLYGSECWAGPTTTKTMGVLGGPHYIGTSKRWLYWACPTQQRSVMLVEIELPVPDTLPTSAESSRSSSSSTLQ---EGQRISL-------EED
        M EILSPRLYG+ C        T+ VL                    + +  +VEIELPVPDTLPTSAESS S+SS+ L+   E   + +        ED
Subjt:  MIEILSPRLYGSECWAGPTTTKTMGVLGGPHYIGTSKRWLYWACPTQQRSVMLVEIELPVPDTLPTSAESSRSSSSSTLQ---EGQRISL-------EED

Query:  DVRWLHAIFRTELAGGLGG
        DV WLHA+FR + AGG GG
Subjt:  DVRWLHAIFRTELAGGLGG

A0A5D3BG85 Uncharacterized protein2.9e-1544.6Show/hide
Query:  GGPHY-------------IGTSKRWLYWACPTQQRSVML----------VEIELPVPDTLPTSAESSRSSSSSTLQEGQRISLEEDDVRWLHAIFRTELA
        GGPHY               TSKRWLYWACPT +RSVML          VEIEL VPDTLPTSAESS S+S S         +  DDV WLH +FR +  
Subjt:  GGPHY-------------IGTSKRWLYWACPTQQRSVML----------VEIELPVPDTLPTSAESSRSSSSSTLQEGQRISLEEDDVRWLHAIFRTELA

Query:  GGLGGAGVTNTREGLTYCIGRYPWTQKYSTVRRVQLSVG
        GG GG+        +TY  G  P T      R+  L  G
Subjt:  GGLGGAGVTNTREGLTYCIGRYPWTQKYSTVRRVQLSVG

A0A5D3CAC6 Uncharacterized protein5.3e-0940.99Show/hide
Query:  MIEILSPRLYGSEC--WAGPTTT-------------------KTMGVLGGPHYI------GTSKRWLYWACPTQQRSVMLVEIELPVPDTLPTSAESSRS
        M EILS RLYG+ C     P +T                   K  GV GGPHYI      G + R L+       RS   +EIEL VPDTLPTSAESS S
Subjt:  MIEILSPRLYGSEC--WAGPTTT-------------------KTMGVLGGPHYI------GTSKRWLYWACPTQQRSVMLVEIELPVPDTLPTSAESSRS

Query:  SSS-------------STLQEGQRISLE--------EDDVRWLHAIFRTELAGGLGGAGVT
        +SS             S ++   RI  E        E+DV WLHA+FR ++AGG GG GVT
Subjt:  SSS-------------STLQEGQRISLE--------EDDVRWLHAIFRTELAGGLGGAGVT

A0A5D3DX39 Reverse transcriptase5.7e-1143.7Show/hide
Query:  MIEILSPRLYGSECWAGPTTTKTMGVLGGPHYIGTSKRWLYWACPTQQRSVMLVEIELPVPDTLPTSAESSRSSSSSTLQ---EGQRISL-------EED
        M EILSPRLYG+ C        T+ VL                    + +  +VEIELPVPDTLPTSAESS S+SS+ L+   E   + +        ED
Subjt:  MIEILSPRLYGSECWAGPTTTKTMGVLGGPHYIGTSKRWLYWACPTQQRSVMLVEIELPVPDTLPTSAESSRSSSSSTLQ---EGQRISL-------EED

Query:  DVRWLHAIFRTELAGGLGG
        DV WLHA+FR + AGG GG
Subjt:  DVRWLHAIFRTELAGGLGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAGATATTAAGCCCGAGGCTATATGGTTCCGAGTGCTGGGCGGGCCCCACTACAACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGGGACTAGTAA
ACGTTGGTTGTACTGGGCGTGCCCTACACAACAAAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCCAGATCAA
GCTCCAGTTCAACGTTACAGGAGGGTCAACGGATATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTGAGCTAGCAGGTGGTCTGGGTGGGGCT
GGTGTTACGAACACACGTGAAGGATTGACTTACTGCATTGGTCGATATCCGTGGACCCAGAAATATTCTACAGTGAGAAGAGTGCAGCTATCTGTAGGTCTATTAGGTCC
ACCTGCTAGCTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAGATATTAAGCCCGAGGCTATATGGTTCCGAGTGCTGGGCGGGCCCCACTACAACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGGGACTAGTAA
ACGTTGGTTGTACTGGGCGTGCCCTACACAACAAAGATCGGTCATGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTACCAACGTCTGCTGAAAGTTCCAGATCAA
GCTCCAGTTCAACGTTACAGGAGGGTCAACGGATATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTGAGCTAGCAGGTGGTCTGGGTGGGGCT
GGTGTTACGAACACACGTGAAGGATTGACTTACTGCATTGGTCGATATCCGTGGACCCAGAAATATTCTACAGTGAGAAGAGTGCAGCTATCTGTAGGTCTATTAGGTCC
ACCTGCTAGCTCATAA
Protein sequenceShow/hide protein sequence
MIEILSPRLYGSECWAGPTTTKTMGVLGGPHYIGTSKRWLYWACPTQQRSVMLVEIELPVPDTLPTSAESSRSSSSSTLQEGQRISLEEDDVRWLHAIFRTELAGGLGGA
GVTNTREGLTYCIGRYPWTQKYSTVRRVQLSVGLLGPPASS