; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032207 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032207
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold2:36513176..36514745
RNA-Seq ExpressionSpg032207
SyntenySpg032207
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]1.2e-0531.88Show/hide
Query:  PHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQAFPRAGYNEMAIAPSNEQLNAAAREVGIEGDTGSTS
        P F+   I  HGW  FC  P      +VREFY N+ +++   V V  V V ++  AINS++ L+      Y + A   ++EQL     EV IEG T    
Subjt:  PHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQAFPRAGYNEMAIAPSNEQLNAAAREVGIEGDTGSTS

Query:  GGLVCSIHQILEQLALSASRQEFTERQAHTFWNYVKRR
                QI  Q A +  R+E  +R A  +++++  R
Subjt:  GGLVCSIHQILEQLALSASRQEFTERQAHTFWNYVKRR

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]5.6e-0633.67Show/hide
Query:  FLNHFARAKYIDMLKRDFLFERGF------SGDLPHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQ
        F++  A+  Y  +  R   FE GF      + +L   +   +T H W+ F   P PVN+ +V+EFY NI E +   V V G+++ ++P AIN  + LQ
Subjt:  FLNHFARAKYIDMLKRDFLFERGF------SGDLPHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQ

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]2.9e-0734.68Show/hide
Query:  ARAKYIDMLK-RDFLFERGFSGD------LPHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQAFPRAG
        A  +Y + ++ R    E+GF GD       P F+   IT H W+LFC+ P+ + + +VREFY N+   D   V V GV V  S  AIN++Y L   P   
Subjt:  ARAKYIDMLK-RDFLFERGFSGD------LPHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQAFPRAG

Query:  YNEMAIAPSNEQLNAAAREVGIEG
        ++E   A +  +L      V I G
Subjt:  YNEMAIAPSNEQLNAAAREVGIEG

PON65868.1 hypothetical protein PanWU01x14_113570 [Parasponia andersonii]2.5e-0634.11Show/hide
Query:  FLNHFARAKYIDMLK-RDFLFERGFSGD------LPHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQA
        F +  A  +Y + ++ R    E+GF GD       P F+   IT H W+LFC+ P+     +VREFY N+   D   V V GV V  S  AIN++Y L  
Subjt:  FLNHFARAKYIDMLK-RDFLFERGFSGD------LPHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQA

Query:  FPRAGYNEMAIAPSNEQLNAAAREVGIEG
         P   ++E   A +  +L      V I G
Subjt:  FPRAGYNEMAIAPSNEQLNAAAREVGIEG

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.6e-0544.3Show/hide
Query:  QILEQLALSASRQEFTERQAHTFWNYVKRRDAALRKALQANFSKPYPTFPLFPDDLLNPWIPPPPVEREEEDDDAGQED
        Q L+ L    S+QE T +Q   FW Y K RD AL+KALQ NF++P PTFP FP ++L         E E E D  G  +
Subjt:  QILEQLALSASRQEFTERQAHTFWNYVKRRDAALRKALQANFSKPYPTFPLFPDDLLNPWIPPPPVEREEEDDDAGQED

TrEMBL top hitse value%identityAlignment
A0A2P5B0K0 Uncharacterized protein1.4e-0734.68Show/hide
Query:  ARAKYIDMLK-RDFLFERGFSGD------LPHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQAFPRAG
        A  +Y + ++ R    E+GF GD       P F+   IT H W+LFC+ P+ + + +VREFY N+   D   V V GV V  S  AIN++Y L   P   
Subjt:  ARAKYIDMLK-RDFLFERGFSGD------LPHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQAFPRAG

Query:  YNEMAIAPSNEQLNAAAREVGIEG
        ++E   A +  +L      V I G
Subjt:  YNEMAIAPSNEQLNAAAREVGIEG

A0A2P5CXV1 Uncharacterized protein1.2e-0634.11Show/hide
Query:  FLNHFARAKYIDMLK-RDFLFERGFSGD------LPHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQA
        F +  A  +Y + ++ R    E+GF GD       P F+   IT H W+LFC+ P+     +VREFY N+   D   V V GV V  S  AIN++Y L  
Subjt:  FLNHFARAKYIDMLK-RDFLFERGFSGD------LPHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQA

Query:  FPRAGYNEMAIAPSNEQLNAAAREVGIEG
         P   ++E   A +  +L      V I G
Subjt:  FPRAGYNEMAIAPSNEQLNAAAREVGIEG

A0A2P5DXM3 Uncharacterized protein7.8e-0644.3Show/hide
Query:  QILEQLALSASRQEFTERQAHTFWNYVKRRDAALRKALQANFSKPYPTFPLFPDDLLNPWIPPPPVEREEEDDDAGQED
        Q L+ L    S+QE T +Q   FW Y K RD AL+KALQ NF++P PTFP FP ++L         E E E D  G  +
Subjt:  QILEQLALSASRQEFTERQAHTFWNYVKRRDAALRKALQANFSKPYPTFPLFPDDLLNPWIPPPPVEREEEDDDAGQED

A0A6A2ZUE4 Uncharacterized protein2.7e-0633.67Show/hide
Query:  FLNHFARAKYIDMLKRDFLFERGF------SGDLPHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQ
        F++  A+  Y  +  R   FE GF      + +L   +   +T H W+ F   P PVN+ +V+EFY NI E +   V V G+++ ++P AIN  + LQ
Subjt:  FLNHFARAKYIDMLKRDFLFERGF------SGDLPHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQ

W9QTD9 Uncharacterized protein6.0e-0631.88Show/hide
Query:  PHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQAFPRAGYNEMAIAPSNEQLNAAAREVGIEGDTGSTS
        P F+   I  HGW  FC  P      +VREFY N+ +++   V V  V V ++  AINS++ L+      Y + A   ++EQL     EV IEG T    
Subjt:  PHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYDGFQVKVCGVAVDWSPGAINSLYNLQAFPRAGYNEMAIAPSNEQLNAAAREVGIEGDTGSTS

Query:  GGLVCSIHQILEQLALSASRQEFTERQAHTFWNYVKRR
                QI  Q A +  R+E  +R A  +++++  R
Subjt:  GGLVCSIHQILEQLALSASRQEFTERQAHTFWNYVKRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAATGAGAGGAAAGAAAGAGAGTGAAGTGGAGGAGATTGTGCCTACTACGCCTGAAGTTTGGAAGAAAAAGGCGAAGAAGAAAAGAACGCTCGTAGAAAGGGA
AGCTAAACAGCTTAAAAGACTTCAAGAGGCTGAGGTTTCCGCAGTATTAGAGAAGGTAATAAAGGACATTGCTGAGGAAGTAATCGCGGAGGAAGAACCAAAAGATTCTG
AGAAAGAAAAAGATTTTGAAAATAGTAACGGAACGGGGCAAGAGAATCAAGAAGAAGCAGCAACAGGTTTGCGAGGGACAGAGAAAGAAGAATCTGGAAATCAAGAAGAA
ATTAGGAAGAAGATTGCAGAAGATGAAAACGAGACAAGAAATGGTAAGGATAAGGGCAAAGGTATTGCATGGGCCGAGGTTGAAACAGAAGTGGCTAGCCCAGAAGAAAG
GGGGTTGCCTTATGAGCTCTTTCTCAATCATTTTGCTAGGGCAAAATATATTGACATGTTGAAAAGGGATTTCCTGTTCGAGAGAGGGTTTAGTGGTGATCTTCCGCATT
TTCTGAGGGCTGACATTACAAATCATGGCTGGGAGTTATTCTGTTCCAAGCCAGATCCTGTGAATTCTCAAGTGGTGCGAGAATTCTATGTGAATATTGACGAGTATGAT
GGTTTCCAAGTTAAAGTTTGTGGAGTAGCTGTCGACTGGAGTCCTGGTGCCATCAATTCACTGTACAACCTTCAAGCTTTCCCGCGTGCTGGTTATAATGAGATGGCAAT
AGCACCATCTAATGAGCAATTAAATGCTGCTGCTCGAGAAGTTGGAATAGAAGGGGACACAGGAAGCACGTCAGGGGGGCTAGTCTGTAGCATTCACCAAATCTTAGAAC
AACTTGCACTTTCGGCCAGCAGGCAAGAGTTCACAGAAAGGCAGGCTCATACCTTCTGGAATTATGTTAAAAGACGTGATGCTGCATTGAGGAAGGCACTGCAAGCTAAT
TTTTCCAAGCCCTACCCAACATTCCCATTATTCCCTGATGATTTGCTGAACCCCTGGATCCCACCACCACCCGTTGAGAGAGAAGAGGAAGATGATGATGCTGGTCAGGA
GGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAATGAGAGGAAAGAAAGAGAGTGAAGTGGAGGAGATTGTGCCTACTACGCCTGAAGTTTGGAAGAAAAAGGCGAAGAAGAAAAGAACGCTCGTAGAAAGGGA
AGCTAAACAGCTTAAAAGACTTCAAGAGGCTGAGGTTTCCGCAGTATTAGAGAAGGTAATAAAGGACATTGCTGAGGAAGTAATCGCGGAGGAAGAACCAAAAGATTCTG
AGAAAGAAAAAGATTTTGAAAATAGTAACGGAACGGGGCAAGAGAATCAAGAAGAAGCAGCAACAGGTTTGCGAGGGACAGAGAAAGAAGAATCTGGAAATCAAGAAGAA
ATTAGGAAGAAGATTGCAGAAGATGAAAACGAGACAAGAAATGGTAAGGATAAGGGCAAAGGTATTGCATGGGCCGAGGTTGAAACAGAAGTGGCTAGCCCAGAAGAAAG
GGGGTTGCCTTATGAGCTCTTTCTCAATCATTTTGCTAGGGCAAAATATATTGACATGTTGAAAAGGGATTTCCTGTTCGAGAGAGGGTTTAGTGGTGATCTTCCGCATT
TTCTGAGGGCTGACATTACAAATCATGGCTGGGAGTTATTCTGTTCCAAGCCAGATCCTGTGAATTCTCAAGTGGTGCGAGAATTCTATGTGAATATTGACGAGTATGAT
GGTTTCCAAGTTAAAGTTTGTGGAGTAGCTGTCGACTGGAGTCCTGGTGCCATCAATTCACTGTACAACCTTCAAGCTTTCCCGCGTGCTGGTTATAATGAGATGGCAAT
AGCACCATCTAATGAGCAATTAAATGCTGCTGCTCGAGAAGTTGGAATAGAAGGGGACACAGGAAGCACGTCAGGGGGGCTAGTCTGTAGCATTCACCAAATCTTAGAAC
AACTTGCACTTTCGGCCAGCAGGCAAGAGTTCACAGAAAGGCAGGCTCATACCTTCTGGAATTATGTTAAAAGACGTGATGCTGCATTGAGGAAGGCACTGCAAGCTAAT
TTTTCCAAGCCCTACCCAACATTCCCATTATTCCCTGATGATTTGCTGAACCCCTGGATCCCACCACCACCCGTTGAGAGAGAAGAGGAAGATGATGATGCTGGTCAGGA
GGACTAG
Protein sequenceShow/hide protein sequence
MAKMRGKKESEVEEIVPTTPEVWKKKAKKKRTLVEREAKQLKRLQEAEVSAVLEKVIKDIAEEVIAEEEPKDSEKEKDFENSNGTGQENQEEAATGLRGTEKEESGNQEE
IRKKIAEDENETRNGKDKGKGIAWAEVETEVASPEERGLPYELFLNHFARAKYIDMLKRDFLFERGFSGDLPHFLRADITNHGWELFCSKPDPVNSQVVREFYVNIDEYD
GFQVKVCGVAVDWSPGAINSLYNLQAFPRAGYNEMAIAPSNEQLNAAAREVGIEGDTGSTSGGLVCSIHQILEQLALSASRQEFTERQAHTFWNYVKRRDAALRKALQAN
FSKPYPTFPLFPDDLLNPWIPPPPVEREEEDDDAGQED