; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg032217 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032217
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold2:32806913..32812676
RNA-Seq ExpressionSpg032217
SyntenySpg032217
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041195.1 hypothetical protein E6C27_scaffold128G001430 [Cucumis melo var. makuwa]3.1e-2251.01Show/hide
Query:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQ
        M+ADQYAMDL FT VTRS++RS   Q GS  ESST PPRPS NL+RPS G VQMRPP SP+S   SSTP P++YSQAV P KR  E + + SK       
Subjt:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQ

Query:  TTSDADFQRILQMATSSRSESLATSTQGEENELD--YKLDDPYLDSQPI
                        S SES ++S Q +E ++D  Y LDDP+L+S+P+
Subjt:  TTSDADFQRILQMATSSRSESLATSTQGEENELD--YKLDDPYLDSQPI

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]7.4e-3261.49Show/hide
Query:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQ
        M+ADQYAMDLGFT VTRSR+RS   + GS  ESST PP+PSTNL+RPSGGVVQMR P SP+S   SSTP P++YSQAV P+KR        SKLLAALAQ
Subjt:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQ

Query:  TTSDADFQRILQMATSSRSESLATSTQGEENE----LDYKLDDPYLDS
         T+DADFQR+L    ++ S S + S+  +E+E    L+Y LDDPYLDS
Subjt:  TTSDADFQRILQMATSSRSESLATSTQGEENE----LDYKLDDPYLDS

KAA0066384.1 hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa]7.7e-2152.08Show/hide
Query:  ADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQTT
        ADQYAM++GFT VTRSR+RS   + GS  ES+T PPRPS NL+ PS GVVQMRPP SP+S   SSTPS ++YSQAV P+KR V     KS     +    
Subjt:  ADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQTT

Query:  SDADFQRILQMATSSRSESLATSTQGEENELD--YKLDDPYLDS
         D   +   Q+  SS S+S ++S Q +E ++D  Y LDDP+LDS
Subjt:  SDADFQRILQMATSSRSESLATSTQGEENELD--YKLDDPYLDS

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]1.3e-2345.5Show/hide
Query:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEK------------------
        M+ DQYAMDLG+T V +SR++S G    S MESST PPRPS NL+ P G V+QMR   SP+S   SST  P++YSQAV P+K                  
Subjt:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEK------------------

Query:  ---------------------RNVEFLNDKSKLLAALAQTTSDADFQRILQMA--TSSRSESLATSTQGEENELD--YKLDDPYLDSQP
                             +N +FLNDK K LAAL Q T DADFQR+L  A  TSS S+   +  Q +E ++D  Y LDDP+LDSQP
Subjt:  ---------------------RNVEFLNDKSKLLAALAQTTSDADFQRILQMA--TSSRSESLATSTQGEENELD--YKLDDPYLDSQP

TYK02422.1 hypothetical protein E5676_scaffold1738G00210 [Cucumis melo var. makuwa]1.6e-2352.35Show/hide
Query:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQ
        M+ADQYAMDLGFT VTRSR+RS   Q GS  ESST PPRPS NL+RPS G VQMRPP SP+S   SSTP P++YSQAV P  R  E + + SK +     
Subjt:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQ

Query:  TTSDADFQRILQMATSSRSESLATSTQGEENELD--YKLDDPYLDSQPI
                        S SES ++S Q +E ++D  Y LDDP+LDS+P+
Subjt:  TTSDADFQRILQMATSSRSESLATSTQGEENELD--YKLDDPYLDSQPI

TrEMBL top hitse value%identityAlignment
A0A5A7TIF4 Uncharacterized protein1.5e-2251.01Show/hide
Query:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQ
        M+ADQYAMDL FT VTRS++RS   Q GS  ESST PPRPS NL+RPS G VQMRPP SP+S   SSTP P++YSQAV P KR  E + + SK       
Subjt:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQ

Query:  TTSDADFQRILQMATSSRSESLATSTQGEENELD--YKLDDPYLDSQPI
                        S SES ++S Q +E ++D  Y LDDP+L+S+P+
Subjt:  TTSDADFQRILQMATSSRSESLATSTQGEENELD--YKLDDPYLDSQPI

A0A5A7U8A0 Uncharacterized protein3.6e-3261.49Show/hide
Query:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQ
        M+ADQYAMDLGFT VTRSR+RS   + GS  ESST PP+PSTNL+RPSGGVVQMR P SP+S   SSTP P++YSQAV P+KR        SKLLAALAQ
Subjt:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQ

Query:  TTSDADFQRILQMATSSRSESLATSTQGEENE----LDYKLDDPYLDS
         T+DADFQR+L    ++ S S + S+  +E+E    L+Y LDDPYLDS
Subjt:  TTSDADFQRILQMATSSRSESLATSTQGEENE----LDYKLDDPYLDS

A0A5D3BI61 Uncharacterized protein6.1e-2445.5Show/hide
Query:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEK------------------
        M+ DQYAMDLG+T V +SR++S G    S MESST PPRPS NL+ P G V+QMR   SP+S   SST  P++YSQAV P+K                  
Subjt:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEK------------------

Query:  ---------------------RNVEFLNDKSKLLAALAQTTSDADFQRILQMA--TSSRSESLATSTQGEENELD--YKLDDPYLDSQP
                             +N +FLNDK K LAAL Q T DADFQR+L  A  TSS S+   +  Q +E ++D  Y LDDP+LDSQP
Subjt:  ---------------------RNVEFLNDKSKLLAALAQTTSDADFQRILQMA--TSSRSESLATSTQGEENELD--YKLDDPYLDSQP

A0A5D3BPD3 Uncharacterized protein3.7e-2152.08Show/hide
Query:  ADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQTT
        ADQYAM++GFT VTRSR+RS   + GS  ES+T PPRPS NL+ PS GVVQMRPP SP+S   SSTPS ++YSQAV P+KR V     KS     +    
Subjt:  ADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQTT

Query:  SDADFQRILQMATSSRSESLATSTQGEENELD--YKLDDPYLDS
         D   +   Q+  SS S+S ++S Q +E ++D  Y LDDP+LDS
Subjt:  SDADFQRILQMATSSRSESLATSTQGEENELD--YKLDDPYLDS

A0A5D3BUE2 Uncharacterized protein8.0e-2452.35Show/hide
Query:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQ
        M+ADQYAMDLGFT VTRSR+RS   Q GS  ESST PPRPS NL+RPS G VQMRPP SP+S   SSTP P++YSQAV P  R  E + + SK +     
Subjt:  MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQ

Query:  TTSDADFQRILQMATSSRSESLATSTQGEENELD--YKLDDPYLDSQPI
                        S SES ++S Q +E ++D  Y LDDP+LDS+P+
Subjt:  TTSDADFQRILQMATSSRSESLATSTQGEENELD--YKLDDPYLDSQPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCTGATCAATACGCTATGGATCTAGGGTTTACTCTGGTAACCCGTTCTAGAGCAAGGTCCGTCGGTACACAACCCGGATCGACCATGGAGTCATCTACTCCACC
TCCAAGGCCTTCGACCAATTTAGTTCGTCCTTCTGGTGGAGTTGTTCAAATGAGACCTCCTTTCTCACCTAATTCAAAGATAGGGTCATCAACCCCATCACCCTCTTCAT
ATTCTCAAGCGGTTATTCCTGAAAAGAGAAATGTCGAATTCCTAAATGACAAATCCAAACTTCTGGCAGCTCTTGCTCAGACGACCTCTGATGCAGACTTCCAAAGGATT
CTTCAAATGGCAACTTCCTCAAGAAGTGAATCTCTTGCTACTTCTACACAAGGAGAAGAGAACGAACTAGACTACAAACTGGATGATCCATATCTCGACTCACAACCCAT
CTTGATTTCGAACTTCTTGTCATCCTCTTGTACTATCGATCCTGATTCTAATTCTCTTTGCGGGCGTGTGACGAGGGTGTGTGGTTTGGCTAGACTATGGGAAGTCGCCA
CCGCTGCTCGAGCTCGTTCCACCGTCGCCCAGAACGACCCGCCGCCGTCGATCGCCAGCCTCCGGTGCGTCACTCTCTCTCGTCTCTTTCTCCCTCGGCCTCCCTCTCTC
TCTCTCTACTGTAGATCCCGTCGTGAACCGCCGCTCCTCTCCTCCGGTCACCATCTCGAACCGTCGCCGCCGTCGCGCCTGACGGTAAAGGCAAAGGTGTACAGAACGCG
TGACGGAATGTTGTTGGACGAGCCATGGATCTTCATAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGCTGATCAATACGCTATGGATCTAGGGTTTACTCTGGTAACCCGTTCTAGAGCAAGGTCCGTCGGTACACAACCCGGATCGACCATGGAGTCATCTACTCCACC
TCCAAGGCCTTCGACCAATTTAGTTCGTCCTTCTGGTGGAGTTGTTCAAATGAGACCTCCTTTCTCACCTAATTCAAAGATAGGGTCATCAACCCCATCACCCTCTTCAT
ATTCTCAAGCGGTTATTCCTGAAAAGAGAAATGTCGAATTCCTAAATGACAAATCCAAACTTCTGGCAGCTCTTGCTCAGACGACCTCTGATGCAGACTTCCAAAGGATT
CTTCAAATGGCAACTTCCTCAAGAAGTGAATCTCTTGCTACTTCTACACAAGGAGAAGAGAACGAACTAGACTACAAACTGGATGATCCATATCTCGACTCACAACCCAT
CTTGATTTCGAACTTCTTGTCATCCTCTTGTACTATCGATCCTGATTCTAATTCTCTTTGCGGGCGTGTGACGAGGGTGTGTGGTTTGGCTAGACTATGGGAAGTCGCCA
CCGCTGCTCGAGCTCGTTCCACCGTCGCCCAGAACGACCCGCCGCCGTCGATCGCCAGCCTCCGGTGCGTCACTCTCTCTCGTCTCTTTCTCCCTCGGCCTCCCTCTCTC
TCTCTCTACTGTAGATCCCGTCGTGAACCGCCGCTCCTCTCCTCCGGTCACCATCTCGAACCGTCGCCGCCGTCGCGCCTGACGGTAAAGGCAAAGGTGTACAGAACGCG
TGACGGAATGTTGTTGGACGAGCCATGGATCTTCATAGGATAG
Protein sequenceShow/hide protein sequence
MNADQYAMDLGFTLVTRSRARSVGTQPGSTMESSTPPPRPSTNLVRPSGGVVQMRPPFSPNSKIGSSTPSPSSYSQAVIPEKRNVEFLNDKSKLLAALAQTTSDADFQRI
LQMATSSRSESLATSTQGEENELDYKLDDPYLDSQPILISNFLSSSCTIDPDSNSLCGRVTRVCGLARLWEVATAARARSTVAQNDPPPSIASLRCVTLSRLFLPRPPSL
SLYCRSRREPPLLSSGHHLEPSPPSRLTVKAKVYRTRDGMLLDEPWIFIG