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Spg032244 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg032244
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationscaffold2:35953736..35956826
RNA-Seq ExpressionSpg032244
SyntenySpg032244
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058280.1 uncharacterized protein E6C27_scaffold274G006090 [Cucumis melo var. makuwa]1.8e-2349.07Show/hide
Query:  QPGNLWFFSR----FELQRRNQ------EVSCRVFENEEFDVPRGNRSSLQTGELDKT---------------VEIELPVPDTLPTSAESFRSSSSTW--
        +PG    FS      E+ + NQ      EV     EN +  +PRGNR SLQT ELDKT               V IELPVPD LPTSAES  S+SSTW  
Subjt:  QPGNLWFFSR----FELQRRNQ------EVSCRVFENEEFDVPRGNRSSLQTGELDKT---------------VEIELPVPDTLPTSAESFRSSSSTW--

Query:  -------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVT
                                 FNVSVGSTGIVRGDDVCWLHAVFRAK  GGPGGGVT
Subjt:  -------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVT

KAA0064296.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.5e-2251.75Show/hide
Query:  QPGNLWFFSR----FELQRRNQEVSCRVFENEEFDVPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESFRSSSSTW------
        +PG    FS      ++ + NQ++   + E+ +   PRGN+ SLQTGELDKT                 VEIEL VPDTLPTSAES+ S+SS +      
Subjt:  QPGNLWFFSR----FELQRRNQEVSCRVFENEEFDVPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESFRSSSSTW------

Query:  -----FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTCV
             FNVSVGSTGIVRGDDVC LH VFRAK AGGPGGGVT V
Subjt:  -----FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTCV

KAA0067117.1 hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa]4.8e-2452.63Show/hide
Query:  QEVSCRVFENEEFDVPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESFRSSSSTWFNVSV----------------------
        Q +  R+   E  ++PRGNRSSLQTGELDKT                 VEIELPVPDTLPTSAESF S+SSTW  +                        
Subjt:  QEVSCRVFENEEFDVPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESFRSSSSTWFNVSV----------------------

Query:  --GSTGIVRGDDVCWLHAVFRAKLAGGPGGGVT
          GS GIVRGDDVCWLH VFRAK+AGGPGGGVT
Subjt:  --GSTGIVRGDDVCWLHAVFRAKLAGGPGGGVT

TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]2.3e-2639.53Show/hide
Query:  EHFKERVKEEEEEEFRGLRLKKIGKSSCKASHCRI-----CVQPGNLWFFSR----FELQRRNQEVSCRVFENE--EFDV-PRGNRSSLQTGELDK----
        EHF+ERVK EEEEEFRGLRLKKIGKSSCKA+HCRI       +P     FS      E+Q+ NQ++   +   +  ++DV PRGNRSSLQTG+LDK    
Subjt:  EHFKERVKEEEEEEFRGLRLKKIGKSSCKASHCRI-----CVQPGNLWFFSR----FELQRRNQEVSCRVFENE--EFDV-PRGNRSSLQTGELDK----

Query:  ---------------------------------------------------------------------------TVEIELPVPDTLPTSAESFRSSSST
                                                                                   ++EIEL VPDTLPTSAES  S+SST
Subjt:  ---------------------------------------------------------------------------TVEIELPVPDTLPTSAESFRSSSST

Query:  WFNV-------------------SVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTCV
        W                       V S GIVR +DVCWLHAVFRAK+AGG GGGVT V
Subjt:  WFNV-------------------SVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTCV

TYK11835.1 uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa]4.0e-2358.82Show/hide
Query:  PRGNRSSLQTGELDKTV---------------EIELPVPDTLPTSAESFRSSSSTW---------------------------FNVSVGSTGIVRGDDVC
        PRGNR SLQTGELDKTV                IELPVPDTLPTSAES  S+SSTW                           FNVSVGSTGIVRGDDVC
Subjt:  PRGNRSSLQTGELDKTV---------------EIELPVPDTLPTSAESFRSSSSTW---------------------------FNVSVGSTGIVRGDDVC

Query:  WLHAVFRAKLAGGPGGGVT
        WLHAVFRAK  GGPGGGVT
Subjt:  WLHAVFRAKLAGGPGGGVT

TrEMBL top hitse value%identityAlignment
A0A5A7UT17 CCHC-type domain-containing protein8.8e-2449.07Show/hide
Query:  QPGNLWFFSR----FELQRRNQ------EVSCRVFENEEFDVPRGNRSSLQTGELDKT---------------VEIELPVPDTLPTSAESFRSSSSTW--
        +PG    FS      E+ + NQ      EV     EN +  +PRGNR SLQT ELDKT               V IELPVPD LPTSAES  S+SSTW  
Subjt:  QPGNLWFFSR----FELQRRNQ------EVSCRVFENEEFDVPRGNRSSLQTGELDKT---------------VEIELPVPDTLPTSAESFRSSSSTW--

Query:  -------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVT
                                 FNVSVGSTGIVRGDDVCWLHAVFRAK  GGPGGGVT
Subjt:  -------------------------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVT

A0A5A7VD33 Putative DNA/RNA polymerases superfamily protein7.4e-2351.75Show/hide
Query:  QPGNLWFFSR----FELQRRNQEVSCRVFENEEFDVPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESFRSSSSTW------
        +PG    FS      ++ + NQ++   + E+ +   PRGN+ SLQTGELDKT                 VEIEL VPDTLPTSAES+ S+SS +      
Subjt:  QPGNLWFFSR----FELQRRNQEVSCRVFENEEFDVPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESFRSSSSTW------

Query:  -----FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTCV
             FNVSVGSTGIVRGDDVC LH VFRAK AGGPGGGVT V
Subjt:  -----FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTCV

A0A5A7VIY9 Uncharacterized protein2.3e-2452.63Show/hide
Query:  QEVSCRVFENEEFDVPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESFRSSSSTWFNVSV----------------------
        Q +  R+   E  ++PRGNRSSLQTGELDKT                 VEIELPVPDTLPTSAESF S+SSTW  +                        
Subjt:  QEVSCRVFENEEFDVPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESFRSSSSTWFNVSV----------------------

Query:  --GSTGIVRGDDVCWLHAVFRAKLAGGPGGGVT
          GS GIVRGDDVCWLH VFRAK+AGGPGGGVT
Subjt:  --GSTGIVRGDDVCWLHAVFRAKLAGGPGGGVT

A0A5D3CAC6 Uncharacterized protein1.1e-2639.53Show/hide
Query:  EHFKERVKEEEEEEFRGLRLKKIGKSSCKASHCRI-----CVQPGNLWFFSR----FELQRRNQEVSCRVFENE--EFDV-PRGNRSSLQTGELDK----
        EHF+ERVK EEEEEFRGLRLKKIGKSSCKA+HCRI       +P     FS      E+Q+ NQ++   +   +  ++DV PRGNRSSLQTG+LDK    
Subjt:  EHFKERVKEEEEEEFRGLRLKKIGKSSCKASHCRI-----CVQPGNLWFFSR----FELQRRNQEVSCRVFENE--EFDV-PRGNRSSLQTGELDK----

Query:  ---------------------------------------------------------------------------TVEIELPVPDTLPTSAESFRSSSST
                                                                                   ++EIEL VPDTLPTSAES  S+SST
Subjt:  ---------------------------------------------------------------------------TVEIELPVPDTLPTSAESFRSSSST

Query:  WFNV-------------------SVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTCV
        W                       V S GIVR +DVCWLHAVFRAK+AGG GGGVT V
Subjt:  WFNV-------------------SVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTCV

A0A5D3CJX3 CCHC-type domain-containing protein2.0e-2358.82Show/hide
Query:  PRGNRSSLQTGELDKTV---------------EIELPVPDTLPTSAESFRSSSSTW---------------------------FNVSVGSTGIVRGDDVC
        PRGNR SLQTGELDKTV                IELPVPDTLPTSAES  S+SSTW                           FNVSVGSTGIVRGDDVC
Subjt:  PRGNRSSLQTGELDKTV---------------EIELPVPDTLPTSAESFRSSSSTW---------------------------FNVSVGSTGIVRGDDVC

Query:  WLHAVFRAKLAGGPGGGVT
        WLHAVFRAK  GGPGGGVT
Subjt:  WLHAVFRAKLAGGPGGGVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGACTGAGGACTACGGAGATGTGGAGAGTTGACGACGTGAGAGATCGCAGAGGGGAGGGAAGCCGAAGGGTGCTTAATCCTGAATGGAAAAGGGGTTTGAGAGA
TGGGAAAAATCGAGGGAGAAAGGAGCACTTTAAGGAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGGAAAAGCTCATGCAAAG
CCAGCCATTGCAGAATCTGTGTTCAACCTGGCAACCTCTGGTTTTTTAGTCGGTTTGAGCTACAAAGAAGAAATCAAGAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAG
TTTGATGTGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACATTGCCAACGTCTGCTGAAAGTTT
TAGATCAAGCTCCAGTACGTGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCTGTCTTTCGGGCTAAGCTAGCAGGTG
GTCCGGGAGGGGGTGTGACATGTGTTCTGAACCCTGGGAATCAGAAAACAGTGTTTGAGGTGCTGTGTTCTGAACCCTTGGAATCAGAAAATAGTGTTTGGGGTGCTGTG
CTGTGTTCTGAACCCTGGGATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGACTGAGGACTACGGAGATGTGGAGAGTTGACGACGTGAGAGATCGCAGAGGGGAGGGAAGCCGAAGGGTGCTTAATCCTGAATGGAAAAGGGGTTTGAGAGA
TGGGAAAAATCGAGGGAGAAAGGAGCACTTTAAGGAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGGAAAAGCTCATGCAAAG
CCAGCCATTGCAGAATCTGTGTTCAACCTGGCAACCTCTGGTTTTTTAGTCGGTTTGAGCTACAAAGAAGAAATCAAGAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAG
TTTGATGTGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACATTGCCAACGTCTGCTGAAAGTTT
TAGATCAAGCTCCAGTACGTGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCTGTCTTTCGGGCTAAGCTAGCAGGTG
GTCCGGGAGGGGGTGTGACATGTGTTCTGAACCCTGGGAATCAGAAAACAGTGTTTGAGGTGCTGTGTTCTGAACCCTTGGAATCAGAAAATAGTGTTTGGGGTGCTGTG
CTGTGTTCTGAACCCTGGGATATTTGA
Protein sequenceShow/hide protein sequence
MVGLRTTEMWRVDDVRDRRGEGSRRVLNPEWKRGLRDGKNRGRKEHFKERVKEEEEEEFRGLRLKKIGKSSCKASHCRICVQPGNLWFFSRFELQRRNQEVSCRVFENEE
FDVPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESFRSSSSTWFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTCVLNPGNQKTVFEVLCSEPLESENSVWGAV
LCSEPWDI